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Cow genome map

           
Conread name:
           
Ss1.1-Pig3-SRG8025P15.3
        

               
Conread position:
               
133-416
               

               
Cow position:
               
chr4:45871613-45871902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 70
               

               
Conread position:
               
175-522
               

               
Cow position:
               
chr4:52088138-52087788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
190-413
               

               
Cow position:
               
chr4:44279739-44279969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
190-659
               

               
Cow position:
               
chr4:41185735-41186187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
192-625
               

               
Cow position:
               
chr4:13693463-13693931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 241
               

               
Conread position:
               
192-632
               

               
Cow position:
               
chr4:59055661-59056097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
192-648
               

               
Cow position:
               
chr4:54938094-54937612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
20, 115
               

               
Conread position:
               
192-654
               

               
Cow position:
               
chr4:15624049-15623564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 53
               

               
Conread position:
               
192-661
               

               
Cow position:
               
chr4:4084245-4084733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
17, 234
               

               
Conread position:
               
193-602
               

               
Cow position:
               
chr4:36945002-36945419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 244
               

               
Conread position:
               
193-648
               

               
Cow position:
               
chr4:20327511-20327989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
6, 39
               

               
Conread position:
               
193-659
               

               
Cow position:
               
chr4:58857985-58858440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
194-328
               

               
Cow position:
               
chr4:392665-392530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 129
               

               
Conread position:
               
194-648
               

               
Cow position:
               
chr4:11871724-11872186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
25, 31
               

               
Conread position:
               
195-584
               

               
Cow position:
               
chr4:36929501-36929104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
195-585
               

               
Cow position:
               
chr4:29384033-29384429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 116
               

               
Conread position:
               
195-648
               

               
Cow position:
               
chr4:12591011-12591485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
195-651
               

               
Cow position:
               
chr4:3440602-3440129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 232
               

               
Conread position:
               
197-631
               

               
Cow position:
               
chr4:54146287-54146732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 44
               

               
Conread position:
               
197-663
               

               
Cow position:
               
chr4:11021475-11021940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
198-646
               

               
Cow position:
               
chr4:44496568-44496112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 114
               

               
Conread position:
               
199-674
               

               
Cow position:
               
chr4:19745075-19744587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
200-373
               

               
Cow position:
               
chr4:63417518-63417690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
84, 50
               

               
Conread position:
               
200-382
               

               
Cow position:
               
chr4:10836361-10836174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
200-413
               

               
Cow position:
               
chr4:17304205-17304426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
201-393
               

               
Cow position:
               
chr4:24433163-24432966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
201-498
               

               
Cow position:
               
chr4:5580741-5580436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
201-607
               

               
Cow position:
               
chr4:9548136-9547747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
201-611
               

               
Cow position:
               
chr4:14551009-14550614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 30
               

               
Conread position:
               
201-646
               

               
Cow position:
               
chr4:37935100-37935553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
202-632
               

               
Cow position:
               
chr4:49794851-49794421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
202-646
               

               
Cow position:
               
chr4:23646671-23647115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
203-416
               

               
Cow position:
               
chr4:37035053-37035270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
74, 212
               

               
Conread position:
               
203-480
               

               
Cow position:
               
chr4:5913164-5913443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
72, 216
               

               
Conread position:
               
203-637
               

               
Cow position:
               
chr4:26373498-26373933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
204-331
               

               
Cow position:
               
chr4:21037559-21037688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
204-366
               

               
Cow position:
               
chr4:27561722-27561555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
108, 46
               

               
Conread position:
               
204-388
               

               
Cow position:
               
chr4:17478125-17478303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
80, 41
               

               
Conread position:
               
204-429
               

               
Cow position:
               
chr4:9800183-9799960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
77, 198
               

               
Conread position:
               
204-533
               

               
Cow position:
               
chr4:33091550-33091221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
204-538
               

               
Cow position:
               
chr4:23167078-23166741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
204-539
               

               
Cow position:
               
chr4:30671234-30671569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 151
               

               
Conread position:
               
204-543
               

               
Cow position:
               
chr4:10837201-10837548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 140
               

               
Conread position:
               
204-621
               

               
Cow position:
               
chr4:13406873-13406459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
204-621
               

               
Cow position:
               
chr4:29291705-29291276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 107
               

               
Conread position:
               
204-632
               

               
Cow position:
               
chr4:6208636-6208213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
204-634
               

               
Cow position:
               
chr4:12676994-12676553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
69, 227
               

               
Conread position:
               
204-637
               

               
Cow position:
               
chr4:961466-961926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 101
               

               
Conread position:
               
204-645
               

               
Cow position:
               
chr4:58834218-58834677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
204-647
               

               
Cow position:
               
chr4:68387977-68387519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 237
               

               
Conread position:
               
204-654
               

               
Cow position:
               
chr4:2121218-2121678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 209
               

               
Conread position:
               
204-719
               

               
Cow position:
               
chr4:10992020-10992546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 202
               

               
Conread position:
               
205-411
               

               
Cow position:
               
chr4:65604295-65604499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
163, 44
               

               
Conread position:
               
205-459
               

               
Cow position:
               
chr4:5002936-5002689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
205-632
               

               
Cow position:
               
chr4:63095901-63096333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 53
               

               
Conread position:
               
205-638
               

               
Cow position:
               
chr4:2610400-2609974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 89
               

               
Conread position:
               
205-638
               

               
Cow position:
               
chr4:18439396-18439837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 44
               

               
Conread position:
               
205-642
               

               
Cow position:
               
chr4:2141907-2141478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
103, 36
               

               
Conread position:
               
205-646
               

               
Cow position:
               
chr4:12049422-12048973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
205-646
               

               
Cow position:
               
chr4:17378666-17379090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
72, 115
               

               
Conread position:
               
205-648
               

               
Cow position:
               
chr4:51728272-51727809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
72, 170
               

               
Conread position:
               
205-661
               

               
Cow position:
               
chr4:16238971-16239422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 87
               

               
Conread position:
               
205-661
               

               
Cow position:
               
chr4:52748264-52748747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
48, 142
               

               
Conread position:
               
205-710
               

               
Cow position:
               
chr4:19314185-19313661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
206-363
               

               
Cow position:
               
chr4:34762157-34762313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 61
               

               
Conread position:
               
206-377
               

               
Cow position:
               
chr4:2169247-2169070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
206-473
               

               
Cow position:
               
chr4:60031082-60030817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
206-545
               

               
Cow position:
               
chr4:23758981-23758634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
206-549
               

               
Cow position:
               
chr4:22235504-22235171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
206-623
               

               
Cow position:
               
chr4:12561216-12560787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
206-629
               

               
Cow position:
               
chr4:35870382-35869960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
206-638
               

               
Cow position:
               
chr4:40822933-40823379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 236
               

               
Conread position:
               
206-640
               

               
Cow position:
               
chr4:62412031-62411608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 168
               

               
Conread position:
               
206-646
               

               
Cow position:
               
chr4:49001132-49001573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 102
               

               
Conread position:
               
206-647
               

               
Cow position:
               
chr4:25370291-25369843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
56, 136
               

               
Conread position:
               
206-649
               

               
Cow position:
               
chr4:53208481-53208026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 264
               

               
Conread position:
               
206-650
               

               
Cow position:
               
chr4:31136952-31136479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
206-660
               

               
Cow position:
               
chr4:51123250-51122771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 252
               

               
Conread position:
               
206-661
               

               
Cow position:
               
chr4:24187423-24187904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
206-695
               

               
Cow position:
               
chr4:21072976-21073477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
207-331
               

               
Cow position:
               
chr4:10463749-10463874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
207-416
               

               
Cow position:
               
chr4:58576186-58576398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
10, 151
               

               
Conread position:
               
207-460
               

               
Cow position:
               
chr4:22449344-22449595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
70, 141
               

               
Conread position:
               
207-592
               

               
Cow position:
               
chr4:39767527-39767128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 105
               

               
Conread position:
               
207-643
               

               
Cow position:
               
chr4:35471495-35471063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 186
               

               
Conread position:
               
207-645
               

               
Cow position:
               
chr4:45919211-45918760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 390
               

               
Conread position:
               
207-646
               

               
Cow position:
               
chr4:27997872-27997412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 244
               

               
Conread position:
               
207-646
               

               
Cow position:
               
chr4:28151706-28151257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 229
               

               
Conread position:
               
207-648
               

               
Cow position:
               
chr4:19597136-19597587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
207-648
               

               
Cow position:
               
chr4:28377497-28377923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 92
               

               
Conread position:
               
207-658
               

               
Cow position:
               
chr4:52226181-52225725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 190
               

               
Conread position:
               
208-331
               

               
Cow position:
               
chr4:3630626-3630502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
208-363
               

               
Cow position:
               
chr4:45115602-45115758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
208-457
               

               
Cow position:
               
chr4:184464-184219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 114
               

               
Conread position:
               
208-482
               

               
Cow position:
               
chr4:28065573-28065847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
151, 41
               

               
Conread position:
               
208-496
               

               
Cow position:
               
chr4:53752705-53752408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 231
               

               
Conread position:
               
208-542
               

               
Cow position:
               
chr4:51605443-51605774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
208-620
               

               
Cow position:
               
chr4:41603019-41602604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
208-640
               

               
Cow position:
               
chr4:58706998-58707449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 116
               

               
Conread position:
               
208-645
               

               
Cow position:
               
chr4:7704145-7704578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 226
               

               
Conread position:
               
208-646
               

               
Cow position:
               
chr4:36813553-36813100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 38
               

               
Conread position:
               
208-646
               

               
Cow position:
               
chr4:44665195-44665639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 196
               

               
Conread position:
               
208-648
               

               
Cow position:
               
chr4:22528211-22528661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 23
               

               
Conread position:
               
208-656
               

               
Cow position:
               
chr4:20279499-20279056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 37
               

               
Conread position:
               
208-692
               

               
Cow position:
               
chr4:33970710-33971218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
208-696
               

               
Cow position:
               
chr4:23600349-23599848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
209-366
               

               
Cow position:
               
chr4:20161306-20161466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
209-480
               

               
Cow position:
               
chr4:29709584-29709864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 226
               

               
Conread position:
               
209-587
               

               
Cow position:
               
chr4:9681485-9681089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
209-628
               

               
Cow position:
               
chr4:27371689-27372110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 40
               

               
Conread position:
               
209-638
               

               
Cow position:
               
chr4:22249274-22249707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 43
               

               
Conread position:
               
209-640
               

               
Cow position:
               
chr4:25973074-25972633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
209-647
               

               
Cow position:
               
chr4:23495084-23494660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 36
               

               
Conread position:
               
209-674
               

               
Cow position:
               
chr4:21371556-21371103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
148, 44
               

               
Conread position:
               
210-582
               

               
Cow position:
               
chr4:36075598-36075968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
210-601
               

               
Cow position:
               
chr4:22860534-22860932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
210-633
               

               
Cow position:
               
chr4:30131510-30131102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
210-648
               

               
Cow position:
               
chr4:21065218-21064765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 223
               

               
Conread position:
               
211-334
               

               
Cow position:
               
chr4:9912154-9912274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
211-382
               

               
Cow position:
               
chr4:21151769-21151600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
138, 92
               

               
Conread position:
               
211-429
               

               
Cow position:
               
chr4:38877941-38877713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
211-431
               

               
Cow position:
               
chr4:1800079-1799859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
211-480
               

               
Cow position:
               
chr4:21249854-21250127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
211-574
               

               
Cow position:
               
chr4:50769593-50769968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
212-386
               

               
Cow position:
               
chr4:51433583-51433404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
212-402
               

               
Cow position:
               
chr4:24755736-24755546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
71, 112
               

               
Conread position:
               
212-455
               

               
Cow position:
               
chr4:3267697-3267934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
212-530
               

               
Cow position:
               
chr4:2596699-2597021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
64, 251
               

               
Conread position:
               
212-570
               

               
Cow position:
               
chr4:17774174-17774546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
212-646
               

               
Cow position:
               
chr4:56570982-56570533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
212-648
               

               
Cow position:
               
chr4:23311097-23311534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 93
               

               
Conread position:
               
212-656
               

               
Cow position:
               
chr4:22115779-22115324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 209
               

               
Conread position:
               
213-521
               

               
Cow position:
               
chr4:37881103-37880786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
215-488
               

               
Cow position:
               
chr4:40433736-40434009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
144, 34
               

               
Conread position:
               
215-632
               

               
Cow position:
               
chr4:31172842-31172408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 115
               

               
Conread position:
               
215-658
               

               
Cow position:
               
chr4:45234702-45235144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 87
               

               
Conread position:
               
215-666
               

               
Cow position:
               
chr4:12697799-12697356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr4:24415722-24415535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
216-524
               

               
Cow position:
               
chr4:48409098-48409415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 215
               

               
Conread position:
               
217-621
               

               
Cow position:
               
chr4:65841605-65842008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
217-631
               

               
Cow position:
               
chr4:1374521-1374132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
111, 22
               

               
Conread position:
               
217-640
               

               
Cow position:
               
chr4:6442920-6443346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 135
               

               
Conread position:
               
217-646
               

               
Cow position:
               
chr4:8801675-8801233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 141
               

               
Conread position:
               
218-647
               

               
Cow position:
               
chr4:19307421-19306983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
218-648
               

               
Cow position:
               
chr4:65406210-65406634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
220-623
               

               
Cow position:
               
chr4:58880798-58881215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 7
               

               
Conread position:
               
220-648
               

               
Cow position:
               
chr4:44782540-44782100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
221-640
               

               
Cow position:
               
chr4:22842515-22842082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 226
               

               
Conread position:
               
223-340
               

               
Cow position:
               
chr4:37611127-37611242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
223-421
               

               
Cow position:
               
chr4:64070913-64071110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 129
               

               
Conread position:
               
223-507
               

               
Cow position:
               
chr4:30478-30771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 19
               

               
Conread position:
               
223-661
               

               
Cow position:
               
chr4:21365564-21365127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 80
               

               
Conread position:
               
224-365
               

               
Cow position:
               
chr4:7315375-7315232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
224-647
               

               
Cow position:
               
chr4:5798125-5797694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
226-383
               

               
Cow position:
               
chr4:59719758-59719608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
226-422
               

               
Cow position:
               
chr4:21862711-21862908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 162
               

               
Conread position:
               
226-491
               

               
Cow position:
               
chr4:20066063-20066328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
133, 77
               

               
Conread position:
               
226-637
               

               
Cow position:
               
chr4:68795138-68795568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
226-646
               

               
Cow position:
               
chr4:21874963-21874562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
228-631
               

               
Cow position:
               
chr4:45367900-45367479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
228-638
               

               
Cow position:
               
chr4:65116037-65116475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
229-647
               

               
Cow position:
               
chr4:243387-242953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 208
               

               
Conread position:
               
230-648
               

               
Cow position:
               
chr4:23450942-23451370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
233-604
               

               
Cow position:
               
chr4:16762575-16762961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
234-609
               

               
Cow position:
               
chr4:2602378-2601995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 36
               

               
Conread position:
               
236-585
               

               
Cow position:
               
chr4:45952242-45952584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 5
               

               
Conread position:
               
238-656
               

               
Cow position:
               
chr4:34337129-34337544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
240-640
               

               
Cow position:
               
chr4:25197354-25197763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
243-661
               

               
Cow position:
               
chr4:40622960-40623372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 184
               

               
Conread position:
               
247-648
               

               
Cow position:
               
chr4:508771-509172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
249-646
               

               
Cow position:
               
chr4:59332852-59333244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
249-648
               

               
Cow position:
               
chr4:18974559-18974163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
250-637
               

               
Cow position:
               
chr4:23444912-23445314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
250-647
               

               
Cow position:
               
chr4:22138091-22138509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 14
               

               
Conread position:
               
251-611
               

               
Cow position:
               
chr4:7808705-7808346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 5
               

               
Conread position:
               
251-656
               

               
Cow position:
               
chr4:46591803-46591380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
13, 165
               

               
Conread position:
               
251-671
               

               
Cow position:
               
chr4:41867569-41867144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
256-640
               

               
Cow position:
               
chr4:19542260-19541860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
256-641
               

               
Cow position:
               
chr4:45644192-45644580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
256-656
               

               
Cow position:
               
chr4:48499945-48499566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
257-541
               

               
Cow position:
               
chr4:19500968-19501250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
50, 12
               

               
Conread position:
               
257-628
               

               
Cow position:
               
chr4:12700213-12700602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
8, 130
               

               
Conread position:
               
257-648
               

               
Cow position:
               
chr4:9846041-9845650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
258-656
               

               
Cow position:
               
chr4:61624458-61624872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
259-642
               

               
Cow position:
               
chr4:36893483-36893085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 10
               

               
Conread position:
               
259-645
               

               
Cow position:
               
chr4:53100927-53100535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
262-618
               

               
Cow position:
               
chr4:37502938-37502578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
263-640
               

               
Cow position:
               
chr4:570914-570534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
263-646
               

               
Cow position:
               
chr4:42423685-42424073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
263-655
               

               
Cow position:
               
chr4:23509715-23509308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
273-638
               

               
Cow position:
               
chr4:32726336-32725960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
55, 164
               

               
Conread position:
               
274-498
               

               
Cow position:
               
chr4:12996066-12995845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
184, 78
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr4:25906229-25906595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 82
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr4:27755192-27755579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
11, 158
               

               
Conread position:
               
274-646
               

               
Cow position:
               
chr4:65815597-65815964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
274-649
               

               
Cow position:
               
chr4:19097398-19097017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
55, 126
               

               
Conread position:
               
274-656
               

               
Cow position:
               
chr4:3837386-3836994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
275-585
               

               
Cow position:
               
chr4:48322143-48321818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
276-611
               

               
Cow position:
               
chr4:20090492-20090806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
276-639
               

               
Cow position:
               
chr4:34641618-34641994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
52, 26
               

               
Conread position:
               
276-640
               

               
Cow position:
               
chr4:3850660-3850287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
276-641
               

               
Cow position:
               
chr4:23846943-23847318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
276-643
               

               
Cow position:
               
chr4:44451629-44451261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
278-614
               

               
Cow position:
               
chr4:6653828-6653496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
30, 16
               

               
Conread position:
               
278-630
               

               
Cow position:
               
chr4:20157310-20157669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 57
               

               
Conread position:
               
278-642
               

               
Cow position:
               
chr4:65650027-65650393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
278-647
               

               
Cow position:
               
chr4:38999531-38999154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
28, 200
               

               
Conread position:
               
278-699
               

               
Cow position:
               
chr4:34310353-34310780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
279-459
               

               
Cow position:
               
chr4:19728999-19729173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
279-521
               

               
Cow position:
               
chr4:24497724-24497963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
204, 134
               

               
Conread position:
               
279-584
               

               
Cow position:
               
chr4:68635054-68634754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
176, 33
               

               
Conread position:
               
279-597
               

               
Cow position:
               
chr4:5553691-5554015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
182, 76
               

               
Conread position:
               
279-599
               

               
Cow position:
               
chr4:13222081-13222400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
279-613
               

               
Cow position:
               
chr4:21259318-21258979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 50
               

               
Conread position:
               
279-616
               

               
Cow position:
               
chr4:63459117-63459457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
49, 175
               

               
Conread position:
               
279-620
               

               
Cow position:
               
chr4:26659406-26659060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-621
               

               
Cow position:
               
chr4:11897200-11897545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-621
               

               
Cow position:
               
chr4:21531538-21531887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
49, 156
               

               
Conread position:
               
279-622
               

               
Cow position:
               
chr4:1495303-1495647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 123
               

               
Conread position:
               
279-630
               

               
Cow position:
               
chr4:24371755-24372107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
279-631
               

               
Cow position:
               
chr4:25879496-25879139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-631
               

               
Cow position:
               
chr4:45583017-45583385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr4:10732329-10731961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-632
               

               
Cow position:
               
chr4:58248507-58248150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
279-637
               

               
Cow position:
               
chr4:41300892-41301254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
279-637
               

               
Cow position:
               
chr4:66547662-66548016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr4:39128643-39128263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-640
               

               
Cow position:
               
chr4:60897177-60897539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-642
               

               
Cow position:
               
chr4:26401061-26400689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-644
               

               
Cow position:
               
chr4:35930550-35930159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 117
               

               
Conread position:
               
279-645
               

               
Cow position:
               
chr4:54191195-54190829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-645
               

               
Cow position:
               
chr4:59834031-59833669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 66
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:15905208-15904826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:18095568-18095948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:18255956-18255592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:36731295-36730918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:45738369-45738754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:46476840-46477211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-646
               

               
Cow position:
               
chr4:59888516-59888870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 76
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:13668516-13668890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 26
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:19435361-19434987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
49, 136
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:23381713-23382079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:32259737-32260121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:43865751-43866125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:44838789-44839159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:45662407-45662774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:45775232-45775615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:59785428-59785042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
279-648
               

               
Cow position:
               
chr4:61304308-61304698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 76
               

               
Conread position:
               
279-649
               

               
Cow position:
               
chr4:10968283-10968659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
279-650
               

               
Cow position:
               
chr4:34210139-34209752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
279-650
               

               
Cow position:
               
chr4:42481287-42480911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
279-651
               

               
Cow position:
               
chr4:27276438-27276818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
49, 125
               

               
Conread position:
               
279-653
               

               
Cow position:
               
chr4:56239754-56240124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
49, 152
               

               
Conread position:
               
279-658
               

               
Cow position:
               
chr4:58947816-58948200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
279-659
               

               
Cow position:
               
chr4:28771961-28772352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
49, 131
               

               
Conread position:
               
279-659
               

               
Cow position:
               
chr4:51784285-51783895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
279-661
               

               
Cow position:
               
chr4:23065675-23066057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
279-661
               

               
Cow position:
               
chr4:25888729-25889120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
279-661
               

               
Cow position:
               
chr4:27530224-27529826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
279-661
               

               
Cow position:
               
chr4:29805268-29805645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
279-661
               

               
Cow position:
               
chr4:46082801-46083183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 76
               

               
Conread position:
               
279-753
               

               
Cow position:
               
chr4:19321972-19322457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 22
               

               
Conread position:
               
280-568
               

               
Cow position:
               
chr4:13344643-13344353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
280-580
               

               
Cow position:
               
chr4:16594187-16593878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
280-626
               

               
Cow position:
               
chr4:63964886-63965243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
280-642
               

               
Cow position:
               
chr4:46597473-46597115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
280-648
               

               
Cow position:
               
chr4:41441671-41441291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
28, 194
               

               
Conread position:
               
280-649
               

               
Cow position:
               
chr4:48152271-48152644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 5
               

               
Conread position:
               
280-661
               

               
Cow position:
               
chr4:5460757-5461140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 14
               

               
Conread position:
               
281-632
               

               
Cow position:
               
chr4:12913703-12914059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
285-545
               

               
Cow position:
               
chr4:27344579-27344841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
288-581
               

               
Cow position:
               
chr4:51769200-51768906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
288-607
               

               
Cow position:
               
chr4:58833123-58833450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
30, 5
               

               
Conread position:
               
288-649
               

               
Cow position:
               
chr4:62771822-62772210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
289-640
               

               
Cow position:
               
chr4:28399317-28399673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
39, 148
               

               
Conread position:
               
290-647
               

               
Cow position:
               
chr4:17111779-17112150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
290-660
               

               
Cow position:
               
chr4:488329-488726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
292-617
               

               
Cow position:
               
chr4:65432244-65431903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 132
               

               
Conread position:
               
293-648
               

               
Cow position:
               
chr4:12004307-12003949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 127
               

               
Conread position:
               
294-592
               

               
Cow position:
               
chr4:38935449-38935141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
294-628
               

               
Cow position:
               
chr4:54455252-54455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-632
               

               
Cow position:
               
chr4:62983471-62983811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 54
               

               
Conread position:
               
294-633
               

               
Cow position:
               
chr4:42921769-42922105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
294-638
               

               
Cow position:
               
chr4:19315916-19316261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
14, 123
               

               
Conread position:
               
294-638
               

               
Cow position:
               
chr4:55395852-55395504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
294-640
               

               
Cow position:
               
chr4:13326864-13327224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 156
               

               
Conread position:
               
294-640
               

               
Cow position:
               
chr4:65919699-65919352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-641
               

               
Cow position:
               
chr4:34630989-34630635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 7
               

               
Conread position:
               
294-646
               

               
Cow position:
               
chr4:6792529-6792170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
294-648
               

               
Cow position:
               
chr4:48961395-48961764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
294-656
               

               
Cow position:
               
chr4:36755830-36755467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 9
               

               
Conread position:
               
294-656
               

               
Cow position:
               
chr4:44613095-44612721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
294-661
               

               
Cow position:
               
chr4:33395607-33395975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
294-661
               

               
Cow position:
               
chr4:47348917-47348546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
295-568
               

               
Cow position:
               
chr4:8597603-8597887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 105
               

               
Conread position:
               
295-628
               

               
Cow position:
               
chr4:33564927-33564611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
81, 60
               

               
Conread position:
               
295-631
               

               
Cow position:
               
chr4:51407886-51408222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
295-631
               

               
Cow position:
               
chr4:59008265-59008626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
33, 302
               

               
Conread position:
               
295-637
               

               
Cow position:
               
chr4:53763038-53763382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
159, 20
               

               
Conread position:
               
295-639
               

               
Cow position:
               
chr4:5188923-5189262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
295-658
               

               
Cow position:
               
chr4:9168576-9168931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
295-704
               

               
Cow position:
               
chr4:33433166-33433588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
33, 138
               

               
Conread position:
               
296-602
               

               
Cow position:
               
chr4:31586738-31587034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
296-614
               

               
Cow position:
               
chr4:53554356-53554056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
250, 69
               

               
Conread position:
               
296-656
               

               
Cow position:
               
chr4:33030638-33030279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 139
               

               
Conread position:
               
298-661
               

               
Cow position:
               
chr4:62618603-62618230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
299-513
               

               
Cow position:
               
chr4:12667267-12667478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
44, 106
               

               
Conread position:
               
299-632
               

               
Cow position:
               
chr4:3283360-3283707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
299-644
               

               
Cow position:
               
chr4:3341039-3340681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
299-647
               

               
Cow position:
               
chr4:38952640-38952286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
299-648
               

               
Cow position:
               
chr4:11194272-11193908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
299-648
               

               
Cow position:
               
chr4:37915249-37915603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
299-649
               

               
Cow position:
               
chr4:21391725-21392079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
299-657
               

               
Cow position:
               
chr4:20139430-20139802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 42
               

               
Conread position:
               
299-711
               

               
Cow position:
               
chr4:30974420-30973998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
300-548
               

               
Cow position:
               
chr4:27632528-27632280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 105
               

               
Conread position:
               
300-649
               

               
Cow position:
               
chr4:24744320-24744688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
10, 159
               

               
Conread position:
               
301-647
               

               
Cow position:
               
chr4:7571497-7571136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 104
               

               
Conread position:
               
303-577
               

               
Cow position:
               
chr4:31634490-31634766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
15, 54
               

               
Conread position:
               
303-624
               

               
Cow position:
               
chr4:57652321-57652003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
303-629
               

               
Cow position:
               
chr4:58433137-58433466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
15, 107
               

               
Conread position:
               
303-638
               

               
Cow position:
               
chr4:15283448-15283099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
303-660
               

               
Cow position:
               
chr4:45114526-45114892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
303-660
               

               
Cow position:
               
chr4:69509377-69509011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
303-661
               

               
Cow position:
               
chr4:6630211-6630578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 102
               

               
Conread position:
               
305-457
               

               
Cow position:
               
chr4:48283202-48283353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
123, 129
               

               
Conread position:
               
305-637
               

               
Cow position:
               
chr4:31004329-31004667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
305-640
               

               
Cow position:
               
chr4:65179069-65179397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
305-646
               

               
Cow position:
               
chr4:16601983-16602323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
305-648
               

               
Cow position:
               
chr4:16799106-16799466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 125
               

               
Conread position:
               
305-648
               

               
Cow position:
               
chr4:17474519-17474163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 176
               

               
Conread position:
               
305-648
               

               
Cow position:
               
chr4:22344942-22345289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 108
               

               
Conread position:
               
305-648
               

               
Cow position:
               
chr4:40414548-40414905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 105
               

               
Conread position:
               
305-649
               

               
Cow position:
               
chr4:10915756-10916112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 141
               

               
Conread position:
               
305-654
               

               
Cow position:
               
chr4:14942388-14942038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
25, 109
               

               
Conread position:
               
305-661
               

               
Cow position:
               
chr4:3274479-3274821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 97
               

               
Conread position:
               
306-567
               

               
Cow position:
               
chr4:47511100-47510825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 131
               

               
Conread position:
               
306-612
               

               
Cow position:
               
chr4:58801930-58802236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
306-621
               

               
Cow position:
               
chr4:21232795-21233117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
22, 101
               

               
Conread position:
               
306-645
               

               
Cow position:
               
chr4:59871554-59871227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
307-609
               

               
Cow position:
               
chr4:52597398-52597716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 98
               

               
Conread position:
               
307-682
               

               
Cow position:
               
chr4:5999118-5999501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
21, 9
               

               
Conread position:
               
308-506
               

               
Cow position:
               
chr4:33667272-33667073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
308-607
               

               
Cow position:
               
chr4:3133335-3133039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 102
               

               
Conread position:
               
309-648
               

               
Cow position:
               
chr4:39231446-39231797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
309-656
               

               
Cow position:
               
chr4:54930346-54930698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
19, 102
               

               
Conread position:
               
312-454
               

               
Cow position:
               
chr4:46242046-46242191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
312-646
               

               
Cow position:
               
chr4:23854253-23853932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 103
               

               
Conread position:
               
312-656
               

               
Cow position:
               
chr4:51739644-51739985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
313-599
               

               
Cow position:
               
chr4:44973706-44973418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 96
               

               
Conread position:
               
313-656
               

               
Cow position:
               
chr4:32749270-32748913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
33, 174
               

               
Conread position:
               
313-666
               

               
Cow position:
               
chr4:5623130-5623488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
33, 117
               

               
Conread position:
               
314-633
               

               
Cow position:
               
chr4:47730929-47730603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 95
               

               
Conread position:
               
314-648
               

               
Cow position:
               
chr4:10703617-10703959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
314-649
               

               
Cow position:
               
chr4:9137350-9137002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
14, 101
               

               
Conread position:
               
314-654
               

               
Cow position:
               
chr4:19008117-19007764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
315-649
               

               
Cow position:
               
chr4:33612289-33612638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
316-545
               

               
Cow position:
               
chr4:15784741-15784979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
317-619
               

               
Cow position:
               
chr4:4186187-4185877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
18, 89
               

               
Conread position:
               
317-648
               

               
Cow position:
               
chr4:24001897-24002243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
317-649
               

               
Cow position:
               
chr4:48486062-48485718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
317-667
               

               
Cow position:
               
chr4:9822214-9821862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
323-427
               

               
Cow position:
               
chr4:10464147-10464250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
323-640
               

               
Cow position:
               
chr4:46550442-46550118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
5, 113
               

               
Conread position:
               
323-648
               

               
Cow position:
               
chr4:8947457-8947130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
324-641
               

               
Cow position:
               
chr4:34180548-34180858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 41
               

               
Conread position:
               
327-621
               

               
Cow position:
               
chr4:14414290-14414592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
121, 101
               

               
Conread position:
               
327-638
               

               
Cow position:
               
chr4:25806956-25806635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 65
               

               
Conread position:
               
327-647
               

               
Cow position:
               
chr4:13256139-13255821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
327-647
               

               
Cow position:
               
chr4:51899063-51898729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 57
               

               
Conread position:
               
327-648
               

               
Cow position:
               
chr4:42673233-42672897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
327-661
               

               
Cow position:
               
chr4:51867049-51866704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 99
               

               
Conread position:
               
328-646
               

               
Cow position:
               
chr4:53134652-53134339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
328-648
               

               
Cow position:
               
chr4:68362977-68362665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
330-640
               

               
Cow position:
               
chr4:47773587-47773898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
334-545
               

               
Cow position:
               
chr4:41154694-41154474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
334-639
               

               
Cow position:
               
chr4:38799151-38799457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
334-640
               

               
Cow position:
               
chr4:16339554-16339858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 83
               

               
Conread position:
               
334-647
               

               
Cow position:
               
chr4:14470520-14470841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 75
               

               
Conread position:
               
336-646
               

               
Cow position:
               
chr4:37827801-37828107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
341-647
               

               
Cow position:
               
chr4:19497223-19497523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
348-704
               

               
Cow position:
               
chr4:24458070-24458422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
354-648
               

               
Cow position:
               
chr4:1015095-1014793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
355-639
               

               
Cow position:
               
chr4:27561422-27561131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
355-677
               

               
Cow position:
               
chr4:58512536-58512867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
93, 68
               

               
Conread position:
               
359-567
               

               
Cow position:
               
chr4:44676216-44676001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
359-621
               

               
Cow position:
               
chr4:45240296-45240023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr4:123188-123459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr4:13878202-13877936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
359-632
               

               
Cow position:
               
chr4:35939986-35940269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
359-638
               

               
Cow position:
               
chr4:63119218-63119495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 66
               

               
Conread position:
               
359-639
               

               
Cow position:
               
chr4:4737036-4736774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
127, 46
               

               
Conread position:
               
359-639
               

               
Cow position:
               
chr4:35982017-35981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
24, 45
               

               
Conread position:
               
359-639
               

               
Cow position:
               
chr4:46060963-46060681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr4:22051450-22051735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
114, 66
               

               
Conread position:
               
359-646
               

               
Cow position:
               
chr4:4320981-4321278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
359-646
               

               
Cow position:
               
chr4:37619867-37620159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
61, 46
               

               
Conread position:
               
359-646
               

               
Cow position:
               
chr4:58261129-58261425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 67
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr4:24118886-24119185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
359-650
               

               
Cow position:
               
chr4:11671473-11671176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 73
               

               
Conread position:
               
359-652
               

               
Cow position:
               
chr4:23526715-23526419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
359-656
               

               
Cow position:
               
chr4:3251529-3251818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
178, 45
               

               
Conread position:
               
359-659
               

               
Cow position:
               
chr4:51015109-51014833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
359-661
               

               
Cow position:
               
chr4:1035071-1034783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
188, 7
               

               
Conread position:
               
359-661
               

               
Cow position:
               
chr4:14964799-14964486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
360-640
               

               
Cow position:
               
chr4:3687942-3687662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
85, 60
               

               
Conread position:
               
360-648
               

               
Cow position:
               
chr4:2894051-2893750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
360-648
               

               
Cow position:
               
chr4:5984026-5984319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
360-648
               

               
Cow position:
               
chr4:11201840-11201543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
360-648
               

               
Cow position:
               
chr4:17832881-17833179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
40, 264
               

               
Conread position:
               
360-649
               

               
Cow position:
               
chr4:21058356-21058660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
39, 51
               

               
Conread position:
               
361-629
               

               
Cow position:
               
chr4:24688326-24688604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
361-656
               

               
Cow position:
               
chr4:9912749-9912446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
362-614
               

               
Cow position:
               
chr4:61191471-61191227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 17
               

               
Conread position:
               
362-632
               

               
Cow position:
               
chr4:38181700-38181423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 74
               

               
Conread position:
               
362-639
               

               
Cow position:
               
chr4:26746501-26746219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 66
               

               
Conread position:
               
362-645
               

               
Cow position:
               
chr4:203125-203419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 56
               

               
Conread position:
               
362-646
               

               
Cow position:
               
chr4:53209255-53208967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
364-645
               

               
Cow position:
               
chr4:20299291-20298998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 68
               

               
Conread position:
               
365-683
               

               
Cow position:
               
chr4:22849701-22850015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
113, 44
               

               
Conread position:
               
366-614
               

               
Cow position:
               
chr4:27687941-27687684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
96, 54
               

               
Conread position:
               
366-649
               

               
Cow position:
               
chr4:479994-480282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 59
               

               
Conread position:
               
369-631
               

               
Cow position:
               
chr4:33357947-33357674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 41
               

               
Conread position:
               
369-649
               

               
Cow position:
               
chr4:66172785-66173072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 68
               

               
Conread position:
               
370-649
               

               
Cow position:
               
chr4:19463506-19463217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
29, 41
               

               
Conread position:
               
371-648
               

               
Cow position:
               
chr4:43369837-43370124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
374-617
               

               
Cow position:
               
chr4:48137918-48137667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
376-626
               

               
Cow position:
               
chr4:18576766-18577029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
106, 42
               

               
Conread position:
               
376-629
               

               
Cow position:
               
chr4:49089795-49089539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
376-640
               

               
Cow position:
               
chr4:5777036-5777296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
377-644
               

               
Cow position:
               
chr4:23536238-23535977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
378-648
               

               
Cow position:
               
chr4:1915576-1915852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
378-655
               

               
Cow position:
               
chr4:61190511-61190795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 86
               

               
Conread position:
               
390-642
               

               
Cow position:
               
chr4:50760131-50760387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
392-605
               

               
Cow position:
               
chr4:46861605-46861822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 44
               

               
Conread position:
               
394-640
               

               
Cow position:
               
chr4:4409363-4409605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 33
               

               
Conread position:
               
394-713
               

               
Cow position:
               
chr4:65168016-65168352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
396-644
               

               
Cow position:
               
chr4:61399456-61399695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
399-648
               

               
Cow position:
               
chr4:36841269-36841003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
407-640
               

               
Cow position:
               
chr4:54501471-54501715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
407-656
               

               
Cow position:
               
chr4:63349501-63349758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 131
               

               
Conread position:
               
408-628
               

               
Cow position:
               
chr4:40410151-40410374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
408-632
               

               
Cow position:
               
chr4:61271648-61271891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
408-648
               

               
Cow position:
               
chr4:561378-561127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
27, 37
               

               
Conread position:
               
408-648
               

               
Cow position:
               
chr4:7430295-7430045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
409-638
               

               
Cow position:
               
chr4:49424802-49424574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
410-639
               

               
Cow position:
               
chr4:17176138-17175902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
410-645
               

               
Cow position:
               
chr4:11099697-11099936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
63, 8
               

               
Conread position:
               
410-648
               

               
Cow position:
               
chr4:43148381-43148130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
410-649
               

               
Cow position:
               
chr4:30960476-30960243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
411-640
               

               
Cow position:
               
chr4:22744294-22744058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 65
               

               
Conread position:
               
412-648
               

               
Cow position:
               
chr4:9795408-9795645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
412-648
               

               
Cow position:
               
chr4:19265547-19265299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 26
               

               
Conread position:
               
413-619
               

               
Cow position:
               
chr4:8650204-8649996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
414-621
               

               
Cow position:
               
chr4:44024848-44025064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
414-621
               

               
Cow position:
               
chr4:63813341-63813549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
414-639
               

               
Cow position:
               
chr4:51630613-51630392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
128, 7
               

               
Conread position:
               
414-649
               

               
Cow position:
               
chr4:22215682-22215931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 200
               

               
Conread position:
               
415-650
               

               
Cow position:
               
chr4:18489415-18489666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
416-646
               

               
Cow position:
               
chr4:38309173-38309405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 69
               

               
Conread position:
               
416-649
               

               
Cow position:
               
chr4:51289675-51289437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
418-651
               

               
Cow position:
               
chr4:3475592-3475353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
424-614
               

               
Cow position:
               
chr4:43753132-43752938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
425-640
               

               
Cow position:
               
chr4:56513986-56514205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
57, 7
               

               
Conread position:
               
425-642
               

               
Cow position:
               
chr4:43542776-43543002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
425-645
               

               
Cow position:
               
chr4:11090739-11090957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 111
               

               
Conread position:
               
425-645
               

               
Cow position:
               
chr4:69305610-69305385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 133
               

               
Conread position:
               
425-648
               

               
Cow position:
               
chr4:66112114-66112351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
425-656
               

               
Cow position:
               
chr4:59105858-59106093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
115, 70
               

               
Conread position:
               
434-647
               

               
Cow position:
               
chr4:19582669-19582889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 109
               

               
Conread position:
               
434-648
               

               
Cow position:
               
chr4:19142237-19142015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
434-656
               

               
Cow position:
               
chr4:44072815-44073052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
435-618
               

               
Cow position:
               
chr4:45653526-45653726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
435-639
               

               
Cow position:
               
chr4:48235588-48235374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
438-621
               

               
Cow position:
               
chr4:49813722-49813913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
438-644
               

               
Cow position:
               
chr4:23655938-23655724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 174
               

               
Conread position:
               
438-648
               

               
Cow position:
               
chr4:21257180-21257403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
439-631
               

               
Cow position:
               
chr4:25984168-25983970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
439-648
               

               
Cow position:
               
chr4:27511209-27510997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
439-661
               

               
Cow position:
               
chr4:24415232-24414997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
445-656
               

               
Cow position:
               
chr4:19438388-19438176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
447-641
               

               
Cow position:
               
chr4:62953939-62953748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
449-656
               

               
Cow position:
               
chr4:9482284-9482500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
24, 6
               

               
Conread position:
               
451-637
               

               
Cow position:
               
chr4:10472147-10471960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
453-640
               

               
Cow position:
               
chr4:57555897-57555700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
455-609
               

               
Cow position:
               
chr4:41907868-41908026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
455-628
               

               
Cow position:
               
chr4:26549383-26549209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
455-632
               

               
Cow position:
               
chr4:26541664-26541473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
455-640
               

               
Cow position:
               
chr4:17052677-17052864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
455-640
               

               
Cow position:
               
chr4:22354870-22354673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
455-642
               

               
Cow position:
               
chr4:14159202-14159392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
455-646
               

               
Cow position:
               
chr4:46668491-46668298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
455-647
               

               
Cow position:
               
chr4:11901637-11901836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
455-647
               

               
Cow position:
               
chr4:22010141-22010331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
455-647
               

               
Cow position:
               
chr4:55270834-55271032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr4:620226-620426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
18, 187
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr4:5610147-5610344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr4:27540539-27540347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
113, 25
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr4:34171647-34171843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 12
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr4:39455972-39455780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
455-648
               

               
Cow position:
               
chr4:54468368-54468570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
455-649
               

               
Cow position:
               
chr4:42266828-42267017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
455-652
               

               
Cow position:
               
chr4:27292032-27292237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
23, 124
               

               
Conread position:
               
455-653
               

               
Cow position:
               
chr4:37470475-37470271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
455-656
               

               
Cow position:
               
chr4:59129721-59129932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 187
               

               
Conread position:
               
456-647
               

               
Cow position:
               
chr4:9815431-9815625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
458-645
               

               
Cow position:
               
chr4:69406292-69406097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
458-660
               

               
Cow position:
               
chr4:15462355-15462559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
463-640
               

               
Cow position:
               
chr4:49068355-49068173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
464-617
               

               
Cow position:
               
chr4:33122316-33122162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
464-632
               

               
Cow position:
               
chr4:1179550-1179724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 33
               

               
Conread position:
               
464-640
               

               
Cow position:
               
chr4:65825937-65826121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
464-644
               

               
Cow position:
               
chr4:41899171-41898986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
464-644
               

               
Cow position:
               
chr4:48284003-48283820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
464-650
               

               
Cow position:
               
chr4:23060084-23060280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 117
               

               
Conread position:
               
465-649
               

               
Cow position:
               
chr4:37955229-37955416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
467-643
               

               
Cow position:
               
chr4:7584025-7583843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
467-645
               

               
Cow position:
               
chr4:22567784-22567608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
467-648
               

               
Cow position:
               
chr4:68944262-68944450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
22, 108
               

               
Conread position:
               
467-650
               

               
Cow position:
               
chr4:10871489-10871666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
468-641
               

               
Cow position:
               
chr4:6822371-6822202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
468-645
               

               
Cow position:
               
chr4:20562527-20562345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
468-646
               

               
Cow position:
               
chr4:39274116-39273936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
468-658
               

               
Cow position:
               
chr4:62570724-62570531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
468-660
               

               
Cow position:
               
chr4:42638379-42638571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
153, 69
               

               
Conread position:
               
468-662
               

               
Cow position:
               
chr4:11175996-11175803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
468-673
               

               
Cow position:
               
chr4:56529982-56530188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
469-646
               

               
Cow position:
               
chr4:52584472-52584654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
469-648
               

               
Cow position:
               
chr4:19256227-19256047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 89
               

               
Conread position:
               
469-696
               

               
Cow position:
               
chr4:18521927-18522155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 24
               

               
Conread position:
               
470-647
               

               
Cow position:
               
chr4:4085231-4085409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
72, 30
               

               
Conread position:
               
471-632
               

               
Cow position:
               
chr4:30690626-30690466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 59
               

               
Conread position:
               
471-646
               

               
Cow position:
               
chr4:6166426-6166596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
471-650
               

               
Cow position:
               
chr4:61999553-61999729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
471-658
               

               
Cow position:
               
chr4:9834956-9835142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
471-661
               

               
Cow position:
               
chr4:28789215-28789407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
471-661
               

               
Cow position:
               
chr4:46151554-46151745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
472-631
               

               
Cow position:
               
chr4:20926254-20926416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
6, 33
               

               
Conread position:
               
472-648
               

               
Cow position:
               
chr4:19421236-19421057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
13, 30
               

               
Conread position:
               
473-653
               

               
Cow position:
               
chr4:5576031-5575848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 145
               

               
Conread position:
               
473-656
               

               
Cow position:
               
chr4:4300445-4300257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
474-637
               

               
Cow position:
               
chr4:455198-455031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
23, 16
               

               
Conread position:
               
475-638
               

               
Cow position:
               
chr4:6803086-6802926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
475-647
               

               
Cow position:
               
chr4:19584606-19584431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
475-647
               

               
Cow position:
               
chr4:53701429-53701266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
476-632
               

               
Cow position:
               
chr4:29527272-29527432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
476-640
               

               
Cow position:
               
chr4:2244087-2244254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
138, 111
               

               
Conread position:
               
477-632
               

               
Cow position:
               
chr4:5916086-5915926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
477-654
               

               
Cow position:
               
chr4:17585122-17585299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
478-632
               

               
Cow position:
               
chr4:66127428-66127586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
479-621
               

               
Cow position:
               
chr4:59565435-59565294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
6, 95
               

               
Conread position:
               
479-657
               

               
Cow position:
               
chr4:57931805-57931628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
479-658
               

               
Cow position:
               
chr4:60839337-60839156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
479-666
               

               
Cow position:
               
chr4:62674166-62673983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
480-632
               

               
Cow position:
               
chr4:67042860-67042705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
480-639
               

               
Cow position:
               
chr4:2422478-2422317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
480-647
               

               
Cow position:
               
chr4:62471967-62471795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
480-659
               

               
Cow position:
               
chr4:49741440-49741263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
480-660
               

               
Cow position:
               
chr4:13920204-13920386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
481-619
               

               
Cow position:
               
chr4:33062808-33062666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
481-620
               

               
Cow position:
               
chr4:46370709-46370565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
481-628
               

               
Cow position:
               
chr4:41292082-41292234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr4:2536725-2536575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
141, 88
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr4:12259886-12260040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
481-632
               

               
Cow position:
               
chr4:56410082-56409925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
481-640
               

               
Cow position:
               
chr4:54667794-54667957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 45
               

               
Conread position:
               
481-640
               

               
Cow position:
               
chr4:56233581-56233425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
481-646
               

               
Cow position:
               
chr4:10412271-10412107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
481-646
               

               
Cow position:
               
chr4:22072776-22072945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
481-648
               

               
Cow position:
               
chr4:37553145-37553318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
481-657
               

               
Cow position:
               
chr4:67392853-67392687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
481-704
               

               
Cow position:
               
chr4:42232552-42232336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 66
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:16736397-16736229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
482-648
               

               
Cow position:
               
chr4:21246670-21246838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
483-640
               

               
Cow position:
               
chr4:53752400-53752251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
483-660
               

               
Cow position:
               
chr4:29710139-29710319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 165
               

               
Conread position:
               
484-646
               

               
Cow position:
               
chr4:14812638-14812796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 103
               

               
Conread position:
               
485-624
               

               
Cow position:
               
chr4:2114243-2114383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
485-640
               

               
Cow position:
               
chr4:13818536-13818697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
486-625
               

               
Cow position:
               
chr4:41777503-41777638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
129, 61
               

               
Conread position:
               
486-628
               

               
Cow position:
               
chr4:1061049-1061186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
486-644
               

               
Cow position:
               
chr4:24432530-24432377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
486-646
               

               
Cow position:
               
chr4:10613352-10613518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
486-647
               

               
Cow position:
               
chr4:49212825-49212994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
48, 8
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr4:30574340-30574182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
486-648
               

               
Cow position:
               
chr4:61720983-61721145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 153
               

               
Conread position:
               
486-650
               

               
Cow position:
               
chr4:43495790-43495626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
486-656
               

               
Cow position:
               
chr4:19355246-19355069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
487-629
               

               
Cow position:
               
chr4:61066537-61066398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
78, 59
               

               
Conread position:
               
488-649
               

               
Cow position:
               
chr4:56104442-56104608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
488-656
               

               
Cow position:
               
chr4:58687546-58687719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
490-621
               

               
Cow position:
               
chr4:40434248-40434381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 72
               

               
Conread position:
               
490-631
               

               
Cow position:
               
chr4:52177251-52177397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 86
               

               
Conread position:
               
490-639
               

               
Cow position:
               
chr4:68941563-68941714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 41
               

               
Conread position:
               
490-646
               

               
Cow position:
               
chr4:24197915-24198065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
490-646
               

               
Cow position:
               
chr4:41896828-41896986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 122
               

               
Conread position:
               
490-647
               

               
Cow position:
               
chr4:10056093-10055938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
490-647
               

               
Cow position:
               
chr4:21064117-21064277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
490-647
               

               
Cow position:
               
chr4:56226772-56226616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
490-649
               

               
Cow position:
               
chr4:30814961-30814802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
490-656
               

               
Cow position:
               
chr4:43837603-43837435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
490-658
               

               
Cow position:
               
chr4:22259538-22259702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
132, 5
               

               
Conread position:
               
492-618
               

               
Cow position:
               
chr4:39011440-39011570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
492-621
               

               
Cow position:
               
chr4:21250370-21250496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
493-631
               

               
Cow position:
               
chr4:26307616-26307757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
493-639
               

               
Cow position:
               
chr4:42103977-42103830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
493-660
               

               
Cow position:
               
chr4:28094573-28094737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
493-687
               

               
Cow position:
               
chr4:15871839-15872037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
494-646
               

               
Cow position:
               
chr4:29237277-29237422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
74, 47
               

               
Conread position:
               
495-621
               

               
Cow position:
               
chr4:52177532-52177405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
495-621
               

               
Cow position:
               
chr4:53447789-53447912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
70, 31
               

               
Conread position:
               
495-630
               

               
Cow position:
               
chr4:5629873-5630009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
495-631
               

               
Cow position:
               
chr4:656936-657076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 50
               

               
Conread position:
               
495-638
               

               
Cow position:
               
chr4:14131392-14131252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
495-642
               

               
Cow position:
               
chr4:10993671-10993818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-642
               

               
Cow position:
               
chr4:19207269-19207123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr4:19742091-19742242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr4:26000410-26000562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
495-645
               

               
Cow position:
               
chr4:69018247-69018097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr4:7249691-7249841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
495-646
               

               
Cow position:
               
chr4:61234875-61235039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr4:7258543-7258701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
495-648
               

               
Cow position:
               
chr4:46275070-46274919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
495-650
               

               
Cow position:
               
chr4:19708820-19708667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
495-650
               

               
Cow position:
               
chr4:46258365-46258209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
495-650
               

               
Cow position:
               
chr4:55508536-55508691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
495-652
               

               
Cow position:
               
chr4:22073436-22073587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
495-654
               

               
Cow position:
               
chr4:31175178-31175018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
495-656
               

               
Cow position:
               
chr4:5924644-5924805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
124, 13
               

               
Conread position:
               
495-656
               

               
Cow position:
               
chr4:5978890-5979051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
495-661
               

               
Cow position:
               
chr4:40576041-40576203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
495-671
               

               
Cow position:
               
chr4:33623598-33623420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
495-680
               

               
Cow position:
               
chr4:30048710-30048527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
495-683
               

               
Cow position:
               
chr4:46385694-46385888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
496-632
               

               
Cow position:
               
chr4:47289953-47289812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr4:12034139-12033990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 54
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr4:14743138-14742985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr4:49409348-49409191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
496-648
               

               
Cow position:
               
chr4:51903480-51903328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
496-650
               

               
Cow position:
               
chr4:11187332-11187181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
496-686
               

               
Cow position:
               
chr4:59976428-59976613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
496-704
               

               
Cow position:
               
chr4:5850448-5850662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
496-728
               

               
Cow position:
               
chr4:59358555-59358790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
39, 168
               

               
Conread position:
               
497-640
               

               
Cow position:
               
chr4:41833387-41833531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
497-646
               

               
Cow position:
               
chr4:48204759-48204908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
497-649
               

               
Cow position:
               
chr4:16637723-16637873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
497-656
               

               
Cow position:
               
chr4:19542672-19542514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
497-661
               

               
Cow position:
               
chr4:44684279-44684447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
497-715
               

               
Cow position:
               
chr4:48591526-48591748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
45, 162
               

               
Conread position:
               
498-646
               

               
Cow position:
               
chr4:61840655-61840807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
498-647
               

               
Cow position:
               
chr4:7621-7771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 75
               

               
Conread position:
               
498-650
               

               
Cow position:
               
chr4:58613083-58613239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
499-640
               

               
Cow position:
               
chr4:9442-9582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 46
               

               
Conread position:
               
499-648
               

               
Cow position:
               
chr4:38945921-38945771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
499-648
               

               
Cow position:
               
chr4:61215126-61215272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
124, 43
               

               
Conread position:
               
499-649
               

               
Cow position:
               
chr4:56852773-56852622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
499-652
               

               
Cow position:
               
chr4:3388420-3388274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
499-667
               

               
Cow position:
               
chr4:61969758-61969930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
501-638
               

               
Cow position:
               
chr4:52632101-52632234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 60
               

               
Conread position:
               
501-648
               

               
Cow position:
               
chr4:26009324-26009172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
501-692
               

               
Cow position:
               
chr4:46708654-46708849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 73
               

               
Conread position:
               
503-632
               

               
Cow position:
               
chr4:32838644-32838778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
503-642
               

               
Cow position:
               
chr4:62407029-62406887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
503-666
               

               
Cow position:
               
chr4:11599737-11599570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
504-661
               

               
Cow position:
               
chr4:10041908-10041751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
506-633
               

               
Cow position:
               
chr4:59118273-59118405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 75
               

               
Conread position:
               
510-632
               

               
Cow position:
               
chr4:18756050-18755927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
510-640
               

               
Cow position:
               
chr4:47280260-47280394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
510-656
               

               
Cow position:
               
chr4:48172974-48172831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
511-648
               

               
Cow position:
               
chr4:20116990-20117122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
513-649
               

               
Cow position:
               
chr4:51851063-51850920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
513-660
               

               
Cow position:
               
chr4:16831727-16831874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
513-666
               

               
Cow position:
               
chr4:37879307-37879155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
517-656
               

               
Cow position:
               
chr4:9714583-9714445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
530-661
               

               
Cow position:
               
chr4:22546955-22547086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
536-632
               

               
Cow position:
               
chr4:60030782-60030683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
540-656
               

               
Cow position:
               
chr4:34043918-34044034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
560-661
               

               
Cow position:
               
chr4:30977810-30977910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               
Show alignments to all cow chromosomes.