Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 437-679 |
| Cow position: | chr13:3167370-3167598 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 437-697 |
| Cow position: | chr13:1725878-1725625 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 441-694 |
| Cow position: | chr13:61121722-61121478 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 446-687 |
| Cow position: | chr13:5776960-5776729 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 8 |
| Conread position: | 448-665 |
| Cow position: | chr13:41312291-41312500 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 448-693 |
| Cow position: | chr13:52833236-52833488 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 34 |
| Conread position: | 448-698 |
| Cow position: | chr13:179756-179514 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 14 |
| Conread position: | 448-713 |
| Cow position: | chr13:3564004-3564264 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 45, 27 |
| Conread position: | 449-688 |
| Cow position: | chr13:4498578-4498353 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 33 |
| Conread position: | 452-691 |
| Cow position: | chr13:20490029-20490266 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 28 |
| Conread position: | 453-697 |
| Cow position: | chr13:22976700-22976937 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 456-654 |
| Cow position: | chr13:56929782-56929591 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 456-709 |
| Cow position: | chr13:30772634-30772880 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 457-689 |
| Cow position: | chr13:58857070-58856835 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 51 |
| Conread position: | 457-691 |
| Cow position: | chr13:17127178-17127406 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 27, 46 |
| Conread position: | 460-664 |
| Cow position: | chr13:1424255-1424051 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 462-694 |
| Cow position: | chr13:16342684-16342900 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 463-691 |
| Cow position: | chr13:11570416-11570642 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 464-691 |
| Cow position: | chr13:6178633-6178411 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 18 |
| Conread position: | 467-687 |
| Cow position: | chr13:46131455-46131663 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 470-685 |
| Cow position: | chr13:18052553-18052341 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 470-691 |
| Cow position: | chr13:18046944-18047153 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 484-691 |
| Cow position: | chr13:1639409-1639211 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 524-662 |
| Cow position: | chr13:44089741-44089879 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 111 |
| Conread position: | 524-691 |
| Cow position: | chr13:9083642-9083471 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 526-682 |
| Cow position: | chr13:29650544-29650698 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 28, 84 |
| Conread position: | 528-690 |
| Cow position: | chr13:24740134-24739979 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 529-682 |
| Cow position: | chr13:33767550-33767700 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.