Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 437-644 |
| Cow position: | chr16:46450995-46450795 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 84 |
| Conread position: | 445-665 |
| Cow position: | chr16:10686465-10686661 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 448-657 |
| Cow position: | chr16:16163139-16163340 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 34 |
| Conread position: | 448-657 |
| Cow position: | chr16:52731709-52731511 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 448-663 |
| Cow position: | chr16:27075753-27075543 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 448-691 |
| Cow position: | chr16:43843137-43843379 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 34, 72 |
| Conread position: | 448-698 |
| Cow position: | chr16:5911530-5911283 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 452-697 |
| Cow position: | chr16:5605499-5605738 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 455-715 |
| Cow position: | chr16:38179011-38178750 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 456-673 |
| Cow position: | chr16:42708157-42708376 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-688 |
| Cow position: | chr16:28850060-28850276 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 52, 26 |
| Conread position: | 456-691 |
| Cow position: | chr16:25894745-25894510 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 28, 69 |
| Conread position: | 456-691 |
| Cow position: | chr16:28767747-28767523 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 70, 26 |
| Conread position: | 456-698 |
| Cow position: | chr16:17004005-17003772 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-706 |
| Cow position: | chr16:46030170-46029928 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 457-691 |
| Cow position: | chr16:19342728-19342957 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 462-681 |
| Cow position: | chr16:14364643-14364852 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 462-691 |
| Cow position: | chr16:9987717-9987940 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 462-691 |
| Cow position: | chr16:25938100-25937877 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 464-688 |
| Cow position: | chr16:15093010-15093223 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 464-691 |
| Cow position: | chr16:14325566-14325338 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 465-686 |
| Cow position: | chr16:13831356-13831576 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 490-688 |
| Cow position: | chr16:52529580-52529391 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 499-685 |
| Cow position: | chr16:45087850-45087669 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 516-688 |
| Cow position: | chr16:20539700-20539529 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 72, 8 |
Show alignments to all cow chromosomes.