Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8026K12.5
        

               Conread position:
               448-680
               

               Cow position:
               chr18:42248303-42248530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 73
               

               Conread position:
               448-683
               

               Cow position:
               chr18:8626150-8626382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               452-691
               

               Cow position:
               chr18:21012959-21013189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               456-691
               

               Cow position:
               chr18:56010468-56010245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               456-694
               

               Cow position:
               chr18:28666154-28665921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               460-691
               

               Cow position:
               chr18:290138-290366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 58
               

               Conread position:
               462-656
               

               Cow position:
               chr18:20222818-20223011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               462-688
               

               Cow position:
               chr18:39740499-39740277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               462-693
               

               Cow position:
               chr18:1069597-1069823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               22, 39
               

               Conread position:
               482-658
               

               Cow position:
               chr18:6298384-6298211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               84, 17
               

               Conread position:
               488-705
               

               Cow position:
               chr18:30041654-30041438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               517-689
               

               Cow position:
               chr18:17009568-17009400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 77
               
Show alignments to all cow chromosomes.