Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 446-676 |
| Cow position: | chr2:3831455-3831671 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 446-691 |
| Cow position: | chr2:17231263-17231500 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 446-691 |
| Cow position: | chr2:52625743-52625511 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 446-691 |
| Cow position: | chr2:79075425-79075663 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 49, 7 |
| Conread position: | 448-665 |
| Cow position: | chr2:24879087-24879308 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 183, 69 |
| Conread position: | 448-674 |
| Cow position: | chr2:62064570-62064347 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 448-683 |
| Cow position: | chr2:31827455-31827681 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 448-691 |
| Cow position: | chr2:4830240-4830476 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 34 |
| Conread position: | 448-698 |
| Cow position: | chr2:45471084-45470836 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 448-698 |
| Cow position: | chr2:51809036-51809283 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 449-677 |
| Cow position: | chr2:61909356-61909579 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 30 |
| Conread position: | 450-691 |
| Cow position: | chr2:33341386-33341621 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 451-688 |
| Cow position: | chr2:1633267-1633499 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 70 |
| Conread position: | 451-697 |
| Cow position: | chr2:37448694-37448947 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 452-691 |
| Cow position: | chr2:10282940-10282702 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 453-691 |
| Cow position: | chr2:10362649-10362876 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 456-663 |
| Cow position: | chr2:10989367-10989168 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 456-664 |
| Cow position: | chr2:6053322-6053532 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-664 |
| Cow position: | chr2:15242718-15242920 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 64 |
| Conread position: | 456-688 |
| Cow position: | chr2:11534265-11534045 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 40 |
| Conread position: | 456-690 |
| Cow position: | chr2:5716639-5716415 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 28 |
| Conread position: | 456-691 |
| Cow position: | chr2:51191700-51191934 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 63 |
| Conread position: | 456-691 |
| Cow position: | chr2:54468784-54469010 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 456-692 |
| Cow position: | chr2:69701946-69702177 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 456-697 |
| Cow position: | chr2:79939087-79939323 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 456-706 |
| Cow position: | chr2:37996865-37996641 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 457-698 |
| Cow position: | chr2:52347190-52347437 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 458-691 |
| Cow position: | chr2:62563410-62563639 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 63 |
| Conread position: | 462-672 |
| Cow position: | chr2:59611432-59611636 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 462-699 |
| Cow position: | chr2:883969-884207 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 471-691 |
| Cow position: | chr2:3627922-3628134 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 19, 11 |
| Conread position: | 477-691 |
| Cow position: | chr2:35464620-35464399 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 497-697 |
| Cow position: | chr2:39819900-39819709 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 509-690 |
| Cow position: | chr2:3149020-3148841 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 83 |
| Conread position: | 511-688 |
| Cow position: | chr2:62503156-62502986 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 123, 6 |
| Conread position: | 526-698 |
| Cow position: | chr2:4671008-4670832 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.