Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 414-694 |
| Cow position: | chr3:3095539-3095800 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 25, 21 |
| Conread position: | 428-682 |
| Cow position: | chr3:31812937-31812683 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 432-694 |
| Cow position: | chr3:80065775-80066030 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 439-691 |
| Cow position: | chr3:41316511-41316255 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 85 |
| Conread position: | 445-682 |
| Cow position: | chr3:38690756-38690989 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 445-687 |
| Cow position: | chr3:69894830-69895065 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 445-689 |
| Cow position: | chr3:78710278-78710036 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 448-682 |
| Cow position: | chr3:69467652-69467428 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 59 |
| Conread position: | 448-690 |
| Cow position: | chr3:1750695-1750455 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 448-691 |
| Cow position: | chr3:74110587-74110346 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 448-697 |
| Cow position: | chr3:41817883-41818109 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 139, 8 |
| Conread position: | 448-697 |
| Cow position: | chr3:62561228-62560975 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 36, 79 |
| Conread position: | 452-665 |
| Cow position: | chr3:70697684-70697891 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 71, 30 |
| Conread position: | 452-688 |
| Cow position: | chr3:38256023-38255787 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 69 |
| Conread position: | 453-691 |
| Cow position: | chr3:19559693-19559926 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 38, 29 |
| Conread position: | 456-671 |
| Cow position: | chr3:40000782-40000986 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 30, 62 |
| Conread position: | 456-685 |
| Cow position: | chr3:22850453-22850677 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 24 |
| Conread position: | 456-691 |
| Cow position: | chr3:22866451-22866685 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 24 |
| Conread position: | 456-691 |
| Cow position: | chr3:41946649-41946877 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 456-698 |
| Cow position: | chr3:55897163-55896915 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 61, 33 |
| Conread position: | 457-697 |
| Cow position: | chr3:45435399-45435165 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 49, 25 |
| Conread position: | 459-698 |
| Cow position: | chr3:33468241-33468476 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 462-664 |
| Cow position: | chr3:24783945-24783748 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 33, 17 |
| Conread position: | 462-690 |
| Cow position: | chr3:24261483-24261696 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 470-691 |
| Cow position: | chr3:66944897-66945117 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 485-691 |
| Cow position: | chr3:34953860-34953667 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 485-698 |
| Cow position: | chr3:15329216-15329421 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 506-691 |
| Cow position: | chr3:56565634-56565457 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 11 |
| Conread position: | 517-691 |
| Cow position: | chr3:49841023-49841196 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 141, 71 |
| Conread position: | 520-665 |
| Cow position: | chr3:45343502-45343360 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 526-689 |
| Cow position: | chr3:41402521-41402360 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 526-694 |
| Cow position: | chr3:7942029-7942190 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 527-691 |
| Cow position: | chr3:26531658-26531816 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.