Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 427-697 |
| Cow position: | chr4:20465171-20464903 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 104 |
| Conread position: | 430-691 |
| Cow position: | chr4:13919829-13920084 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 35 |
| Conread position: | 436-697 |
| Cow position: | chr4:54314042-54314288 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 50, 70 |
| Conread position: | 443-691 |
| Cow position: | chr4:21254233-21254476 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 189, 37 |
| Conread position: | 445-691 |
| Cow position: | chr4:38623450-38623693 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 445-694 |
| Cow position: | chr4:5557572-5557321 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 129 |
| Conread position: | 446-691 |
| Cow position: | chr4:5496341-5496104 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 448-633 |
| Cow position: | chr4:8615209-8615390 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 448-665 |
| Cow position: | chr4:42495422-42495632 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 448-682 |
| Cow position: | chr4:30815327-30815100 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 448-691 |
| Cow position: | chr4:5499486-5499238 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 34 |
| Conread position: | 448-691 |
| Cow position: | chr4:23926518-23926747 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 448-691 |
| Cow position: | chr4:44737914-44737672 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 75, 37 |
| Conread position: | 448-691 |
| Cow position: | chr4:48403988-48404232 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 448-696 |
| Cow position: | chr4:65478759-65478994 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 34 |
| Conread position: | 449-691 |
| Cow position: | chr4:49232547-49232780 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 159, 35 |
| Conread position: | 450-697 |
| Cow position: | chr4:11634683-11634934 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 455-697 |
| Cow position: | chr4:3245223-3244993 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 456-672 |
| Cow position: | chr4:21414918-21415128 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-688 |
| Cow position: | chr4:11653224-11652992 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 78 |
| Conread position: | 456-691 |
| Cow position: | chr4:10871166-10871393 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-693 |
| Cow position: | chr4:44644703-44644933 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 24 |
| Conread position: | 456-694 |
| Cow position: | chr4:44734913-44735134 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 75 |
| Conread position: | 456-698 |
| Cow position: | chr4:22568113-22567879 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 457-693 |
| Cow position: | chr4:46493127-46492882 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 459-691 |
| Cow position: | chr4:15120498-15120270 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 59 |
| Conread position: | 462-687 |
| Cow position: | chr4:25576170-25575945 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 20 |
| Conread position: | 462-697 |
| Cow position: | chr4:20291249-20291020 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 470-691 |
| Cow position: | chr4:35181645-35181433 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 481-691 |
| Cow position: | chr4:19151445-19151646 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 484-658 |
| Cow position: | chr4:24370233-24370400 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 485-691 |
| Cow position: | chr4:11571144-11571335 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 11, 28 |
| Conread position: | 485-692 |
| Cow position: | chr4:30223079-30223281 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 486-691 |
| Cow position: | chr4:6381073-6381271 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 494-696 |
| Cow position: | chr4:61982876-61983073 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 516-691 |
| Cow position: | chr4:4135609-4135437 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 73, 16 |
| Conread position: | 520-693 |
| Cow position: | chr4:52706976-52706810 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 520-697 |
| Cow position: | chr4:58801801-58801972 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 526-664 |
| Cow position: | chr4:26747592-26747726 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 527-682 |
| Cow position: | chr4:52580069-52579919 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 528-697 |
| Cow position: | chr4:44904871-44905038 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 548-691 |
| Cow position: | chr4:35072309-35072168 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.