Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 362-690 |
| Cow position: | chr6:1888660-1888993 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 445-646 |
| Cow position: | chr6:54634048-54634241 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 446-685 |
| Cow position: | chr6:22590358-22590125 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 448-665 |
| Cow position: | chr6:18868275-18868488 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 448-691 |
| Cow position: | chr6:2404480-2404728 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 448-691 |
| Cow position: | chr6:14931492-14931722 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 448-691 |
| Cow position: | chr6:20407190-20406947 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 448-697 |
| Cow position: | chr6:27991959-27992196 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 115, 37 |
| Conread position: | 448-705 |
| Cow position: | chr6:54470483-54470223 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 115, 34 |
| Conread position: | 449-671 |
| Cow position: | chr6:35406719-35406936 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 72 |
| Conread position: | 449-688 |
| Cow position: | chr6:12976895-12976656 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 452-678 |
| Cow position: | chr6:62789633-62789409 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 36, 69 |
| Conread position: | 452-682 |
| Cow position: | chr6:5516720-5516946 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 453-648 |
| Cow position: | chr6:37854661-37854474 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 454-686 |
| Cow position: | chr6:57776738-57776963 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 55 |
| Conread position: | 456-663 |
| Cow position: | chr6:36917896-36918098 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 456-691 |
| Cow position: | chr6:4728628-4728856 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 456-694 |
| Cow position: | chr6:40156873-40157097 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-697 |
| Cow position: | chr6:46627611-46627376 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 458-657 |
| Cow position: | chr6:31206979-31207171 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 458-691 |
| Cow position: | chr6:10569043-10569274 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 26, 63 |
| Conread position: | 462-685 |
| Cow position: | chr6:37734576-37734364 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 462-694 |
| Cow position: | chr6:30892351-30892578 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 462-703 |
| Cow position: | chr6:6164942-6164703 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 464-691 |
| Cow position: | chr6:2665164-2665382 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 480-671 |
| Cow position: | chr6:2819543-2819731 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 74, 37 |
| Conread position: | 485-691 |
| Cow position: | chr6:2088845-2088640 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 46 |
| Conread position: | 487-689 |
| Cow position: | chr6:58881600-58881402 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 123 |
| Conread position: | 519-691 |
| Cow position: | chr6:12740825-12740657 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 522-697 |
| Cow position: | chr6:1562357-1562186 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 524-691 |
| Cow position: | chr6:50682819-50682985 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 526-691 |
| Cow position: | chr6:15961584-15961748 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.