Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 437-658 |
| Cow position: | chr7:2577217-2577003 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 437-659 |
| Cow position: | chr7:37406327-37406116 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 62 |
| Conread position: | 437-689 |
| Cow position: | chr7:68870981-68870733 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 45 |
| Conread position: | 438-691 |
| Cow position: | chr7:26697936-26698185 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 438-693 |
| Cow position: | chr7:48047513-48047766 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 79, 46 |
| Conread position: | 446-705 |
| Cow position: | chr7:55498095-55498359 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 77 |
| Conread position: | 448-678 |
| Cow position: | chr7:61683434-61683210 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 36 |
| Conread position: | 448-691 |
| Cow position: | chr7:40942532-40942296 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 448-691 |
| Cow position: | chr7:49893067-49893299 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 448-696 |
| Cow position: | chr7:18428287-18428532 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 19, 74 |
| Conread position: | 448-697 |
| Cow position: | chr7:48179945-48179712 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 449-664 |
| Cow position: | chr7:66150426-66150217 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 449-691 |
| Cow position: | chr7:57272810-57273040 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 188, 67 |
| Conread position: | 455-689 |
| Cow position: | chr7:67113832-67114059 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 456-688 |
| Cow position: | chr7:23462214-23462435 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 27, 44 |
| Conread position: | 456-688 |
| Cow position: | chr7:42555631-42555402 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 456-691 |
| Cow position: | chr7:36098353-36098116 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 56, 28 |
| Conread position: | 456-697 |
| Cow position: | chr7:15859354-15859607 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 456-697 |
| Cow position: | chr7:52532498-52532739 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 456-698 |
| Cow position: | chr7:22647661-22647900 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 456-698 |
| Cow position: | chr7:23921784-23921553 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 460-648 |
| Cow position: | chr7:238899-239092 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 22 |
| Conread position: | 460-690 |
| Cow position: | chr7:22631977-22632215 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 140 |
| Conread position: | 462-697 |
| Cow position: | chr7:22341530-22341745 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 470-695 |
| Cow position: | chr7:36478181-36477966 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 10 |
| Conread position: | 473-697 |
| Cow position: | chr7:42494300-42494513 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 485-681 |
| Cow position: | chr7:67491942-67491752 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 92, 31 |
| Conread position: | 485-687 |
| Cow position: | chr7:31890579-31890386 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 485-689 |
| Cow position: | chr7:1667051-1666856 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 486-664 |
| Cow position: | chr7:37395898-37395719 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 486-689 |
| Cow position: | chr7:22736191-22736387 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 488-689 |
| Cow position: | chr7:53406273-53406078 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 29 |
| Conread position: | 520-691 |
| Cow position: | chr7:3626892-3626726 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 31, 88 |
| Conread position: | 526-690 |
| Cow position: | chr7:58645124-58644961 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
Show alignments to all cow chromosomes.