Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 413-687 |
| Cow position: | chr8:18908412-18908147 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 73 |
| Conread position: | 442-694 |
| Cow position: | chr8:49392746-49392988 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 448-689 |
| Cow position: | chr8:15647895-15647649 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 43, 72 |
| Conread position: | 448-691 |
| Cow position: | chr8:5503931-5503699 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 33 |
| Conread position: | 448-691 |
| Cow position: | chr8:16648121-16648353 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 66 |
| Conread position: | 448-691 |
| Cow position: | chr8:59061939-59061693 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 448-697 |
| Cow position: | chr8:23329639-23329403 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 34 |
| Conread position: | 448-716 |
| Cow position: | chr8:43974444-43974696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 449-691 |
| Cow position: | chr8:42173667-42173901 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 178, 33 |
| Conread position: | 449-698 |
| Cow position: | chr8:48084974-48084741 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 451-691 |
| Cow position: | chr8:16059869-16060098 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 452-691 |
| Cow position: | chr8:36608467-36608702 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 69 |
| Conread position: | 452-691 |
| Cow position: | chr8:37381721-37381485 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 454-682 |
| Cow position: | chr8:6586218-6585993 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 10, 131 |
| Conread position: | 456-630 |
| Cow position: | chr8:29559811-29559640 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 456-678 |
| Cow position: | chr8:26158702-26158488 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 456-691 |
| Cow position: | chr8:4999592-4999372 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 456-691 |
| Cow position: | chr8:19865823-19866045 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 456-691 |
| Cow position: | chr8:21946005-21945775 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 29 |
| Conread position: | 456-691 |
| Cow position: | chr8:31288687-31288913 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 456-691 |
| Cow position: | chr8:59728162-59727933 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 39, 26 |
| Conread position: | 457-665 |
| Cow position: | chr8:33276372-33276160 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 457-676 |
| Cow position: | chr8:47047600-47047381 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 106, 34 |
| Conread position: | 460-685 |
| Cow position: | chr8:39097545-39097764 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 62 |
| Conread position: | 460-697 |
| Cow position: | chr8:8277929-8278155 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 462-691 |
| Cow position: | chr8:31495385-31495162 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 20 |
| Conread position: | 462-691 |
| Cow position: | chr8:43398819-43399040 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 18 |
| Conread position: | 462-691 |
| Cow position: | chr8:51919645-51919867 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 462-698 |
| Cow position: | chr8:17128612-17128837 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 479-691 |
| Cow position: | chr8:25050279-25050073 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 481-691 |
| Cow position: | chr8:41147092-41146887 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 39, 96 |
| Conread position: | 487-691 |
| Cow position: | chr8:19497903-19498108 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 490-688 |
| Cow position: | chr8:21994171-21993971 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 502-664 |
| Cow position: | chr8:31707794-31707955 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 511-707 |
| Cow position: | chr8:26867835-26867647 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 524-701 |
| Cow position: | chr8:1386482-1386313 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.