Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8026K12.5 |
| Conread position: | 446-679 |
| Cow position: | chr9:62302148-62301921 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 36 |
| Conread position: | 447-691 |
| Cow position: | chr9:4677745-4677494 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 448-622 |
| Cow position: | chr9:15936617-15936784 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 448-642 |
| Cow position: | chr9:964199-963999 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 32 |
| Conread position: | 448-665 |
| Cow position: | chr9:32728790-32728579 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 448-691 |
| Cow position: | chr9:4721471-4721235 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 448-691 |
| Cow position: | chr9:41903895-41904120 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 450-688 |
| Cow position: | chr9:10311209-10310972 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 451-663 |
| Cow position: | chr9:24753166-24753362 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 132, 29 |
| Conread position: | 452-664 |
| Cow position: | chr9:38221414-38221634 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 49 |
| Conread position: | 452-687 |
| Cow position: | chr9:54717516-54717289 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 30 |
| Conread position: | 452-705 |
| Cow position: | chr9:25465303-25465056 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 453-678 |
| Cow position: | chr9:35224401-35224623 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 42, 29 |
| Conread position: | 454-691 |
| Cow position: | chr9:24679646-24679406 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 50 |
| Conread position: | 456-664 |
| Cow position: | chr9:18577054-18577258 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 26, 60 |
| Conread position: | 456-676 |
| Cow position: | chr9:47022684-47022472 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 456-687 |
| Cow position: | chr9:3203914-3204143 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 65 |
| Conread position: | 456-691 |
| Cow position: | chr9:43536756-43537005 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 456-691 |
| Cow position: | chr9:47447512-47447740 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 456-694 |
| Cow position: | chr9:38350046-38350278 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 36, 26 |
| Conread position: | 460-691 |
| Cow position: | chr9:53532328-53532101 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 54 |
| Conread position: | 460-697 |
| Cow position: | chr9:9784630-9784401 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 35, 17 |
| Conread position: | 462-697 |
| Cow position: | chr9:16253241-16253021 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 56 |
| Conread position: | 462-697 |
| Cow position: | chr9:55262787-55262557 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 462-698 |
| Cow position: | chr9:39646773-39647008 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 477-682 |
| Cow position: | chr9:40859556-40859755 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 482-664 |
| Cow position: | chr9:36089848-36089671 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 483-698 |
| Cow position: | chr9:59588310-59588515 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 486-691 |
| Cow position: | chr9:15962463-15962260 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 35, 95 |
| Conread position: | 491-691 |
| Cow position: | chr9:26353418-26353220 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 491-705 |
| Cow position: | chr9:28013064-28013279 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 74, 26 |
| Conread position: | 526-716 |
| Cow position: | chr9:24952587-24952392 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 97 |
| Conread position: | 527-691 |
| Cow position: | chr9:32415390-32415233 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 530-679 |
| Cow position: | chr9:23740624-23740767 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.