Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8027G10.5 |
| Conread position: | 1-451 |
| Cow position: | chr10:8996450-8995998 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 4-273 |
| Cow position: | chr10:9031394-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 4-292 |
| Cow position: | chr10:8996195-8995915 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 95, 197 |
| Conread position: | 4-482 |
| Cow position: | chr10:9010593-9010116 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 292 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 95, 30 |
| Conread position: | 4-545 |
| Cow position: | chr10:8996867-8996325 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 198 |
| Conread position: | 15-485 |
| Cow position: | chr10:9010332-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 86, 234 |
| Conread position: | 15-532 |
| Cow position: | chr10:8996772-8996254 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-548 |
| Cow position: | chr10:8996604-8996070 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 106 |
| Conread position: | 15-568 |
| Cow position: | chr10:8996520-8995966 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 16-526 |
| Cow position: | chr10:21939171-21938662 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 85, 219 |
| Conread position: | 22-480 |
| Cow position: | chr10:21939081-21938626 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 79, 227 |
| Conread position: | 26-441 |
| Cow position: | chr10:9031248-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 240 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 73, 124 |
| Conread position: | 49-494 |
| Cow position: | chr10:21939222-21938776 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 110 |
| Conread position: | 124-313 |
| Cow position: | chr10:9031664-9031854 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 193-544 |
| Cow position: | chr10:9031248-9031599 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-840 |
| Cow position: | chr10:9031231-9031832 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 346 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 231, 247 |
| Conread position: | 524-822 |
| Cow position: | chr10:9031598-9031896 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 293 |
| Conread position: | 577-844 |
| Cow position: | chr10:8996170-8995912 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 577-844 |
| Cow position: | chr10:8996506-8996239 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr10:8996590-8996323 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr10:8996674-8996407 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 577-844 |
| Cow position: | chr10:8996758-8996491 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr10:8996842-8996575 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 40 |
| Conread position: | 577-845 |
| Cow position: | chr10:8996422-8996154 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 122 |
| Conread position: | 577-849 |
| Cow position: | chr10:8996254-8995983 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 265, 0 |
| Conread position: | 579-841 |
| Cow position: | chr10:9010148-9009886 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 579-841 |
| Cow position: | chr10:9010232-9009970 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr10:9010400-9010135 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr10:9010484-9010219 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 54, 58 |
| Conread position: | 579-848 |
| Cow position: | chr10:8996336-8996067 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-979 |
| Cow position: | chr10:9031337-9031742 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 111 |
| Conread position: | 581-806 |
| Cow position: | chr10:9010062-9009837 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 120, 131 |
| Conread position: | 581-841 |
| Cow position: | chr10:21939070-21938810 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 224, 219 |
| Conread position: | 586-844 |
| Cow position: | chr10:9031260-9031518 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 51 |
| Conread position: | 628-835 |
| Cow position: | chr10:21939107-21938900 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 636-827 |
| Cow position: | chr10:9010259-9010068 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 65, 76 |
| Conread position: | 636-834 |
| Cow position: | chr10:9010511-9010313 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 66, 76 |
| Conread position: | 636-835 |
| Cow position: | chr10:8996867-8996668 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 642-841 |
| Cow position: | chr10:9031232-9031431 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 50, 45 |
Show alignments to all cow chromosomes.