Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8027G10.5 |
| Conread position: | 1-485 |
| Cow position: | chr13:39984379-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 300 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 98, 402 |
| Conread position: | 1-532 |
| Cow position: | chr13:39983791-39984323 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 33, 48 |
| Conread position: | 4-435 |
| Cow position: | chr13:39984466-39984898 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 280 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 4-545 |
| Cow position: | chr13:39984046-39984588 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 486 |
| Conread position: | 4-545 |
| Cow position: | chr13:39984130-39984672 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 146 |
| Conread position: | 4-545 |
| Cow position: | chr13:39984298-39984840 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 54 |
| Conread position: | 14-269 |
| Cow position: | chr13:39984644-39984900 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 85, 138 |
| Conread position: | 15-545 |
| Cow position: | chr13:39983889-39984420 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 84, 194 |
| Conread position: | 16-486 |
| Cow position: | chr13:39930638-39931109 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 84, 162 |
| Conread position: | 28-487 |
| Cow position: | chr13:56292269-56291819 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 280 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 49-551 |
| Cow position: | chr13:39930587-39931090 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 311 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 577-813 |
| Cow position: | chr13:56292027-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 577-821 |
| Cow position: | chr13:39984659-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 136, 130 |
| Conread position: | 577-841 |
| Cow position: | chr13:39983987-39984251 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-841 |
| Cow position: | chr13:39984071-39984335 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 577-841 |
| Cow position: | chr13:39984239-39984503 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 31, 54 |
| Conread position: | 577-841 |
| Cow position: | chr13:39984323-39984587 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 577-841 |
| Cow position: | chr13:39984407-39984671 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-841 |
| Cow position: | chr13:56292192-56291931 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 577-841 |
| Cow position: | chr13:56317512-56317774 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 577-844 |
| Cow position: | chr13:56292111-56291843 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 107, 115 |
| Conread position: | 578-844 |
| Cow position: | chr13:56333720-56333986 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 114, 107 |
| Conread position: | 579-834 |
| Cow position: | chr13:56334066-56334321 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 27, 58 |
| Conread position: | 579-841 |
| Cow position: | chr13:39984577-39984839 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 45, 58 |
| Conread position: | 579-844 |
| Cow position: | chr13:39984493-39984758 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 579-844 |
| Cow position: | chr13:56292266-56292012 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 55 |
| Conread position: | 582-841 |
| Cow position: | chr13:39984160-39984419 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 586-844 |
| Cow position: | chr13:56292848-56292595 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 629-841 |
| Cow position: | chr13:39983953-39984167 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 645-841 |
| Cow position: | chr13:39983887-39984083 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.