Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8027G10.5 |
| Conread position: | 1-545 |
| Cow position: | chr16:14627355-14626810 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 336 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 1-545 |
| Cow position: | chr16:14627775-14627230 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 250 |
| Conread position: | 4-454 |
| Cow position: | chr16:14627184-14626733 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 4-534 |
| Cow position: | chr16:14627856-14627325 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 397 |
| Conread position: | 7-295 |
| Cow position: | chr16:14627011-14626725 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 7-547 |
| Cow position: | chr16:14627515-14626976 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 15-532 |
| Cow position: | chr16:14627257-14626739 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 281 |
| Conread position: | 16-532 |
| Cow position: | chr16:14627676-14627159 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 49 |
| Conread position: | 83-354 |
| Cow position: | chr16:14627945-14627673 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 577-758 |
| Cow position: | chr16:42493724-42493539 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 577-839 |
| Cow position: | chr16:14626991-14626729 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-841 |
| Cow position: | chr16:14627663-14627399 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 577-844 |
| Cow position: | chr16:14627159-14626892 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr16:14627328-14627060 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 577-844 |
| Cow position: | chr16:14627411-14627144 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr16:14627747-14627480 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 577-847 |
| Cow position: | chr16:14627915-14627644 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 578-844 |
| Cow position: | chr16:14627074-14626808 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr16:14627577-14627312 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 49, 60 |
| Conread position: | 580-844 |
| Cow position: | chr16:14627492-14627228 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 582-841 |
| Cow position: | chr16:14627238-14626979 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 586-840 |
| Cow position: | chr16:14627822-14627568 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 202, 197 |
| Conread position: | 586-847 |
| Cow position: | chr16:14627990-14627728 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 39 |
Show alignments to all cow chromosomes.