Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8027G10.5
        

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 14
               

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               343
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               3-480
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               97, 147
               

               Conread position:
               3-481
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               68, 55
               

               Conread position:
               3-487
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               96, 398
               

               Conread position:
               3-532
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 62
               

               Conread position:
               4-292
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               4-388
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               65, 52
               

               Conread position:
               4-532
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               13, 8
               

               Conread position:
               4-532
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               325
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               96, 325
               

               Conread position:
               4-532
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               96, 495
               

               Conread position:
               4-544
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 117
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               7-454
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               284
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               7-545
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               331
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               92, 6
               

               Conread position:
               7-551
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               7-577
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               351
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               14-532
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 134
               

               Conread position:
               14-534
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 178
               

               Conread position:
               15-485
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               296
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               15-532
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 56
               

               Conread position:
               15-532
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               313
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               56, 50
               

               Conread position:
               15-545
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               329
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               54, 50
               

               Conread position:
               16-360
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               83, 143
               

               Conread position:
               16-481
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               84, 135
               

               Conread position:
               16-532
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               320
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               16-544
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               333
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               84, 193
               

               Conread position:
               16-544
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               334
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               73-544
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               297
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               78-544
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               7, 166
               

               Conread position:
               189-534
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               150, 139
               

               Conread position:
               192-540
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               222-550
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               577-779
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               59, 39
               

               Conread position:
               577-835
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               60, 56
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               180, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               210, 206
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 141
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               124, 141
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               39, 50
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               113, 109
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               210, 206
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               217, 205
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               55, 60
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               577-847
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               577-848
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               135, 131
               

               Conread position:
               577-848
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               42, 59
               

               Conread position:
               578-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-826
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               134, 128
               

               Conread position:
               579-828
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 129
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               37, 44
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-854
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               580-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               36, 57
               

               Conread position:
               581-841
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               120, 126
               

               Conread position:
               582-834
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               582-840
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               583-844
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               587-835
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 125
               

               Conread position:
               587-846
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               256, 0
               

               Conread position:
               592-835
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               597-837
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               628-841
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               643-846
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               864-982
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.