Cow genome map
Conread name: | Ss1.1-Pig3-SRG8027G10.5 |
Conread position: | 1-472 |
Cow position: | chr17:22499417-22498945 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 14 |
Conread position: | 1-548 |
Cow position: | chr17:22473231-22473776 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 343 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 98, 32 |
Conread position: | 3-480 |
Cow position: | chr17:22589870-22589392 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 292 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 97, 147 |
Conread position: | 3-481 |
Cow position: | chr17:22452149-22451669 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 300 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 68, 55 |
Conread position: | 3-487 |
Cow position: | chr17:22452233-22451748 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 300 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 96, 398 |
Conread position: | 3-532 |
Cow position: | chr17:22552284-22551754 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 62 |
Conread position: | 4-292 |
Cow position: | chr17:22551779-22551490 (view UCSC Genome Browser custom track) |
Alignm length: | 290 |
Alignm identity: | 181 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 4-388 |
Cow position: | chr17:22589617-22589232 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 251 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 65, 52 |
Conread position: | 4-532 |
Cow position: | chr17:22499246-22498717 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 320 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 13, 8 |
Conread position: | 4-532 |
Cow position: | chr17:22552031-22551502 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 325 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 96, 325 |
Conread position: | 4-532 |
Cow position: | chr17:22552871-22552342 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 327 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 96, 495 |
Conread position: | 4-544 |
Cow position: | chr17:22552367-22551826 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 117 |
Conread position: | 4-545 |
Cow position: | chr17:22452400-22451858 (view UCSC Genome Browser custom track) |
Alignm length: | 545 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 60 |
Conread position: | 7-454 |
Cow position: | chr17:22551942-22551496 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 284 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 92, 7 |
Conread position: | 7-545 |
Cow position: | chr17:22589948-22589411 (view UCSC Genome Browser custom track) |
Alignm length: | 544 |
Alignm identity: | 331 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 92, 6 |
Conread position: | 7-551 |
Cow position: | chr17:22452311-22451768 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 7 |
Conread position: | 7-577 |
Cow position: | chr17:22499073-22498505 (view UCSC Genome Browser custom track) |
Alignm length: | 574 |
Alignm identity: | 351 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 62, 14 |
Conread position: | 14-532 |
Cow position: | chr17:22473409-22473929 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 134 |
Conread position: | 14-534 |
Cow position: | chr17:22552945-22552424 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 178 |
Conread position: | 15-485 |
Cow position: | chr17:22589690-22589219 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 296 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 50, 55 |
Conread position: | 15-532 |
Cow position: | chr17:22552524-22552006 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 56 |
Conread position: | 15-532 |
Cow position: | chr17:22590194-22589676 (view UCSC Genome Browser custom track) |
Alignm length: | 522 |
Alignm identity: | 313 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 56, 50 |
Conread position: | 15-545 |
Cow position: | chr17:22590026-22589495 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 329 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 54, 50 |
Conread position: | 16-360 |
Cow position: | chr17:22589521-22589176 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 214 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 83, 143 |
Conread position: | 16-481 |
Cow position: | chr17:22590109-22589643 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 293 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 84, 135 |
Conread position: | 16-532 |
Cow position: | chr17:22552775-22552258 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 320 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 73, 49 |
Conread position: | 16-544 |
Cow position: | chr17:22552607-22552078 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 333 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 84, 193 |
Conread position: | 16-544 |
Cow position: | chr17:22553027-22552498 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 334 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 83, 162 |
Conread position: | 73-544 |
Cow position: | chr17:22473219-22473688 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 297 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 26, 44 |
Conread position: | 78-544 |
Cow position: | chr17:22499425-22498957 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 277 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 7, 166 |
Conread position: | 189-534 |
Cow position: | chr17:22553105-22552760 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 213 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 150, 139 |
Conread position: | 192-540 |
Cow position: | chr17:22499393-22499045 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 217 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 222-550 |
Cow position: | chr17:22473201-22473526 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 201 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 577-779 |
Cow position: | chr17:22473760-22473963 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 59, 39 |
Conread position: | 577-835 |
Cow position: | chr17:22551922-22551664 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 184 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 39, 60 |
Conread position: | 577-841 |
Cow position: | chr17:22452207-22451943 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 193 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 120, 110 |
Conread position: | 577-841 |
Cow position: | chr17:22452375-22452111 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 48, 60 |
Conread position: | 577-841 |
Cow position: | chr17:22473340-22473604 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 189 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 60, 56 |
Conread position: | 577-841 |
Cow position: | chr17:22473424-22473688 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 179 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 577-841 |
Cow position: | chr17:22473592-22473856 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 184 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 577-841 |
Cow position: | chr17:22498717-22498462 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 176 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 180, 0 |
Conread position: | 577-841 |
Cow position: | chr17:22498969-22498705 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 175 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 577-841 |
Cow position: | chr17:22499053-22498789 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 173 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 577-841 |
Cow position: | chr17:22499221-22498957 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 186 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 210, 206 |
Conread position: | 577-841 |
Cow position: | chr17:22551754-22551490 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 183 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 124, 130 |
Conread position: | 577-841 |
Cow position: | chr17:22552090-22551826 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 188 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 32, 57 |
Conread position: | 577-841 |
Cow position: | chr17:22552174-22551910 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 186 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 32, 50 |
Conread position: | 577-841 |
Cow position: | chr17:22552258-22551994 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 198 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 141 |
Conread position: | 577-841 |
Cow position: | chr17:22552342-22552078 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 59 |
Conread position: | 577-841 |
Cow position: | chr17:22552510-22552246 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 191 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 124, 141 |
Conread position: | 577-841 |
Cow position: | chr17:22552594-22552330 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 192 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 39, 60 |
Conread position: | 577-841 |
Cow position: | chr17:22552678-22552414 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 43, 60 |
Conread position: | 577-841 |
Cow position: | chr17:22552846-22552582 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 181 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 39, 50 |
Conread position: | 577-841 |
Cow position: | chr17:22589592-22589328 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 176 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 113, 109 |
Conread position: | 577-841 |
Cow position: | chr17:22589760-22589496 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 184 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 210, 206 |
Conread position: | 577-841 |
Cow position: | chr17:22589844-22589580 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 177 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 124, 130 |
Conread position: | 577-841 |
Cow position: | chr17:22589928-22589664 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 180 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 577-841 |
Cow position: | chr17:22590012-22589748 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 182 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 124, 130 |
Conread position: | 577-844 |
Cow position: | chr17:22452039-22451772 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 182 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 217, 205 |
Conread position: | 577-844 |
Cow position: | chr17:22499137-22498870 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 179 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 55, 60 |
Conread position: | 577-844 |
Cow position: | chr17:22552006-22551739 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 188 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 39, 60 |
Conread position: | 577-847 |
Cow position: | chr17:22552930-22552659 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 194 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 39, 54 |
Conread position: | 577-848 |
Cow position: | chr17:22473508-22473779 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 191 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 135, 131 |
Conread position: | 577-848 |
Cow position: | chr17:22499305-22499034 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 190 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 578-841 |
Cow position: | chr17:22499388-22499125 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 184 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 578-841 |
Cow position: | chr17:22589507-22589244 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 178 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 42, 59 |
Conread position: | 578-841 |
Cow position: | chr17:22590179-22589916 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 169 |
Alignm E-value: | 7e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 579-826 |
Cow position: | chr17:22451953-22451706 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 167 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 134, 128 |
Conread position: | 579-828 |
Cow position: | chr17:22589422-22589173 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 163 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 32, 58 |
Conread position: | 579-841 |
Cow position: | chr17:22452121-22451859 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 141, 129 |
Conread position: | 579-841 |
Cow position: | chr17:22552760-22552498 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 191 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 37, 44 |
Conread position: | 579-841 |
Cow position: | chr17:22589674-22589412 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 180 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 41, 51 |
Conread position: | 579-841 |
Cow position: | chr17:22590094-22589832 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 179 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 579-854 |
Cow position: | chr17:22498883-22498608 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 202 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 40, 52 |
Conread position: | 580-841 |
Cow position: | chr17:22553011-22552750 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 186 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 36, 57 |
Conread position: | 581-841 |
Cow position: | chr17:22553094-22552834 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 174 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 120, 126 |
Conread position: | 582-834 |
Cow position: | chr17:22473681-22473934 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 186 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 0 |
Conread position: | 582-840 |
Cow position: | chr17:22498796-22498538 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 182 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 583-844 |
Cow position: | chr17:22473262-22473523 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 587-835 |
Cow position: | chr17:22590254-22590006 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 167 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 113, 125 |
Conread position: | 587-846 |
Cow position: | chr17:22452281-22452021 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 179 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 256, 0 |
Conread position: | 592-835 |
Cow position: | chr17:22553167-22552924 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 159 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 23, 38 |
Conread position: | 597-837 |
Cow position: | chr17:22552406-22552166 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 165 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 12, 33 |
Conread position: | 628-841 |
Cow position: | chr17:22452408-22452195 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 85, 80 |
Conread position: | 643-846 |
Cow position: | chr17:22499409-22499203 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 5, 0 |
Conread position: | 864-982 |
Cow position: | chr17:22499330-22499212 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 92 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.