Cow genome map

Conread name: Ss1.1-Pig3-SRG8027G10.5

Conread position: 1-234
Cow position:
Alignm length: 235
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 1-476
Cow position:
Alignm length: 479
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 400

Conread position: 1-534
Cow position:
Alignm length: 538
Alignm identity: 334
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 99, 232

Conread position: 1-544
Cow position:
Alignm length: 548
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 2-340
Cow position:
Alignm length: 340
Alignm identity: 204
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 3-215
Cow position:
Alignm length: 215
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 61

Conread position: 3-544
Cow position:
Alignm length: 544
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 62

Conread position: 4-282
Cow position:
Alignm length: 280
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 9

Conread position: 4-352
Cow position:
Alignm length: 351
Alignm identity: 227
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 96, 10

Conread position: 4-487
Cow position:
Alignm length: 488
Alignm identity: 295
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 96, 233

Conread position: 7-293
Cow position:
Alignm length: 290
Alignm identity: 184
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 6

Conread position: 7-368
Cow position:
Alignm length: 363
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 7

Conread position: 7-487
Cow position:
Alignm length: 484
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 7

Conread position: 7-487
Cow position:
Alignm length: 485
Alignm identity: 309
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 7

Conread position: 7-529
Cow position:
Alignm length: 525
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 7

Conread position: 7-532
Cow position:
Alignm length: 529
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 7

Conread position: 7-533
Cow position:
Alignm length: 529
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 7

Conread position: 7-547
Cow position:
Alignm length: 546
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 7

Conread position: 8-354
Cow position:
Alignm length: 349
Alignm identity: 223
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 15-496
Cow position:
Alignm length: 484
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 145

Conread position: 16-430
Cow position:
Alignm length: 420
Alignm identity: 273
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 84, 138

Conread position: 16-453
Cow position:
Alignm length: 439
Alignm identity: 278
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 84, 0

Conread position: 16-487
Cow position:
Alignm length: 477
Alignm identity: 307
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 60

Conread position: 16-534
Cow position:
Alignm length: 520
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 16-547
Cow position:
Alignm length: 534
Alignm identity: 316
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 131

Conread position: 16-547
Cow position:
Alignm length: 538
Alignm identity: 330
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 84, 134

Conread position: 16-547
Cow position:
Alignm length: 539
Alignm identity: 339
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 84, 137

Conread position: 19-455
Cow position:
Alignm length: 439
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 131

Conread position: 19-547
Cow position:
Alignm length: 531
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 277

Conread position: 20-457
Cow position:
Alignm length: 442
Alignm identity: 269
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 80, 129

Conread position: 20-547
Cow position:
Alignm length: 532
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 93

Conread position: 22-481
Cow position:
Alignm length: 461
Alignm identity: 287
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 79, 0

Conread position: 23-551
Cow position:
Alignm length: 533
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 150

Conread position: 24-532
Cow position:
Alignm length: 512
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 47

Conread position: 28-545
Cow position:
Alignm length: 519
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 28-547
Cow position:
Alignm length: 522
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 301

Conread position: 34-354
Cow position:
Alignm length: 322
Alignm identity: 207
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 38-534
Cow position:
Alignm length: 499
Alignm identity: 309
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 323

Conread position: 78-522
Cow position:
Alignm length: 446
Alignm identity: 280
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 87-532
Cow position:
Alignm length: 451
Alignm identity: 275
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 31, 13

Conread position: 96-547
Cow position:
Alignm length: 454
Alignm identity: 276
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 55

Conread position: 102-551
Cow position:
Alignm length: 451
Alignm identity: 266
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 394, 403

Conread position: 132-506
Cow position:
Alignm length: 376
Alignm identity: 228
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 235, 222

Conread position: 168-532
Cow position:
Alignm length: 365
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 183-551
Cow position:
Alignm length: 369
Alignm identity: 234
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 204-487
Cow position:
Alignm length: 284
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 255-545
Cow position:
Alignm length: 292
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 147, 154

Conread position: 459-841
Cow position:
Alignm length: 385
Alignm identity: 239
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 228, 78

Conread position: 568-812
Cow position:
Alignm length: 246
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 56, 15

Conread position: 575-812
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 204, 0

Conread position: 577-759
Cow position:
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 60

Conread position: 577-784
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 54

Conread position: 577-811
Cow position:
Alignm length: 235
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 577-826
Cow position:
Alignm length: 254
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 110

Conread position: 577-830
Cow position:
Alignm length: 255
Alignm identity: 187
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 39, 54

Conread position: 577-832
Cow position:
Alignm length: 259
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 40

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 182
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 266
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 46

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 60

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 212, 0

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 577-841
Cow position:
Alignm length: 266
Alignm identity: 189
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 55, 60

Conread position: 577-841
Cow position:
Alignm length: 265
Alignm identity: 178
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 577-844
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 39, 60

Conread position: 577-844
Cow position:
Alignm length: 269
Alignm identity: 187
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 47, 60

Conread position: 577-844
Cow position:
Alignm length: 270
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 42

Conread position: 577-844
Cow position:
Alignm length: 269
Alignm identity: 184
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 116, 127

Conread position: 577-844
Cow position:
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 577-845
Cow position:
Alignm length: 269
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 577-848
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 156, 149

Conread position: 578-835
Cow position:
Alignm length: 260
Alignm identity: 172
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 41

Conread position: 578-841
Cow position:
Alignm length: 265
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 43, 59

Conread position: 578-844
Cow position:
Alignm length: 268
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 43

Conread position: 578-847
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 0

Conread position: 578-847
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 240

Conread position: 579-758
Cow position:
Alignm length: 180
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 579-813
Cow position:
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 53

Conread position: 579-830
Cow position:
Alignm length: 252
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 579-840
Cow position:
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 579-840
Cow position:
Alignm length: 264
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 122, 133

Conread position: 579-841
Cow position:
Alignm length: 263
Alignm identity: 188
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 579-841
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 14

Conread position: 579-841
Cow position:
Alignm length: 263
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 579-841
Cow position:
Alignm length: 263
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 579-841
Cow position:
Alignm length: 264
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 58

Conread position: 579-842
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 579-844
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 579-844
Cow position:
Alignm length: 266
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 579-844
Cow position:
Alignm length: 267
Alignm identity: 186
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 37, 44

Conread position: 579-844
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 131, 121

Conread position: 580-841
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 580-844
Cow position:
Alignm length: 267
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 41, 51

Conread position: 581-841
Cow position:
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 43, 56

Conread position: 581-844
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 0

Conread position: 581-848
Cow position:
Alignm length: 268
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 582-752
Cow position:
Alignm length: 172
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 157, 0

Conread position: 582-831
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 204, 212

Conread position: 582-844
Cow position:
Alignm length: 264
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 55

Conread position: 583-844
Cow position:
Alignm length: 262
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 117, 0

Conread position: 583-844
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 36

Conread position: 583-846
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 42, 54

Conread position: 588-841
Cow position:
Alignm length: 256
Alignm identity: 185
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 16, 25

Conread position: 588-844
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 49

Conread position: 588-846
Cow position:
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 255, 0

Conread position: 592-841
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 129, 124

Conread position: 617-841
Cow position:
Alignm length: 228
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 20

Conread position: 632-836
Cow position:
Alignm length: 206
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 20

Conread position: 651-845
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 651-847
Cow position:
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 192, 0

Conread position: 655-844
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 142, 150

Conread position: 656-844
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 665-847
Cow position:
Alignm length: 184
Alignm identity: 131
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 178, 0

Show alignments to all cow chromosomes.