Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8027G10.5
        

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               3-360
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               3-532
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               3-545
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 325
               

               Conread position:
               5-545
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 69
               

               Conread position:
               7-293
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 7
               

               Conread position:
               7-444
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               94, 7
               

               Conread position:
               7-483
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 7
               

               Conread position:
               7-528
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               7-534
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 7
               

               Conread position:
               7-544
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 10
               

               Conread position:
               7-547
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 7
               

               Conread position:
               15-532
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 405
               

               Conread position:
               16-530
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               324
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 417
               

               Conread position:
               16-532
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               325
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               84, 193
               

               Conread position:
               16-532
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 169
               

               Conread position:
               16-547
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 500
               

               Conread position:
               16-551
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 193
               

               Conread position:
               16-551
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 193
               

               Conread position:
               19-551
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 6
               

               Conread position:
               20-234
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               81, 161
               

               Conread position:
               49-355
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               52, 101
               

               Conread position:
               49-545
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 460
               

               Conread position:
               92-388
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               183-545
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               188-545
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               107, 113
               

               Conread position:
               207-532
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               117, 123
               

               Conread position:
               535-844
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-753
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               115, 110
               

               Conread position:
               577-831
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               144, 139
               

               Conread position:
               577-831
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               577-833
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               216, 206
               

               Conread position:
               577-835
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               577-835
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 47
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               120, 109
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               56, 60
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               143, 139
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               56, 60
               

               Conread position:
               577-851
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               132, 122
               

               Conread position:
               578-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               579-827
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 52
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               45, 58
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 133
               

               Conread position:
               579-844
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               581-837
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               586-841
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               587-841
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               27, 44
               

               Conread position:
               588-841
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               588-848
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               18, 35
               

               Conread position:
               588-941
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               597-841
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 40
               

               Conread position:
               624-841
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               157, 15
               

               Conread position:
               628-844
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               62, 58
               

               Conread position:
               636-844
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               642-841
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               850-983
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 8
               

               Conread position:
               864-979
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               864-993
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.