Cow genome map

Conread name: Ss1.1-Pig3-SRG8027G10.5

Conread position: 1-331
Cow position: chr28:33210288-33210620 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 214
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 151

Conread position: 1-496
Cow position: chr28:7757896-7758393 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 271
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 99, 147

Conread position: 1-532
Cow position: chr28:9253079-9253611 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 162

Conread position: 1-545
Cow position: chr28:7757392-7757937 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 191

Conread position: 3-295
Cow position: chr28:7758470-7758763 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 190
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 189

Conread position: 3-489
Cow position: chr28:9290150-9290631 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 301
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 56

Conread position: 4-354
Cow position: chr28:9290315-9290664 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 220
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 96, 64

Conread position: 4-449
Cow position: chr28:7758387-7758832 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 63, 70

Conread position: 4-522
Cow position: chr28:7757815-7758334 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 238

Conread position: 4-532
Cow position: chr28:7757563-7758092 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 417

Conread position: 4-544
Cow position: chr28:7757731-7758272 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 326
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 95, 238

Conread position: 4-545
Cow position: chr28:7757233-7757769 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 331
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 158, 95

Conread position: 13-545
Cow position: chr28:9253007-9253540 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 229

Conread position: 14-294
Cow position: chr28:7810664-7810945 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 60

Conread position: 15-470
Cow position: chr28:9298724-9299177 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 279
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 84

Conread position: 15-479
Cow position: chr28:9299057-9299507 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 286
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 84, 114

Conread position: 16-292
Cow position: chr28:34696323-34696598 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 85, 162

Conread position: 16-294
Cow position: chr28:34679485-34679203 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 187
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 49

Conread position: 16-306
Cow position: chr28:9290410-9290698 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 193
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 84, 57

Conread position: 16-488
Cow position: chr28:9253178-9253652 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 58

Conread position: 16-545
Cow position: chr28:7757659-7758189 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 325
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 132

Conread position: 21-353
Cow position: chr28:9299217-9299550 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 218
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 65, 45

Conread position: 21-410
Cow position: chr28:33210223-33210615 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 238
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 161

Conread position: 88-545
Cow position: chr28:9290151-9290603 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 278
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 84

Conread position: 102-534
Cow position: chr28:9298561-9298991 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 261
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 18

Conread position: 104-497
Cow position: chr28:33210223-33210618 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 236
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 209

Conread position: 577-746
Cow position: chr28:9253443-9253612 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 577-800
Cow position: chr28:9290506-9290728 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 210, 0

Conread position: 577-820
Cow position: chr28:9253359-9253602 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 577-837
Cow position: chr28:7757840-7758100 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 54

Conread position: 577-840
Cow position: chr28:9290176-9290434 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 577-841
Cow position: chr28:7757336-7757600 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 43, 53

Conread position: 577-841
Cow position: chr28:7757588-7757852 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 37, 46

Conread position: 577-841
Cow position: chr28:7757756-7758020 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 115, 110

Conread position: 577-841
Cow position: chr28:7757924-7758188 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 36, 46

Conread position: 577-841
Cow position: chr28:7810352-7810607 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 203, 183

Conread position: 577-841
Cow position: chr28:7810436-7810691 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 46

Conread position: 577-841
Cow position: chr28:9298656-9298917 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 577-841
Cow position: chr28:33210232-33210496 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 35

Conread position: 577-844
Cow position: chr28:7757672-7757939 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 50

Conread position: 577-844
Cow position: chr28:7758008-7758275 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 27, 50

Conread position: 577-844
Cow position: chr28:7810679-7810946 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 36, 46

Conread position: 577-844
Cow position: chr28:9253023-9253290 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 36, 46

Conread position: 577-844
Cow position: chr28:9253107-9253374 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 123, 129

Conread position: 577-844
Cow position: chr28:9253191-9253458 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 577-844
Cow position: chr28:9253275-9253542 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 191
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 577-845
Cow position: chr28:9252939-9253207 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 38, 50

Conread position: 577-846
Cow position: chr28:9299225-9299495 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 186
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 108, 115

Conread position: 577-963
Cow position: chr28:34679472-34679070 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 269
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 144, 88

Conread position: 577-983
Cow position: chr28:7758092-7758506 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 249
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 37, 46

Conread position: 579-805
Cow position: chr28:33210402-33210629 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 24, 40

Conread position: 579-841
Cow position: chr28:9252859-9253119 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 81, 38

Conread position: 579-841
Cow position: chr28:9298823-9299083 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 172
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 44

Conread position: 579-843
Cow position: chr28:7758498-7758762 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 579-844
Cow position: chr28:7758414-7758679 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 579-844
Cow position: chr28:7810597-7810862 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 121, 127

Conread position: 580-840
Cow position: chr28:9290426-9290685 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 107, 42

Conread position: 580-841
Cow position: chr28:34673362-34673623 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 171
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 120, 134

Conread position: 581-826
Cow position: chr28:9290009-9290255 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 34, 128

Conread position: 581-841
Cow position: chr28:7757508-7757768 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 581-844
Cow position: chr28:7757424-7757687 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 56

Conread position: 581-847
Cow position: chr28:11333961-11333695 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 582-841
Cow position: chr28:9290345-9290602 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 205, 30

Conread position: 583-844
Cow position: chr28:7758334-7758595 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 157
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 117, 123

Conread position: 584-828
Cow position: chr28:7758587-7758832 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 51

Conread position: 586-840
Cow position: chr28:34679547-34679290 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 29

Conread position: 588-840
Cow position: chr28:9298582-9298832 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 168
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 83

Conread position: 592-983
Cow position: chr28:7810283-7810689 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 267
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 112

Conread position: 597-835
Cow position: chr28:33210336-33210575 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 93, 107

Conread position: 635-848
Cow position: chr28:9290150-9290359 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 52

Conread position: 636-840
Cow position: chr28:7810570-7810774 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 49

Conread position: 653-841
Cow position: chr28:9299217-9299405 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 653-841
Cow position: chr28:33210223-33210412 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 660-844
Cow position: chr28:7757335-7757519 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 128
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 52

Conread position: 711-983
Cow position: chr28:7810174-7810446 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 62, 100

Conread position: 845-982
Cow position: chr28:9253399-9253536 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.