Cow genome map
| Conread name: | Ss1.1-Pig3-SRG8027G10.5 |
| Conread position: | 1-274 |
| Cow position: | chr7:11600707-11600432 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 68, 52 |
| Conread position: | 1-281 |
| Cow position: | chr7:3180597-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 98, 199 |
| Conread position: | 1-408 |
| Cow position: | chr7:18390390-18390798 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 1-532 |
| Cow position: | chr7:3179841-3180373 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 497 |
| Conread position: | 1-545 |
| Cow position: | chr7:1014417-1014956 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 333 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 99, 147 |
| Conread position: | 1-545 |
| Cow position: | chr7:1014831-1015376 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 334 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 1-545 |
| Cow position: | chr7:18389970-18390515 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 335 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 78, 64 |
| Conread position: | 2-487 |
| Cow position: | chr7:18390223-18390709 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 148 |
| Conread position: | 3-551 |
| Cow position: | chr7:8324963-8325512 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 235 |
| Conread position: | 4-272 |
| Cow position: | chr7:11434508-11434239 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 233 |
| Conread position: | 4-315 |
| Cow position: | chr7:1439954-1440265 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 4-361 |
| Cow position: | chr7:42878625-42878267 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 239 |
| Conread position: | 4-477 |
| Cow position: | chr7:1439704-1440175 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 291 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 95, 64 |
| Conread position: | 4-483 |
| Cow position: | chr7:8325636-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 92, 187 |
| Conread position: | 4-527 |
| Cow position: | chr7:8243617-8244138 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 331 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 73, 59 |
| Conread position: | 4-528 |
| Cow position: | chr7:8243449-8243974 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 91, 60 |
| Conread position: | 4-529 |
| Cow position: | chr7:42878877-42878351 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 333 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 4-532 |
| Cow position: | chr7:42879129-42878600 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 339 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 96, 253 |
| Conread position: | 4-534 |
| Cow position: | chr7:1014336-1014861 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 311 |
| Conread position: | 4-548 |
| Cow position: | chr7:8242946-8243490 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 320 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 95, 145 |
| Conread position: | 4-548 |
| Cow position: | chr7:8325132-8325677 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 88, 61 |
| Conread position: | 4-550 |
| Cow position: | chr7:8325552-8326099 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 348 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 84, 61 |
| Conread position: | 4-551 |
| Cow position: | chr7:11601208-11600660 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 5-551 |
| Cow position: | chr7:42879296-42878749 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 336 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 60, 69 |
| Conread position: | 6-507 |
| Cow position: | chr7:11600952-11600452 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 320 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 65, 8 |
| Conread position: | 7-532 |
| Cow position: | chr7:1014671-1015195 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 327 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 7-532 |
| Cow position: | chr7:3180269-3180793 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 7-545 |
| Cow position: | chr7:3179765-3180302 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 7-546 |
| Cow position: | chr7:42878956-42878418 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 338 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 92, 7 |
| Conread position: | 7-548 |
| Cow position: | chr7:3179933-3180473 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 14-484 |
| Cow position: | chr7:8278257-8278719 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 52 |
| Conread position: | 14-532 |
| Cow position: | chr7:8278005-8278522 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 14-545 |
| Cow position: | chr7:8277837-8278369 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 51 |
| Conread position: | 14-548 |
| Cow position: | chr7:8324890-8325425 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 59 |
| Conread position: | 14-551 |
| Cow position: | chr7:8243208-8243745 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 328 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 58 |
| Conread position: | 15-295 |
| Cow position: | chr7:1015181-1015461 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 85, 266 |
| Conread position: | 15-358 |
| Cow position: | chr7:11600777-11600433 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 84, 221 |
| Conread position: | 15-453 |
| Cow position: | chr7:1015013-1015452 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-483 |
| Cow position: | chr7:42878782-42878313 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 301 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 54, 50 |
| Conread position: | 15-487 |
| Cow position: | chr7:1014929-1015402 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-545 |
| Cow position: | chr7:3180191-3180722 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 226 |
| Conread position: | 15-545 |
| Cow position: | chr7:42879202-42878671 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 66 |
| Conread position: | 16-448 |
| Cow position: | chr7:8325732-8326167 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 16-449 |
| Cow position: | chr7:3180444-3180877 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 57 |
| Conread position: | 16-532 |
| Cow position: | chr7:8277671-8278188 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 319 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 73, 49 |
| Conread position: | 16-550 |
| Cow position: | chr7:8277419-8277954 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 328 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 84, 157 |
| Conread position: | 16-550 |
| Cow position: | chr7:11601028-11600493 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 17-534 |
| Cow position: | chr7:18390154-18390672 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 192 |
| Conread position: | 19-534 |
| Cow position: | chr7:1014267-1014777 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 76, 300 |
| Conread position: | 21-477 |
| Cow position: | chr7:8324729-8325186 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 303 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 73, 44 |
| Conread position: | 21-548 |
| Cow position: | chr7:8243382-8243910 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 314 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 61, 44 |
| Conread position: | 28-545 |
| Cow position: | chr7:1439639-1440159 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 33-545 |
| Cow position: | chr7:3179705-3180218 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 465 |
| Conread position: | 83-545 |
| Cow position: | chr7:3179671-3180134 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 322 |
| Conread position: | 87-551 |
| Cow position: | chr7:18390140-18390605 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 88-551 |
| Cow position: | chr7:8277237-8277703 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 91-529 |
| Cow position: | chr7:1014669-1015108 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 272 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 309 |
| Conread position: | 113-550 |
| Cow position: | chr7:8242804-8243241 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 266 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 59 |
| Conread position: | 577-779 |
| Cow position: | chr7:1440062-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 577-819 |
| Cow position: | chr7:11600679-11600437 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-820 |
| Cow position: | chr7:11434483-11434240 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 577-824 |
| Cow position: | chr7:8325913-8326163 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 232, 0 |
| Conread position: | 577-831 |
| Cow position: | chr7:3180541-3180795 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-834 |
| Cow position: | chr7:1015195-1015452 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-836 |
| Cow position: | chr7:42878600-42878341 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 136, 131 |
| Conread position: | 577-837 |
| Cow position: | chr7:1015027-1015287 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-837 |
| Cow position: | chr7:42878768-42878508 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 115, 110 |
| Conread position: | 577-841 |
| Cow position: | chr7:1014943-1015207 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-841 |
| Cow position: | chr7:3179868-3180133 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 577-841 |
| Cow position: | chr7:8277684-8277948 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-841 |
| Cow position: | chr7:8278104-8278368 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 577-841 |
| Cow position: | chr7:18390166-18390430 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-841 |
| Cow position: | chr7:42878684-42878420 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 43, 60 |
| Conread position: | 577-841 |
| Cow position: | chr7:42878936-42878672 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 577-841 |
| Cow position: | chr7:42879020-42878756 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 130 |
| Conread position: | 577-841 |
| Cow position: | chr7:42879104-42878840 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 577-841 |
| Cow position: | chr7:42879188-42878924 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 577-841 |
| Cow position: | chr7:42879272-42879008 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 577-842 |
| Cow position: | chr7:1439978-1440243 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 129, 110 |
| Conread position: | 577-844 |
| Cow position: | chr7:1014858-1015126 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 61 |
| Conread position: | 577-844 |
| Cow position: | chr7:1439895-1440161 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 577-844 |
| Cow position: | chr7:3179785-3180052 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr7:3180121-3180388 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 577-844 |
| Cow position: | chr7:3180289-3180556 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 231, 237 |
| Conread position: | 577-844 |
| Cow position: | chr7:3180373-3180640 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 577-844 |
| Cow position: | chr7:8277936-8278203 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 40 |
| Conread position: | 577-844 |
| Cow position: | chr7:8325073-8325340 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 577-844 |
| Cow position: | chr7:11600931-11600664 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 123, 132 |
| Conread position: | 577-844 |
| Cow position: | chr7:11601015-11600748 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr7:11601099-11600832 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 60 |
| Conread position: | 577-844 |
| Cow position: | chr7:11601183-11600916 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 577-844 |
| Cow position: | chr7:42878516-42878246 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 56 |
| Conread position: | 577-845 |
| Cow position: | chr7:8243307-8243574 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 577-845 |
| Cow position: | chr7:8243474-8243742 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 577-845 |
| Cow position: | chr7:8277432-8277700 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 47, 60 |
| Conread position: | 577-845 |
| Cow position: | chr7:8324989-8325257 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 577-845 |
| Cow position: | chr7:8325325-8325593 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 577-845 |
| Cow position: | chr7:8325829-8326097 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 51, 56 |
| Conread position: | 577-847 |
| Cow position: | chr7:1014277-1014548 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 577-847 |
| Cow position: | chr7:3180457-3180728 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 577-847 |
| Cow position: | chr7:8242887-8243158 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 51 |
| Conread position: | 577-847 |
| Cow position: | chr7:8324821-8325091 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 143, 122 |
| Conread position: | 577-848 |
| Cow position: | chr7:1439474-1439748 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 203, 110 |
| Conread position: | 577-848 |
| Cow position: | chr7:3180205-3180476 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 60 |
| Conread position: | 577-848 |
| Cow position: | chr7:8243055-8243326 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 63, 53 |
| Conread position: | 577-848 |
| Cow position: | chr7:8243642-8243913 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 60 |
| Conread position: | 577-848 |
| Cow position: | chr7:8243810-8244079 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 57, 40 |
| Conread position: | 577-848 |
| Cow position: | chr7:8277600-8277871 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 577-848 |
| Cow position: | chr7:8324905-8325176 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 195 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 31, 56 |
| Conread position: | 577-848 |
| Cow position: | chr7:8325157-8325428 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 577-848 |
| Cow position: | chr7:8325409-8325680 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 143, 134 |
| Conread position: | 577-848 |
| Cow position: | chr7:8325493-8325764 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 577-848 |
| Cow position: | chr7:8325661-8325932 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 577-850 |
| Cow position: | chr7:8278188-8278460 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 40 |
| Conread position: | 577-925 |
| Cow position: | chr7:8278356-8278719 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 79 |
| Conread position: | 578-844 |
| Cow position: | chr7:1015112-1015378 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 578-844 |
| Cow position: | chr7:3179954-3180220 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 578-844 |
| Cow position: | chr7:8243559-8243825 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 47, 59 |
| Conread position: | 578-844 |
| Cow position: | chr7:8277853-8278119 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 578-845 |
| Cow position: | chr7:8242804-8243071 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 59 |
| Conread position: | 578-845 |
| Cow position: | chr7:8325242-8325509 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 227, 206 |
| Conread position: | 578-848 |
| Cow position: | chr7:8243140-8243409 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 578-848 |
| Cow position: | chr7:18390251-18390521 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 578-983 |
| Cow position: | chr7:11434811-11434389 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 273 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 144, 137 |
| Conread position: | 579-778 |
| Cow position: | chr7:8277266-8277465 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 41 |
| Conread position: | 579-787 |
| Cow position: | chr7:18390588-18390796 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 141, 137 |
| Conread position: | 579-836 |
| Cow position: | chr7:18390420-18390677 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-839 |
| Cow position: | chr7:18390504-18390764 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr7:1014777-1015042 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr7:1439560-1439827 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 122, 57 |
| Conread position: | 579-844 |
| Cow position: | chr7:11600761-11600496 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr7:18390336-18390601 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-844 |
| Cow position: | chr7:42878850-42878585 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 579-847 |
| Cow position: | chr7:3180039-3180308 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 264, 0 |
| Conread position: | 579-848 |
| Cow position: | chr7:8243392-8243661 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 579-848 |
| Cow position: | chr7:8277770-8278039 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 579-848 |
| Cow position: | chr7:8278022-8278291 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 579-848 |
| Cow position: | chr7:8324739-8325008 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 217, 225 |
| Conread position: | 580-844 |
| Cow position: | chr7:1014694-1014958 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 582-841 |
| Cow position: | chr7:1439817-1440074 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 582-845 |
| Cow position: | chr7:8277521-8277784 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 128, 117 |
| Conread position: | 582-848 |
| Cow position: | chr7:8277353-8277619 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 583-841 |
| Cow position: | chr7:11600841-11600583 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 204, 200 |
| Conread position: | 584-973 |
| Cow position: | chr7:1014368-1014775 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 271 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 203, 197 |
| Conread position: | 587-844 |
| Cow position: | chr7:8242981-8243238 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 27 |
| Conread position: | 588-844 |
| Cow position: | chr7:3179712-3179968 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 632-841 |
| Cow position: | chr7:1439443-1439652 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 636-847 |
| Cow position: | chr7:11434508-11434296 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 636-848 |
| Cow position: | chr7:1438312-1438524 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 638-844 |
| Cow position: | chr7:1014668-1014874 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 49, 66 |
| Conread position: | 640-841 |
| Cow position: | chr7:18390145-18390346 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 642-844 |
| Cow position: | chr7:11601202-11601000 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 145, 141 |
| Conread position: | 644-846 |
| Cow position: | chr7:1014260-1014463 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 199, 0 |
| Conread position: | 651-845 |
| Cow position: | chr7:11434822-11434628 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 147, 155 |
| Conread position: | 653-844 |
| Cow position: | chr7:8324729-8324920 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 64, 47 |
| Conread position: | 653-848 |
| Cow position: | chr7:8277256-8277451 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 657-841 |
| Cow position: | chr7:42879276-42879092 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 854-983 |
| Cow position: | chr7:1015244-1015373 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 859-983 |
| Cow position: | chr7:3180007-3180131 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 864-975 |
| Cow position: | chr7:1015086-1015197 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 89 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 864-979 |
| Cow position: | chr7:3180264-3180379 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 870-979 |
| Cow position: | chr7:3180690-3180799 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.