Cow genome map


           Conread name:
           Ss1.1-Pig3-SRG8027G10.5
        

               Conread position:
               1-431
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               303
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               98, 400
               

               Conread position:
               1-544
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               3-544
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               336
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               96, 188
               

               Conread position:
               3-551
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               341
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               96, 102
               

               Conread position:
               4-274
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 70
               

               Conread position:
               4-400
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               96, 238
               

               Conread position:
               4-466
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               4-482
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 33
               

               Conread position:
               4-532
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 70
               

               Conread position:
               4-533
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 402
               

               Conread position:
               4-544
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               331
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               62, 92
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 238
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               332
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               95, 253
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               4-547
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               339
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               7-481
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 7
               

               Conread position:
               7-483
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 7
               

               Conread position:
               7-532
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               318
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               25, 7
               

               Conread position:
               7-548
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 7
               

               Conread position:
               7-551
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               331
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               94, 7
               

               Conread position:
               8-481
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               87, 153
               

               Conread position:
               8-547
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               338
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               92, 142
               

               Conread position:
               14-354
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               14-482
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 419
               

               Conread position:
               14-487
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               14-532
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               15-532
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               322
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               16-387
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               85, 314
               

               Conread position:
               17-546
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               320
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               49-546
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               304
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               100-545
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               107-532
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               191-545
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               213-441
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-827
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               38, 57
               

               Conread position:
               577-832
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 116
               

               Conread position:
               577-835
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-835
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-836
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-836
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-840
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 46
               

               Conread position:
               577-840
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               127, 121
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 129
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               124, 129
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               37, 57
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               37, 46
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               55, 60
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-845
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               115, 110
               

               Conread position:
               577-846
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               194
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               30, 36
               

               Conread position:
               577-847
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-849
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               577-853
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               130, 135
               

               Conread position:
               578-837
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 128
               

               Conread position:
               578-841
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               578-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               578-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               123, 128
               

               Conread position:
               578-848
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-835
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 58
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               579-841
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 5
               

               Conread position:
               579-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               192
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               579-844
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 5
               

               Conread position:
               579-848
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 58
               

               Conread position:
               579-848
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               581-834
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               581-841
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               582-835
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               582-835
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               110, 105
               

               Conread position:
               583-844
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               596-822
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               634-846
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 66
               

               Conread position:
               643-834
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               649-844
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 39
               

               Conread position:
               657-836
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 51
               

               Conread position:
               660-841
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               82, 77
               

               Conread position:
               678-847
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               840-979
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               864-979
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               864-979
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.