Cow genome map
Conread name: | Ss1.1-Pig3-SRG8028K16.5 |
Conread position: | 1-141 |
Cow position: | chr12:9766885-9767020 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 62, 109 |
Conread position: | 1-141 |
Cow position: | chr12:16670259-16670119 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 58, 65 |
Conread position: | 1-148 |
Cow position: | chr12:17269794-17269646 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-156 |
Cow position: | chr12:37169954-37170104 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 125 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-161 |
Cow position: | chr12:30170660-30170502 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 1-161 |
Cow position: | chr12:35669478-35669639 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 116 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 1-161 |
Cow position: | chr12:45820374-45820525 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 110, 0 |
Conread position: | 1-163 |
Cow position: | chr12:730944-731105 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 119 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 1-163 |
Cow position: | chr12:27037458-27037613 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 1-163 |
Cow position: | chr12:39486416-39486265 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 1-163 |
Cow position: | chr12:42784301-42784139 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 115 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-164 |
Cow position: | chr12:6164030-6164194 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 1-165 |
Cow position: | chr12:2813219-2813056 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 10, 15 |
Conread position: | 1-165 |
Cow position: | chr12:3579278-3579114 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 118 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 79, 24 |
Conread position: | 1-165 |
Cow position: | chr12:8710813-8710656 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 126 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 1-165 |
Cow position: | chr12:15089508-15089344 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 132 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 62, 107 |
Conread position: | 1-165 |
Cow position: | chr12:17031607-17031445 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 1-165 |
Cow position: | chr12:18577831-18577676 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 1-165 |
Cow position: | chr12:19691239-19691404 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 76, 0 |
Conread position: | 1-165 |
Cow position: | chr12:20776929-20777092 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 152, 0 |
Conread position: | 1-165 |
Cow position: | chr12:25561362-25561202 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 129 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-165 |
Cow position: | chr12:26317457-26317293 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 74, 138 |
Conread position: | 1-165 |
Cow position: | chr12:29770580-29770743 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 126 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 78, 0 |
Conread position: | 1-165 |
Cow position: | chr12:32715037-32714874 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 120 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-165 |
Cow position: | chr12:37770869-37770706 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 128 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 69, 84 |
Conread position: | 1-165 |
Cow position: | chr12:38454901-38454747 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 128 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 1-165 |
Cow position: | chr12:40910297-40910459 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 121 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 74, 56 |
Conread position: | 1-169 |
Cow position: | chr12:17001250-17001088 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 1-176 |
Cow position: | chr12:32169532-32169359 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 129 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 59, 11 |
Conread position: | 2-162 |
Cow position: | chr12:18420931-18421090 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 126 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 72, 99 |
Conread position: | 3-161 |
Cow position: | chr12:11056865-11056714 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 3-165 |
Cow position: | chr12:6720317-6720153 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 4-162 |
Cow position: | chr12:5631890-5632043 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 62, 54 |
Conread position: | 4-165 |
Cow position: | chr12:8868886-8869047 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 116 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 4-165 |
Cow position: | chr12:44622344-44622184 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 117 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 4-181 |
Cow position: | chr12:42879683-42879508 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 160, 61 |
Conread position: | 5-164 |
Cow position: | chr12:5906044-5905886 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 126 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 132, 0 |
Conread position: | 5-165 |
Cow position: | chr12:18518661-18518496 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 130 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 56, 115 |
Conread position: | 8-165 |
Cow position: | chr12:4116474-4116323 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 8-165 |
Cow position: | chr12:18388305-18388452 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 8-165 |
Cow position: | chr12:29411504-29411659 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 10-165 |
Cow position: | chr12:28471622-28471468 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 66, 47 |
Conread position: | 11-180 |
Cow position: | chr12:15122306-15122135 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 58, 35 |
Conread position: | 15-165 |
Cow position: | chr12:30745699-30745546 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 37, 109 |
Conread position: | 27-165 |
Cow position: | chr12:5714596-5714458 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 52-181 |
Cow position: | chr12:38010117-38010247 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 115, 20 |
Show alignments to all cow chromosomes.