Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-141
Cow position: chr12:9766885-9767020 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 109

Conread position: 1-141
Cow position: chr12:16670259-16670119 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 65

Conread position: 1-148
Cow position: chr12:17269794-17269646 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 1-156
Cow position: chr12:37169954-37170104 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 1-161
Cow position: chr12:30170660-30170502 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 1-161
Cow position: chr12:35669478-35669639 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 1-161
Cow position: chr12:45820374-45820525 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 110, 0

Conread position: 1-163
Cow position: chr12:730944-731105 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 1-163
Cow position: chr12:27037458-27037613 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 1-163
Cow position: chr12:39486416-39486265 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-163
Cow position: chr12:42784301-42784139 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr12:6164030-6164194 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 1-165
Cow position: chr12:2813219-2813056 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 15

Conread position: 1-165
Cow position: chr12:3579278-3579114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 24

Conread position: 1-165
Cow position: chr12:8710813-8710656 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 1-165
Cow position: chr12:15089508-15089344 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 107

Conread position: 1-165
Cow position: chr12:17031607-17031445 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 1-165
Cow position: chr12:18577831-18577676 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 1-165
Cow position: chr12:19691239-19691404 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 1-165
Cow position: chr12:20776929-20777092 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 152, 0

Conread position: 1-165
Cow position: chr12:25561362-25561202 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr12:26317457-26317293 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 74, 138

Conread position: 1-165
Cow position: chr12:29770580-29770743 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 1-165
Cow position: chr12:32715037-32714874 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 1-165
Cow position: chr12:37770869-37770706 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 84

Conread position: 1-165
Cow position: chr12:38454901-38454747 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-165
Cow position: chr12:40910297-40910459 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 74, 56

Conread position: 1-169
Cow position: chr12:17001250-17001088 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 1-176
Cow position: chr12:32169532-32169359 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 11

Conread position: 2-162
Cow position: chr12:18420931-18421090 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 72, 99

Conread position: 3-161
Cow position: chr12:11056865-11056714 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 3-165
Cow position: chr12:6720317-6720153 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 4-162
Cow position: chr12:5631890-5632043 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 54

Conread position: 4-165
Cow position: chr12:8868886-8869047 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 4-165
Cow position: chr12:44622344-44622184 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 4-181
Cow position: chr12:42879683-42879508 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 160, 61

Conread position: 5-164
Cow position: chr12:5906044-5905886 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 132, 0

Conread position: 5-165
Cow position: chr12:18518661-18518496 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 115

Conread position: 8-165
Cow position: chr12:4116474-4116323 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 8-165
Cow position: chr12:18388305-18388452 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 8-165
Cow position: chr12:29411504-29411659 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 10-165
Cow position: chr12:28471622-28471468 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 66, 47

Conread position: 11-180
Cow position: chr12:15122306-15122135 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 35

Conread position: 15-165
Cow position: chr12:30745699-30745546 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 109

Conread position: 27-165
Cow position: chr12:5714596-5714458 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 52-181
Cow position: chr12:38010117-38010247 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 20

Show alignments to all cow chromosomes.