Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-125
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 1-130
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 1-142
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 77

Conread position: 1-148
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 1-149
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-155
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 64, 0

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-161
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 64, 100

Conread position: 1-161
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 1-162
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 74, 0

Conread position: 1-162
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 108

Conread position: 1-162
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 76, 52

Conread position: 1-163
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 61, 25

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 127
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 1-163
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 52, 59

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-164
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 67, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 55

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 69, 61

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 111

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 40

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 61, 99

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 110, 0

Conread position: 1-165
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 72, 56

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 131
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 76, 111

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 64

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 72

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 1-165
Cow position:
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 142, 58

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 69, 25

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 94, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 137, 40

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 110, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 111

Conread position: 1-165
Cow position:
Alignm length: 168
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 73

Conread position: 1-165
Cow position:
Alignm length: 171
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 63

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 67, 58

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 1-167
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 68, 113

Conread position: 1-174
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 57

Conread position: 1-176
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 68, 90

Conread position: 1-190
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 18, 43

Conread position: 1-200
Cow position:
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 131, 50

Conread position: 2-156
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 2-163
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 0

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 109, 0

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-159
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 26

Conread position: 3-163
Cow position:
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 3-165
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 67, 143

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 135, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 72, 0

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 4-165
Cow position:
Alignm length: 163
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 58, 108

Conread position: 4-165
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 81

Conread position: 5-162
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 35

Conread position: 5-162
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 33

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 64, 33

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 54

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 65

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 127
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 54

Conread position: 6-163
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 7-163
Cow position:
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 8-164
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 50

Conread position: 8-165
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 10-165
Cow position:
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 0

Conread position: 11-165
Cow position:
Alignm length: 157
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 142, 53

Conread position: 13-165
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 14-161
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 14-162
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 14-165
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 133, 43

Conread position: 14-165
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 52

Conread position: 16-166
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 17-165
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 19-165
Cow position:
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 19-165
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 19-165
Cow position:
Alignm length: 147
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-165
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 24-165
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 27-164
Cow position:
Alignm length: 138
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 27-165
Cow position:
Alignm length: 139
Alignm identity: 113
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 35-165
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 48-165
Cow position:
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 23, 102

Conread position: 48-165
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 52-165
Cow position:
Alignm length: 114
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 60-165
Cow position:
Alignm length: 110
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 60-165
Cow position:
Alignm length: 106
Alignm identity: 86
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.