Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-132
Cow position: chr22:34104645-34104777 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-138
Cow position: chr22:285335-285467 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 1-151
Cow position: chr22:12341224-12341074 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-152
Cow position: chr22:12527093-12527247 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 66, 43

Conread position: 1-159
Cow position: chr22:18259249-18259095 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 1-160
Cow position: chr22:7885017-7884859 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 1-161
Cow position: chr22:34735891-34735737 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 51

Conread position: 1-161
Cow position: chr22:39696315-39696160 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 76, 56

Conread position: 1-162
Cow position: chr22:1563223-1563382 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 58, 75

Conread position: 1-162
Cow position: chr22:4645800-4645641 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 1-162
Cow position: chr22:26097592-26097752 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 1-162
Cow position: chr22:42635405-42635563 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 81

Conread position: 1-163
Cow position: chr22:590366-590206 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 1-163
Cow position: chr22:891115-891270 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 55

Conread position: 1-163
Cow position: chr22:4119535-4119698 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 1-163
Cow position: chr22:5616329-5616171 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 147, 56

Conread position: 1-163
Cow position: chr22:13011241-13011402 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 15, 59

Conread position: 1-163
Cow position: chr22:19827836-19827998 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 129, 88

Conread position: 1-163
Cow position: chr22:30699208-30699046 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 132

Conread position: 1-163
Cow position: chr22:40048584-40048423 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 29, 137

Conread position: 1-164
Cow position: chr22:226427-226586 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 1-164
Cow position: chr22:1591051-1590889 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 71, 0

Conread position: 1-164
Cow position: chr22:17764409-17764246 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position: chr22:25387354-25387190 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 60, 132

Conread position: 1-164
Cow position: chr22:36432943-36433103 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 104

Conread position: 1-165
Cow position: chr22:1067887-1068048 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 1-165
Cow position: chr22:1874719-1874558 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 74, 56

Conread position: 1-165
Cow position: chr22:3250967-3251128 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr22:3317148-3316987 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 79, 56

Conread position: 1-165
Cow position: chr22:3993637-3993477 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-165
Cow position: chr22:4017504-4017342 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 73, 56

Conread position: 1-165
Cow position: chr22:9283571-9283733 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr22:10315106-10314940 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 62

Conread position: 1-165
Cow position: chr22:10421059-10420896 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 1-165
Cow position: chr22:10631413-10631241 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 1-165
Cow position: chr22:10685061-10685223 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 1-165
Cow position: chr22:12803358-12803520 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 143, 0

Conread position: 1-165
Cow position: chr22:14638453-14638616 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 75

Conread position: 1-165
Cow position: chr22:15039157-15039317 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr22:15090769-15090605 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 57

Conread position: 1-165
Cow position: chr22:15567989-15568149 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 37

Conread position: 1-165
Cow position: chr22:17152704-17152546 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 1-165
Cow position: chr22:18021005-18021156 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 1-165
Cow position: chr22:21502772-21502608 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 74, 98

Conread position: 1-165
Cow position: chr22:22160753-22160589 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr22:24066202-24066369 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 131

Conread position: 1-165
Cow position: chr22:25221868-25222034 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 1-165
Cow position: chr22:27292118-27291960 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 41

Conread position: 1-165
Cow position: chr22:28071586-28071423 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 159, 0

Conread position: 1-165
Cow position: chr22:31646519-31646358 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 104

Conread position: 1-165
Cow position: chr22:34632162-34632002 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-165
Cow position: chr22:41270974-41271134 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 135
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr22:41982691-41982850 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position: chr22:43812394-43812554 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 58

Conread position: 1-165
Cow position: chr22:45846170-45846011 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 1-166
Cow position: chr22:6327742-6327903 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 1-166
Cow position: chr22:44717748-44717576 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 1-169
Cow position: chr22:13300438-13300274 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 54, 64

Conread position: 1-170
Cow position: chr22:21355114-21355278 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 1-181
Cow position: chr22:21393291-21393471 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 165, 63

Conread position: 2-160
Cow position: chr22:4563388-4563230 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 98, 70

Conread position: 2-165
Cow position: chr22:4043959-4043797 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 101

Conread position: 2-165
Cow position: chr22:16094877-16095036 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 3-164
Cow position: chr22:22613131-22612977 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 3-165
Cow position: chr22:912123-911963 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 62

Conread position: 3-165
Cow position: chr22:11613449-11613289 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 146, 45

Conread position: 3-165
Cow position: chr22:38439132-38439289 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 70

Conread position: 3-165
Cow position: chr22:43119704-43119863 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 3-165
Cow position: chr22:45807862-45807705 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 3-182
Cow position: chr22:28640126-28640302 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 4-162
Cow position: chr22:7882579-7882422 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 0

Conread position: 4-164
Cow position: chr22:26151088-26151245 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 4-165
Cow position: chr22:17993007-17993167 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 66

Conread position: 4-165
Cow position: chr22:27267565-27267405 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 4-165
Cow position: chr22:28370970-28370812 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 121

Conread position: 4-165
Cow position: chr22:32480456-32480614 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 5-164
Cow position: chr22:28058027-28058187 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 53

Conread position: 5-165
Cow position: chr22:21295701-21295859 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 7-165
Cow position: chr22:9127429-9127271 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 62, 41

Conread position: 8-165
Cow position: chr22:36569531-36569684 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 11-165
Cow position: chr22:41971137-41971292 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 135

Conread position: 14-161
Cow position: chr22:7967722-7967571 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 54

Conread position: 14-165
Cow position: chr22:864501-864653 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 124, 0

Conread position: 14-165
Cow position: chr22:26141292-26141141 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 45

Conread position: 18-165
Cow position: chr22:2623508-2623654 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 20-164
Cow position: chr22:6360478-6360623 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 20-164
Cow position: chr22:27066402-27066258 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 18

Conread position: 23-163
Cow position: chr22:17224664-17224797 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 34-165
Cow position: chr22:9734847-9734719 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 51-165
Cow position: chr22:19848413-19848530 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 58-165
Cow position: chr22:7252669-7252777 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 66-162
Cow position: chr22:43397977-43397881 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.