Cow genome map
Conread name: | Ss1.1-Pig3-SRG8028K16.5 |
Conread position: | 1-122 |
Cow position: | chr23:3293728-3293605 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 97 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1-143 |
Cow position: | chr23:1222204-1222347 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 113 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 1-155 |
Cow position: | chr23:33717508-33717660 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 111 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 1-159 |
Cow position: | chr23:1438325-1438173 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 44, 57 |
Conread position: | 1-161 |
Cow position: | chr23:5426466-5426305 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 121 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-162 |
Cow position: | chr23:29626449-29626288 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 118 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-163 |
Cow position: | chr23:16664537-16664694 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 70, 111 |
Conread position: | 1-163 |
Cow position: | chr23:17404872-17404711 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 1-164 |
Cow position: | chr23:2801650-2801813 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 56 |
Conread position: | 1-165 |
Cow position: | chr23:534260-534099 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 130 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 1-165 |
Cow position: | chr23:1290330-1290166 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 122 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 61, 47 |
Conread position: | 1-165 |
Cow position: | chr23:1720950-1721114 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 119 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 65, 23 |
Conread position: | 1-165 |
Cow position: | chr23:1883427-1883264 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 131 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 1-165 |
Cow position: | chr23:3918064-3918228 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 119 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 58, 18 |
Conread position: | 1-165 |
Cow position: | chr23:4980513-4980675 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 1-165 |
Cow position: | chr23:5732584-5732420 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-165 |
Cow position: | chr23:11473475-11473634 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 66, 6 |
Conread position: | 1-165 |
Cow position: | chr23:12363585-12363748 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 132 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 1-165 |
Cow position: | chr23:15743124-15742962 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 1-165 |
Cow position: | chr23:16881130-16881292 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 139 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 1-165 |
Cow position: | chr23:18902019-18902177 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 121 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 1-165 |
Cow position: | chr23:20744560-20744721 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 1-165 |
Cow position: | chr23:29459066-29459219 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-165 |
Cow position: | chr23:31493897-31493742 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 122 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 1-165 |
Cow position: | chr23:39806905-39806740 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 122 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 58, 146 |
Conread position: | 1-166 |
Cow position: | chr23:18286225-18286067 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 123 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 1-167 |
Cow position: | chr23:6367643-6367479 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 122 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 95, 142 |
Conread position: | 1-206 |
Cow position: | chr23:5795510-5795309 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 153 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 58, 13 |
Conread position: | 2-126 |
Cow position: | chr23:1697707-1697586 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 2-149 |
Cow position: | chr23:1876743-1876597 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 2-162 |
Cow position: | chr23:11045519-11045359 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 2-165 |
Cow position: | chr23:1776602-1776759 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 2-165 |
Cow position: | chr23:3282090-3282245 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 119 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 2-165 |
Cow position: | chr23:21764954-21764788 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 15, 109 |
Conread position: | 2-165 |
Cow position: | chr23:24509726-24509572 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 2-165 |
Cow position: | chr23:24867341-24867176 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 132 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 2-165 |
Cow position: | chr23:35938377-35938212 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 88, 63 |
Conread position: | 3-136 |
Cow position: | chr23:24966432-24966559 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 109 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 71, 62 |
Conread position: | 3-165 |
Cow position: | chr23:3433880-3434040 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 119 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 3-165 |
Cow position: | chr23:7845324-7845163 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 127 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 4-165 |
Cow position: | chr23:14164368-14164531 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 117 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 4-165 |
Cow position: | chr23:26942472-26942308 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 117 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 5-163 |
Cow position: | chr23:2501825-2501981 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 5-166 |
Cow position: | chr23:11081285-11081127 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 66, 54 |
Conread position: | 7-165 |
Cow position: | chr23:2282152-2282304 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 121 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 8-164 |
Cow position: | chr23:21502611-21502766 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 120 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 60, 104 |
Conread position: | 8-165 |
Cow position: | chr23:29034344-29034187 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 119 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 11-164 |
Cow position: | chr23:15056619-15056771 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 112 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 11-165 |
Cow position: | chr23:21452707-21452861 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 60, 46 |
Conread position: | 14-157 |
Cow position: | chr23:40334128-40334269 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 14-165 |
Cow position: | chr23:26632824-26632673 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 114 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 74, 48 |
Conread position: | 19-163 |
Cow position: | chr23:14191569-14191425 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 50, 38 |
Conread position: | 28-165 |
Cow position: | chr23:24809657-24809795 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 32-159 |
Cow position: | chr23:9132444-9132567 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 37, 26 |
Conread position: | 32-164 |
Cow position: | chr23:406170-406296 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 33-165 |
Cow position: | chr23:4329674-4329811 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 38-165 |
Cow position: | chr23:2259596-2259726 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 21, 0 |
Show alignments to all cow chromosomes.