Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-122
Cow position: chr23:3293728-3293605 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-143
Cow position: chr23:1222204-1222347 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 70, 0

Conread position: 1-155
Cow position: chr23:33717508-33717660 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 1-159
Cow position: chr23:1438325-1438173 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 57

Conread position: 1-161
Cow position: chr23:5426466-5426305 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 1-162
Cow position: chr23:29626449-29626288 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr23:16664537-16664694 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 111

Conread position: 1-163
Cow position: chr23:17404872-17404711 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 1-164
Cow position: chr23:2801650-2801813 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 56

Conread position: 1-165
Cow position: chr23:534260-534099 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 29

Conread position: 1-165
Cow position: chr23:1290330-1290166 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 47

Conread position: 1-165
Cow position: chr23:1720950-1721114 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 65, 23

Conread position: 1-165
Cow position: chr23:1883427-1883264 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 1-165
Cow position: chr23:3918064-3918228 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 18

Conread position: 1-165
Cow position: chr23:4980513-4980675 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 1-165
Cow position: chr23:5732584-5732420 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr23:11473475-11473634 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 6

Conread position: 1-165
Cow position: chr23:12363585-12363748 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position: chr23:15743124-15742962 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr23:16881130-16881292 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 139
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position: chr23:18902019-18902177 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-165
Cow position: chr23:20744560-20744721 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 1-165
Cow position: chr23:29459066-29459219 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr23:31493897-31493742 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position: chr23:39806905-39806740 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 146

Conread position: 1-166
Cow position: chr23:18286225-18286067 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-167
Cow position: chr23:6367643-6367479 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 142

Conread position: 1-206
Cow position: chr23:5795510-5795309 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 58, 13

Conread position: 2-126
Cow position: chr23:1697707-1697586 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 2-149
Cow position: chr23:1876743-1876597 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 2-162
Cow position: chr23:11045519-11045359 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 2-165
Cow position: chr23:1776602-1776759 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 2-165
Cow position: chr23:3282090-3282245 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 0

Conread position: 2-165
Cow position: chr23:21764954-21764788 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 109

Conread position: 2-165
Cow position: chr23:24509726-24509572 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 2-165
Cow position: chr23:24867341-24867176 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 2-165
Cow position: chr23:35938377-35938212 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 63

Conread position: 3-136
Cow position: chr23:24966432-24966559 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 62

Conread position: 3-165
Cow position: chr23:3433880-3434040 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 3-165
Cow position: chr23:7845324-7845163 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 4-165
Cow position: chr23:14164368-14164531 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 4-165
Cow position: chr23:26942472-26942308 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 5-163
Cow position: chr23:2501825-2501981 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 5-166
Cow position: chr23:11081285-11081127 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 54

Conread position: 7-165
Cow position: chr23:2282152-2282304 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 8-164
Cow position: chr23:21502611-21502766 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 104

Conread position: 8-165
Cow position: chr23:29034344-29034187 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 11-164
Cow position: chr23:15056619-15056771 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 11-165
Cow position: chr23:21452707-21452861 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 60, 46

Conread position: 14-157
Cow position: chr23:40334128-40334269 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 14-165
Cow position: chr23:26632824-26632673 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 74, 48

Conread position: 19-163
Cow position: chr23:14191569-14191425 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 38

Conread position: 28-165
Cow position: chr23:24809657-24809795 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 32-159
Cow position: chr23:9132444-9132567 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 26

Conread position: 32-164
Cow position: chr23:406170-406296 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 33-165
Cow position: chr23:4329674-4329811 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 38-165
Cow position: chr23:2259596-2259726 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.