Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-109
Cow position:
Alignm length: 110
Alignm identity: 94
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 1-125
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 1-150
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-151
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 114, 143

Conread position: 1-156
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 1-161
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 48

Conread position: 1-162
Cow position:
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 64, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 67, 0

Conread position: 1-163
Cow position:
Alignm length: 163
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-164
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 1-164
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 1-164
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 40

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 110

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 57, 64

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 1-165
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 1-165
Cow position:
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 58

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 110, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 142, 70

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 57

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 124
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 135, 0

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 72, 51

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 72, 43

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 1-165
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 40

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 1-165
Cow position:
Alignm length: 166
Alignm identity: 133
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 70, 33

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position:
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1-166
Cow position:
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 1-169
Cow position:
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 53, 0

Conread position: 1-173
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 16, 28

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 133
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 2-165
Cow position:
Alignm length: 165
Alignm identity: 135
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 76, 0

Conread position: 2-165
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 108

Conread position: 2-165
Cow position:
Alignm length: 164
Alignm identity: 135
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 63, 0

Conread position: 2-177
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 107

Conread position: 3-162
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 126
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 65, 98

Conread position: 3-165
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 70, 0

Conread position: 3-165
Cow position:
Alignm length: 168
Alignm identity: 138
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 61, 113

Conread position: 3-165
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 56

Conread position: 3-165
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 38

Conread position: 3-166
Cow position:
Alignm length: 164
Alignm identity: 127
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 4-181
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 164, 66

Conread position: 5-165
Cow position:
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 54

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 84

Conread position: 5-165
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 65

Conread position: 5-165
Cow position:
Alignm length: 161
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 6-165
Cow position:
Alignm length: 160
Alignm identity: 120
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 6-165
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 7-164
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 10-165
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 82

Conread position: 11-165
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 43

Conread position: 11-165
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 101

Conread position: 11-212
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 155, 96

Conread position: 14-162
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 14-165
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 14-165
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 11

Conread position: 14-165
Cow position:
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 14-165
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 6

Conread position: 15-165
Cow position:
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 19-165
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 52

Conread position: 19-182
Cow position:
Alignm length: 170
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 46

Conread position: 22-151
Cow position:
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 24-165
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 50

Conread position: 27-168
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 11

Conread position: 28-164
Cow position:
Alignm length: 138
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 34-164
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 35-165
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 58-164
Cow position:
Alignm length: 109
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 68

Conread position: 70-165
Cow position:
Alignm length: 96
Alignm identity: 82
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 0

Show alignments to all cow chromosomes.