Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-139
Cow position: chr8:29262822-29262680 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 1-142
Cow position: chr8:46082210-46082069 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 1-142
Cow position: chr8:55871658-55871800 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 1-150
Cow position: chr8:31985304-31985159 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 73, 63

Conread position: 1-152
Cow position: chr8:32967829-32967679 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 1-153
Cow position: chr8:14383150-14383298 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 1-159
Cow position: chr8:19284541-19284386 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 17

Conread position: 1-160
Cow position: chr8:8190023-8190182 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr8:10970875-10970712 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 68, 112

Conread position: 1-163
Cow position: chr8:25579578-25579418 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 0

Conread position: 1-163
Cow position: chr8:26386175-26386338 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 26

Conread position: 1-163
Cow position: chr8:28294806-28294961 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 1-163
Cow position: chr8:33640406-33640243 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 1-163
Cow position: chr8:39630816-39630655 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 64, 93

Conread position: 1-164
Cow position: chr8:8986904-8987063 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 57

Conread position: 1-164
Cow position: chr8:12214048-12213893 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 1-164
Cow position: chr8:54147707-54147544 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 70, 89

Conread position: 1-165
Cow position: chr8:2814665-2814501 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 119, 74

Conread position: 1-165
Cow position: chr8:3339123-3338964 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 61

Conread position: 1-165
Cow position: chr8:5979984-5979820 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr8:6073775-6073936 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 31

Conread position: 1-165
Cow position: chr8:6484890-6485054 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 62, 72

Conread position: 1-165
Cow position: chr8:10263124-10263284 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 1-165
Cow position: chr8:10456508-10456344 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr8:16031538-16031695 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 1-165
Cow position: chr8:16653456-16653299 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 1-165
Cow position: chr8:19717059-19717216 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 1-165
Cow position: chr8:20684013-20683848 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 58

Conread position: 1-165
Cow position: chr8:23018471-23018628 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 24

Conread position: 1-165
Cow position: chr8:24201959-24201785 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-165
Cow position: chr8:24371673-24371837 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 144

Conread position: 1-165
Cow position: chr8:24867701-24867863 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 65

Conread position: 1-165
Cow position: chr8:28313681-28313843 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 1-165
Cow position: chr8:29030045-29030220 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 1-165
Cow position: chr8:29624928-29625083 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 1-165
Cow position: chr8:31297307-31297146 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 1-165
Cow position: chr8:32093917-32093757 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 112, 55

Conread position: 1-165
Cow position: chr8:33406806-33406965 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 109

Conread position: 1-165
Cow position: chr8:35210886-35211044 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 56

Conread position: 1-165
Cow position: chr8:35971891-35971729 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 56

Conread position: 1-165
Cow position: chr8:35991091-35990929 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 36

Conread position: 1-165
Cow position: chr8:37192405-37192248 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr8:37391319-37391478 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 27

Conread position: 1-165
Cow position: chr8:37635953-37636111 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr8:38572225-38572395 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 1-165
Cow position: chr8:38894053-38893888 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 122

Conread position: 1-165
Cow position: chr8:39807640-39807473 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 106

Conread position: 1-165
Cow position: chr8:42762390-42762552 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 1-165
Cow position: chr8:45447055-45447223 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 1-165
Cow position: chr8:46235739-46235582 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 1-165
Cow position: chr8:54052349-54052188 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 1-165
Cow position: chr8:55716796-55716639 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 125

Conread position: 1-165
Cow position: chr8:55885014-55884850 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 86

Conread position: 1-165
Cow position: chr8:58876110-58875942 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 1-165
Cow position: chr8:59250770-59250611 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 59

Conread position: 1-166
Cow position: chr8:2787000-2786838 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 23

Conread position: 1-166
Cow position: chr8:6531454-6531294 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 56

Conread position: 1-166
Cow position: chr8:57389327-57389165 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 2-163
Cow position: chr8:3015521-3015354 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 2-164
Cow position: chr8:608058-608210 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 3-157
Cow position: chr8:6224395-6224548 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 0

Conread position: 3-161
Cow position: chr8:1303947-1303788 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 51, 68

Conread position: 3-165
Cow position: chr8:4924607-4924447 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 3-165
Cow position: chr8:29765299-29765135 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 26

Conread position: 3-165
Cow position: chr8:32620944-32621113 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 3-165
Cow position: chr8:33974598-33974439 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 3-165
Cow position: chr8:45287253-45287404 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 4-162
Cow position: chr8:55926238-55926084 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 19

Conread position: 4-164
Cow position: chr8:18207098-18207254 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 4-165
Cow position: chr8:23179503-23179665 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 4-165
Cow position: chr8:25349750-25349591 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 4-165
Cow position: chr8:35580597-35580757 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 58

Conread position: 5-152
Cow position: chr8:17199395-17199540 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 12, 24

Conread position: 5-165
Cow position: chr8:32133306-32133151 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 7-163
Cow position: chr8:39721704-39721546 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 8-165
Cow position: chr8:17669703-17669860 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 8-165
Cow position: chr8:39174209-39174367 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 11-180
Cow position: chr8:2897585-2897758 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 156, 0

Conread position: 14-163
Cow position: chr8:554157-554305 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 14-165
Cow position: chr8:4648858-4649009 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-165
Cow position: chr8:58058771-58058620 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 14-181
Cow position: chr8:40280715-40280547 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 51

Conread position: 17-165
Cow position: chr8:46616435-46616292 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 18-156
Cow position: chr8:4205949-4205812 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 19-163
Cow position: chr8:54303047-54302909 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 19-168
Cow position: chr8:38681904-38681758 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 82

Conread position: 21-165
Cow position: chr8:6675169-6675026 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 23-165
Cow position: chr8:17103402-17103541 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 28-165
Cow position: chr8:34478134-34477998 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 31, 0

Conread position: 38-163
Cow position: chr8:40032806-40032932 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 42-161
Cow position: chr8:18057754-18057634 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 17

Conread position: 57-165
Cow position: chr8:57045510-57045616 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 70-165
Cow position: chr8:36055427-36055521 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 83
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.