Cow genome map

Conread name: Ss1.1-Pig3-SRG8028K16.5

Conread position: 1-141
Cow position: chr9:41486244-41486104 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 72

Conread position: 1-157
Cow position: chr9:45285536-45285377 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 63, 120

Conread position: 1-159
Cow position: chr9:44832056-44831900 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 75, 64

Conread position: 1-161
Cow position: chr9:12910402-12910245 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 1-161
Cow position: chr9:33119889-33119729 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-161
Cow position: chr9:43757540-43757694 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 1-162
Cow position: chr9:31079083-31078925 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 1-162
Cow position: chr9:52267759-52267599 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 56

Conread position: 1-163
Cow position: chr9:20847928-20848090 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 1-163
Cow position: chr9:23388680-23388519 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 1-164
Cow position: chr9:4267983-4267824 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 1-165
Cow position: chr9:767152-766992 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 47

Conread position: 1-165
Cow position: chr9:3738225-3738061 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 82

Conread position: 1-165
Cow position: chr9:5263497-5263661 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 58

Conread position: 1-165
Cow position: chr9:7634270-7634434 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr9:9403175-9403015 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-165
Cow position: chr9:13205573-13205407 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 113

Conread position: 1-165
Cow position: chr9:20091045-20091202 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 72

Conread position: 1-165
Cow position: chr9:23431148-23430985 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 55, 107

Conread position: 1-165
Cow position: chr9:24887205-24887360 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr9:34286798-34286961 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 144

Conread position: 1-165
Cow position: chr9:34689600-34689441 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 71, 111

Conread position: 1-165
Cow position: chr9:36490900-36490731 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 1-165
Cow position: chr9:38343886-38344051 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 1-165
Cow position: chr9:38793015-38793174 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 143, 61

Conread position: 1-165
Cow position: chr9:41728257-41728417 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 133
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 82

Conread position: 1-165
Cow position: chr9:44921394-44921230 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-165
Cow position: chr9:46316784-46316625 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr9:48628027-48628188 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 1-165
Cow position: chr9:49293144-49292985 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 1-165
Cow position: chr9:55256553-55256390 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 48, 63

Conread position: 1-166
Cow position: chr9:61302999-61303165 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 1-171
Cow position: chr9:26344969-26344803 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 136
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 41, 0

Conread position: 1-181
Cow position: chr9:29006556-29006742 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 2-163
Cow position: chr9:45141600-45141444 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 2-165
Cow position: chr9:10144478-10144315 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 17

Conread position: 2-165
Cow position: chr9:22361010-22361172 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 73, 57

Conread position: 2-165
Cow position: chr9:30195214-30195370 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 3-138
Cow position: chr9:8636668-8636803 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 68

Conread position: 3-149
Cow position: chr9:6596235-6596090 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 3-162
Cow position: chr9:34958055-34957897 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 109

Conread position: 3-165
Cow position: chr9:9654310-9654151 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 3-165
Cow position: chr9:17872109-17871943 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 3-165
Cow position: chr9:19555374-19555535 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 160, 84

Conread position: 3-165
Cow position: chr9:52578537-52578376 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 4-164
Cow position: chr9:13169661-13169504 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 4-164
Cow position: chr9:28747518-28747364 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 5-165
Cow position: chr9:5763630-5763473 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 5-165
Cow position: chr9:64091683-64091845 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 5-171
Cow position: chr9:5219167-5219003 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 11-164
Cow position: chr9:1712467-1712317 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 14-165
Cow position: chr9:28773133-28773282 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 15-165
Cow position: chr9:42509129-42509275 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 16-164
Cow position: chr9:20811051-20810905 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 17-163
Cow position: chr9:34666433-34666577 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 8, 42

Conread position: 19-165
Cow position: chr9:11299673-11299530 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 21-165
Cow position: chr9:30123938-30124081 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 25-165
Cow position: chr9:8562857-8562998 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 27-165
Cow position: chr9:5500878-5501018 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 29-165
Cow position: chr9:4928653-4928788 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 32-165
Cow position: chr9:41652816-41652946 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 32-165
Cow position: chr9:60037680-60037814 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 27

Conread position: 38-165
Cow position: chr9:1952234-1952108 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 48-165
Cow position: chr9:32829964-32829848 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 63

Show alignments to all cow chromosomes.