Cow genome map

Conread name: Ss1.1-Pig4-TMW8002L02.5

Conread position: 13-502
Cow position: chr11:17452948-17453452 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 322
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 15

Conread position: 19-406
Cow position: chr11:61132066-61131655 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 284
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 76, 5

Conread position: 21-501
Cow position: chr11:19507214-19507723 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 80

Conread position: 27-376
Cow position: chr11:3230219-3230589 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 23

Conread position: 28-508
Cow position: chr11:31836079-31836583 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 192

Conread position: 28-508
Cow position: chr11:82346229-82345753 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 323
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 103, 16

Conread position: 36-287
Cow position: chr11:67599483-67599736 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 97, 14

Conread position: 36-508
Cow position: chr11:84774069-84774562 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 15

Conread position: 39-508
Cow position: chr11:42794032-42793537 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 22

Conread position: 40-404
Cow position: chr11:66944283-66943923 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 221, 40

Conread position: 40-507
Cow position: chr11:75511283-75510803 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 41-285
Cow position: chr11:67849064-67848809 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 105

Conread position: 48-216
Cow position: chr11:13062492-13062316 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 171

Conread position: 48-405
Cow position: chr11:33688129-33687767 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 70, 156

Conread position: 48-494
Cow position: chr11:47758073-47757595 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 172

Conread position: 48-502
Cow position: chr11:63507426-63507894 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 35

Conread position: 48-504
Cow position: chr11:85390935-85390467 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 53

Conread position: 48-508
Cow position: chr11:57754303-57753823 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 320
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 49, 58

Conread position: 49-277
Cow position: chr11:48982210-48982444 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 31

Conread position: 49-278
Cow position: chr11:9153982-9153751 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 52, 151

Conread position: 49-281
Cow position: chr11:21372165-21371922 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 48, 170

Conread position: 49-283
Cow position: chr11:56652323-56652081 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 34

Conread position: 49-283
Cow position: chr11:58804906-58804661 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 84, 158

Conread position: 49-285
Cow position: chr11:260234-259981 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 195
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 73, 177

Conread position: 49-285
Cow position: chr11:11256983-11257210 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 187
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 221, 86

Conread position: 49-285
Cow position: chr11:21853335-21853088 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 48, 57

Conread position: 49-285
Cow position: chr11:22933707-22933464 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 60, 48

Conread position: 49-285
Cow position: chr11:74928719-74928959 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 87, 122

Conread position: 49-287
Cow position: chr11:17998017-17997769 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 158

Conread position: 49-287
Cow position: chr11:83284809-83285046 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 34

Conread position: 49-309
Cow position: chr11:15995410-15995686 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 104, 171

Conread position: 49-309
Cow position: chr11:56227845-56228116 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 110, 170

Conread position: 49-331
Cow position: chr11:33733662-33733367 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 48

Conread position: 49-383
Cow position: chr11:7229276-7229635 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 48, 159

Conread position: 49-395
Cow position: chr11:21729104-21728732 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 136

Conread position: 49-399
Cow position: chr11:59004643-59004288 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 40

Conread position: 49-407
Cow position: chr11:21896779-21896405 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 40, 67

Conread position: 49-407
Cow position: chr11:32077867-32077484 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 48

Conread position: 49-407
Cow position: chr11:34297404-34297778 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 262
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 42

Conread position: 49-407
Cow position: chr11:67348197-67347827 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 154

Conread position: 49-407
Cow position: chr11:74990536-74990920 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 48

Conread position: 49-423
Cow position: chr11:417557-417158 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 275
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 104, 160

Conread position: 49-423
Cow position: chr11:19061158-19060758 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 159

Conread position: 49-423
Cow position: chr11:77034176-77033777 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 272
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 48, 56

Conread position: 49-425
Cow position: chr11:18067887-18067506 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 122

Conread position: 49-426
Cow position: chr11:48169708-48169329 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 254
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 72

Conread position: 49-429
Cow position: chr11:67746329-67746729 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 119

Conread position: 49-439
Cow position: chr11:35262880-35262469 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 265
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 39

Conread position: 49-445
Cow position: chr11:43917350-43917771 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 54

Conread position: 49-445
Cow position: chr11:57625274-57624850 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 48, 159

Conread position: 49-459
Cow position: chr11:48168157-48167735 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 285
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 62, 48

Conread position: 49-460
Cow position: chr11:43511059-43510623 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-460
Cow position: chr11:63167597-63167168 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 35

Conread position: 49-460
Cow position: chr11:77748982-77749397 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 270
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 59

Conread position: 49-462
Cow position: chr11:38235853-38235417 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 145

Conread position: 49-463
Cow position: chr11:4206090-4206540 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 158

Conread position: 49-463
Cow position: chr11:32762368-32762806 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 159

Conread position: 49-463
Cow position: chr11:80789475-80789033 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 172

Conread position: 49-468
Cow position: chr11:45651997-45651557 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 294
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 211, 148

Conread position: 49-469
Cow position: chr11:56891777-56892194 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 49

Conread position: 49-469
Cow position: chr11:80591279-80591718 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 71

Conread position: 49-472
Cow position: chr11:76566380-76566820 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 305
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 48, 57

Conread position: 49-472
Cow position: chr11:77436447-77436874 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 39

Conread position: 49-475
Cow position: chr11:12111843-12112297 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 57

Conread position: 49-475
Cow position: chr11:30057123-30057566 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 56

Conread position: 49-475
Cow position: chr11:31892858-31893293 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 296
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 47, 57

Conread position: 49-475
Cow position: chr11:62787587-62788025 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 290
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 90, 33

Conread position: 49-482
Cow position: chr11:75354120-75354579 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 161

Conread position: 49-483
Cow position: chr11:41093946-41093491 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-484
Cow position: chr11:1492932-1492497 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 288
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 48, 84

Conread position: 49-485
Cow position: chr11:3796151-3796588 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 64

Conread position: 49-486
Cow position: chr11:27724985-27724523 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 59

Conread position: 49-487
Cow position: chr11:30194401-30194847 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 290
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 56

Conread position: 49-487
Cow position: chr11:41101833-41102283 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 295
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 48, 57

Conread position: 49-493
Cow position: chr11:49411638-49411191 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 34

Conread position: 49-498
Cow position: chr11:12009995-12010459 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 316
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 39, 25

Conread position: 49-498
Cow position: chr11:17782111-17781654 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 137

Conread position: 49-500
Cow position: chr11:16229731-16229262 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 351

Conread position: 49-502
Cow position: chr11:1626238-1625772 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 71

Conread position: 49-502
Cow position: chr11:10698830-10698352 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-502
Cow position: chr11:18146630-18146174 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 322
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 113, 48

Conread position: 49-502
Cow position: chr11:53307979-53307511 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 304
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 33, 10

Conread position: 49-502
Cow position: chr11:67453571-67454047 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-503
Cow position: chr11:2835180-2835656 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 63

Conread position: 49-503
Cow position: chr11:4024433-4023963 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 49-503
Cow position: chr11:11990913-11991394 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-504
Cow position: chr11:3238217-3238698 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-504
Cow position: chr11:20731306-20730827 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-504
Cow position: chr11:26482488-26482968 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 332
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 48, 20

Conread position: 49-504
Cow position: chr11:26550392-26550872 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 31

Conread position: 49-504
Cow position: chr11:34638588-34638108 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 159

Conread position: 49-504
Cow position: chr11:35542152-35541681 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 158

Conread position: 49-504
Cow position: chr11:38599798-38599318 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-504
Cow position: chr11:44154162-44153687 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 151

Conread position: 49-504
Cow position: chr11:62791811-62792287 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 58

Conread position: 49-504
Cow position: chr11:63860727-63860248 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 75

Conread position: 49-504
Cow position: chr11:72368969-72369447 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 321
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 21, 160

Conread position: 49-504
Cow position: chr11:73137508-73137974 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 57

Conread position: 49-505
Cow position: chr11:67744303-67744778 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 31

Conread position: 49-506
Cow position: chr11:4267239-4266757 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 48

Conread position: 49-506
Cow position: chr11:48428060-48428537 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 23

Conread position: 49-507
Cow position: chr11:5222594-5222121 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 306
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 24

Conread position: 49-507
Cow position: chr11:18920670-18920200 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 97

Conread position: 49-507
Cow position: chr11:21471543-21472022 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 91

Conread position: 49-507
Cow position: chr11:41106476-41105995 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 318
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 156

Conread position: 49-507
Cow position: chr11:68130328-68130785 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 161

Conread position: 49-507
Cow position: chr11:83000945-83001427 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:1505080-1504595 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 330
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 52, 171

Conread position: 49-508
Cow position: chr11:2285629-2286113 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:4734199-4734683 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 49-508
Cow position: chr11:5584520-5584044 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 322
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 96, 53

Conread position: 49-508
Cow position: chr11:7151916-7152396 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 49-508
Cow position: chr11:7680879-7681355 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 36

Conread position: 49-508
Cow position: chr11:7719599-7719110 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 170

Conread position: 49-508
Cow position: chr11:8366476-8366960 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 49-508
Cow position: chr11:9432302-9432774 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 49-508
Cow position: chr11:10365480-10364985 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 159

Conread position: 49-508
Cow position: chr11:10871909-10871425 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 159

Conread position: 49-508
Cow position: chr11:11315913-11315429 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:11591893-11592381 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 161

Conread position: 49-508
Cow position: chr11:12178004-12178488 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:12353976-12353492 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:13087751-13087267 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:15047375-15047857 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr11:15495304-15495788 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:15835828-15836313 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 49-508
Cow position: chr11:16548034-16547550 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:17104774-17104306 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 34

Conread position: 49-508
Cow position: chr11:17279676-17279197 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 48

Conread position: 49-508
Cow position: chr11:17549074-17549558 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:17854010-17854494 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:19099569-19099088 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:20285702-20285218 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 171

Conread position: 49-508
Cow position: chr11:22618030-22617546 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 49-508
Cow position: chr11:23494668-23495152 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 222

Conread position: 49-508
Cow position: chr11:23904198-23904678 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 158

Conread position: 49-508
Cow position: chr11:24334077-24333593 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:24600906-24601404 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 49-508
Cow position: chr11:25336055-25336533 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 49-508
Cow position: chr11:25759669-25760144 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 65

Conread position: 49-508
Cow position: chr11:26592861-26592378 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 155

Conread position: 49-508
Cow position: chr11:27938526-27938992 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 49-508
Cow position: chr11:28125431-28125913 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 166

Conread position: 49-508
Cow position: chr11:28226862-28226378 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:30087792-30088276 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:30700410-30700882 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:30776879-30777363 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr11:30929298-30929782 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr11:31834345-31833861 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 159

Conread position: 49-508
Cow position: chr11:32454970-32455454 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr11:33601724-33601239 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:35142416-35141936 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:38505315-38504831 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:39151513-39151989 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 73

Conread position: 49-508
Cow position: chr11:41261012-41260529 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr11:41314212-41314695 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 49-508
Cow position: chr11:43361803-43361339 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 158

Conread position: 49-508
Cow position: chr11:44893958-44893479 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 49-508
Cow position: chr11:45155831-45155346 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 324
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:47972936-47972468 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 335
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:49935832-49935349 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 49-508
Cow position: chr11:51034192-51034676 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:54302453-54302937 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr11:56463278-56463761 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:58136633-58137111 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:58399248-58399719 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 159

Conread position: 49-508
Cow position: chr11:59871731-59872205 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 56

Conread position: 49-508
Cow position: chr11:61397705-61397221 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:62009885-62009401 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 159

Conread position: 49-508
Cow position: chr11:62575069-62574601 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 316
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 120, 163

Conread position: 49-508
Cow position: chr11:63390563-63390082 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 49-508
Cow position: chr11:65760690-65760207 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 131

Conread position: 49-508
Cow position: chr11:66390091-66389615 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:67296091-67295609 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:67920422-67919942 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr11:69403305-69402823 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 169

Conread position: 49-508
Cow position: chr11:71332417-71332899 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 172

Conread position: 49-508
Cow position: chr11:73513456-73512971 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 170

Conread position: 49-508
Cow position: chr11:73798782-73798306 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 323
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 50, 15

Conread position: 49-508
Cow position: chr11:75256106-75256590 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr11:75711337-75710853 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 49-508
Cow position: chr11:77746291-77745811 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 159

Conread position: 49-516
Cow position: chr11:2567767-2567291 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 330
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 208

Conread position: 50-393
Cow position: chr11:12077489-12077137 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 22

Conread position: 50-475
Cow position: chr11:2951174-2950742 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 286
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 40

Conread position: 50-504
Cow position: chr11:6343377-6343855 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 50-504
Cow position: chr11:44870443-44870915 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 150

Conread position: 50-504
Cow position: chr11:84967025-84967504 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 47

Conread position: 50-508
Cow position: chr11:8444071-8443591 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 50-508
Cow position: chr11:12763272-12762798 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 162

Conread position: 50-508
Cow position: chr11:41599771-41599293 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 163

Conread position: 51-240
Cow position: chr11:30190672-30190861 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 98, 151

Conread position: 51-260
Cow position: chr11:25808829-25808615 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 46

Conread position: 51-263
Cow position: chr11:42517257-42517477 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 21

Conread position: 51-452
Cow position: chr11:35738424-35738000 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 291
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 100, 46

Conread position: 51-476
Cow position: chr11:4053420-4052993 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 51-504
Cow position: chr11:14469434-14469897 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 44

Conread position: 51-504
Cow position: chr11:52846393-52846871 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 46

Conread position: 51-508
Cow position: chr11:8246110-8246584 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 16

Conread position: 51-508
Cow position: chr11:10851032-10851514 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 61

Conread position: 51-508
Cow position: chr11:27660149-27660637 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 68

Conread position: 51-508
Cow position: chr11:30164490-30164950 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 318
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 173

Conread position: 51-508
Cow position: chr11:33000798-33001272 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 16

Conread position: 51-508
Cow position: chr11:38574567-38574085 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 157

Conread position: 51-508
Cow position: chr11:42358120-42358581 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 90

Conread position: 51-508
Cow position: chr11:46412552-46413044 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 72

Conread position: 52-430
Cow position: chr11:7330501-7330874 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 239
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 237, 28

Conread position: 52-443
Cow position: chr11:7322834-7323248 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 287
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 89, 40

Conread position: 52-495
Cow position: chr11:1667543-1668004 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 28

Conread position: 52-496
Cow position: chr11:50135975-50135534 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 98

Conread position: 52-507
Cow position: chr11:44254992-44255470 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 174

Conread position: 52-508
Cow position: chr11:2294141-2293660 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 117

Conread position: 53-362
Cow position: chr11:7376941-7377270 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 110, 143

Conread position: 53-504
Cow position: chr11:7327466-7327941 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 318
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 60, 11

Conread position: 54-498
Cow position: chr11:7386337-7386792 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 47

Conread position: 55-328
Cow position: chr11:38638403-38638109 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 91, 160

Conread position: 57-508
Cow position: chr11:17037590-17037134 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 72

Conread position: 58-285
Cow position: chr11:40487078-40487316 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 95, 147

Conread position: 58-357
Cow position: chr11:8844106-8844426 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 14

Conread position: 58-445
Cow position: chr11:8829847-8829456 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 39

Conread position: 58-472
Cow position: chr11:49237042-49236611 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 294
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 48, 39

Conread position: 58-483
Cow position: chr11:74389124-74389570 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 37, 150

Conread position: 58-508
Cow position: chr11:26534761-26535221 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 147

Conread position: 65-195
Cow position: chr11:67954194-67954057 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 65-507
Cow position: chr11:44233359-44233808 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 22

Conread position: 67-508
Cow position: chr11:41725750-41726180 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 280
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 181, 30

Conread position: 74-508
Cow position: chr11:52298222-52297762 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 146

Conread position: 76-504
Cow position: chr11:2308856-2309316 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 395

Conread position: 78-437
Cow position: chr11:53280454-53280070 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 27

Conread position: 103-508
Cow position: chr11:73466230-73465814 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 75, 47

Conread position: 104-508
Cow position: chr11:36765487-36765890 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 81

Conread position: 105-463
Cow position: chr11:79945522-79945160 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 230
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 164, 49

Conread position: 107-423
Cow position: chr11:4060970-4060638 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 63, 7

Conread position: 118-508
Cow position: chr11:10303150-10302754 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 82

Conread position: 123-500
Cow position: chr11:52515505-52515907 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 280
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 19, 89

Conread position: 123-508
Cow position: chr11:3999501-3999119 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 114, 31

Conread position: 123-508
Cow position: chr11:38097740-38097341 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 124-451
Cow position: chr11:8551802-8552137 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 29, 78

Conread position: 125-300
Cow position: chr11:64904085-64904266 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 76

Conread position: 125-496
Cow position: chr11:74848602-74848967 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 56, 16

Conread position: 126-423
Cow position: chr11:37727098-37727403 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 112, 72

Conread position: 126-499
Cow position: chr11:73328088-73328471 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 257
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 115, 40

Conread position: 127-404
Cow position: chr11:29013202-29013488 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 75

Conread position: 127-409
Cow position: chr11:7307053-7307331 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 83

Conread position: 127-461
Cow position: chr11:15249834-15249494 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 218
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 14

Conread position: 127-496
Cow position: chr11:7704700-7705059 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 103, 14

Conread position: 127-496
Cow position: chr11:15279803-15279436 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 262
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 111, 71

Conread position: 127-508
Cow position: chr11:40402767-40402383 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 82

Conread position: 127-508
Cow position: chr11:77194767-77194370 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 19

Conread position: 129-407
Cow position: chr11:38832477-38832180 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 17, 73

Conread position: 129-508
Cow position: chr11:44580231-44579834 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 72

Conread position: 131-355
Cow position: chr11:19271026-19270795 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 135, 67

Conread position: 131-440
Cow position: chr11:9079327-9079006 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 14, 68

Conread position: 131-457
Cow position: chr11:53855543-53855876 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 239
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 13, 67

Conread position: 131-475
Cow position: chr11:40351054-40350699 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 80

Conread position: 131-475
Cow position: chr11:49037406-49037050 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 84

Conread position: 131-475
Cow position: chr11:76767425-76767777 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 68

Conread position: 131-502
Cow position: chr11:61485806-61485431 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 10

Conread position: 131-504
Cow position: chr11:28381679-28382056 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 33

Conread position: 131-505
Cow position: chr11:42380444-42380816 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 32

Conread position: 131-507
Cow position: chr11:26467313-26467699 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 67

Conread position: 131-507
Cow position: chr11:48485067-48484679 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 68

Conread position: 131-508
Cow position: chr11:12895771-12896151 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 66

Conread position: 131-508
Cow position: chr11:27667043-27666680 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 252
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 13, 68

Conread position: 132-404
Cow position: chr11:48411535-48411824 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 129, 0

Conread position: 132-407
Cow position: chr11:70030428-70030718 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 87, 66

Conread position: 132-414
Cow position: chr11:76370831-76370535 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 128, 78

Conread position: 132-418
Cow position: chr11:63478862-63479160 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 13

Conread position: 132-461
Cow position: chr11:31929445-31929790 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 21, 71

Conread position: 132-469
Cow position: chr11:35241860-35241522 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 66

Conread position: 132-475
Cow position: chr11:27833745-27833387 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 253
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 139, 9

Conread position: 132-483
Cow position: chr11:77236872-77237219 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 79

Conread position: 132-502
Cow position: chr11:9388346-9388728 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 131, 86

Conread position: 132-502
Cow position: chr11:28394079-28394458 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 275
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 78

Conread position: 132-502
Cow position: chr11:38640959-38641331 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 63

Conread position: 132-504
Cow position: chr11:23883356-23883727 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 129, 66

Conread position: 132-506
Cow position: chr11:49171483-49171106 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 15

Conread position: 132-507
Cow position: chr11:48658739-48659129 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 132-508
Cow position: chr11:14259952-14259565 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 63

Conread position: 132-508
Cow position: chr11:14650227-14649841 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 78

Conread position: 132-508
Cow position: chr11:25564761-25565147 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 62

Conread position: 132-508
Cow position: chr11:31236394-31236005 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 22

Conread position: 132-508
Cow position: chr11:31865647-31866049 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 129, 65

Conread position: 132-508
Cow position: chr11:37069242-37068844 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 132-508
Cow position: chr11:40458185-40458573 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 130, 78

Conread position: 132-508
Cow position: chr11:44915672-44915287 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 268
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 134, 78

Conread position: 132-508
Cow position: chr11:46142977-46142589 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 78

Conread position: 132-508
Cow position: chr11:46781060-46780670 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 132-508
Cow position: chr11:51477645-51478025 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 66

Conread position: 132-508
Cow position: chr11:53772690-53773066 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 13

Conread position: 132-508
Cow position: chr11:56916714-56916323 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 42

Conread position: 132-508
Cow position: chr11:64844080-64844455 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 67

Conread position: 132-508
Cow position: chr11:70602274-70601884 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 78

Conread position: 132-508
Cow position: chr11:71078430-71078822 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 69

Conread position: 132-508
Cow position: chr11:81576671-81576287 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 63

Conread position: 133-508
Cow position: chr11:64478162-64477778 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 243
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 35

Conread position: 135-508
Cow position: chr11:40139558-40139176 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 60

Conread position: 137-386
Cow position: chr11:81067751-81068008 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 87

Conread position: 137-404
Cow position: chr11:84809354-84809082 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 182
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 10

Conread position: 137-431
Cow position: chr11:26121906-26121600 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 124, 61

Conread position: 137-443
Cow position: chr11:15653499-15653814 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 123, 30

Conread position: 137-445
Cow position: chr11:26561306-26560985 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 30, 0

Conread position: 137-451
Cow position: chr11:27074295-27073967 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 121, 61

Conread position: 137-463
Cow position: chr11:33189585-33189926 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-475
Cow position: chr11:11857722-11858076 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 241
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 123, 61

Conread position: 137-484
Cow position: chr11:9222643-9222311 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 120, 52

Conread position: 137-497
Cow position: chr11:49551001-49550639 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 127, 26

Conread position: 137-503
Cow position: chr11:9295841-9295467 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 259
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 29

Conread position: 137-504
Cow position: chr11:21820386-21820009 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 61

Conread position: 137-505
Cow position: chr11:37345957-37346322 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 127, 73

Conread position: 137-508
Cow position: chr11:2801245-2800860 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-508
Cow position: chr11:4596581-4596967 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 61

Conread position: 137-508
Cow position: chr11:10100062-10100448 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 61

Conread position: 137-508
Cow position: chr11:24397384-24396998 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-508
Cow position: chr11:28692950-28692583 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 14

Conread position: 137-508
Cow position: chr11:30255451-30255838 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 62

Conread position: 137-508
Cow position: chr11:33687458-33687088 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 62

Conread position: 137-508
Cow position: chr11:36930520-36930135 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 61

Conread position: 137-508
Cow position: chr11:44106696-44107077 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 73

Conread position: 137-508
Cow position: chr11:47573522-47573136 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-508
Cow position: chr11:50282396-50282006 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-508
Cow position: chr11:54303917-54304303 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-508
Cow position: chr11:63261193-63260812 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 61

Conread position: 137-508
Cow position: chr11:67388228-67388597 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 132, 61

Conread position: 137-508
Cow position: chr11:70424405-70424790 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 37

Conread position: 137-508
Cow position: chr11:75402496-75402128 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 61

Conread position: 138-357
Cow position: chr11:58049912-58049683 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 60

Conread position: 138-504
Cow position: chr11:32956800-32956440 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 72

Conread position: 138-504
Cow position: chr11:32977986-32977630 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 333, 72

Conread position: 138-508
Cow position: chr11:65410084-65409692 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 278
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 31, 61

Conread position: 140-508
Cow position: chr11:13224235-13224615 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 60

Conread position: 143-278
Cow position: chr11:35361802-35361936 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 67

Conread position: 143-499
Cow position: chr11:37304209-37304575 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 61

Conread position: 143-504
Cow position: chr11:65282030-65282405 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 55

Conread position: 143-508
Cow position: chr11:4032457-4032086 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 67

Conread position: 143-508
Cow position: chr11:5273554-5273175 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 55

Conread position: 143-508
Cow position: chr11:29663034-29662661 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 55

Conread position: 143-508
Cow position: chr11:41167674-41167294 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 55

Conread position: 143-508
Cow position: chr11:66664399-66664020 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 55

Conread position: 143-513
Cow position: chr11:59369015-59368631 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 232
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 119, 73

Conread position: 144-445
Cow position: chr11:61846923-61846614 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 119, 69

Conread position: 144-475
Cow position: chr11:44621756-44622099 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 123, 17

Conread position: 145-398
Cow position: chr11:81388007-81388271 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 65

Conread position: 145-493
Cow position: chr11:67166603-67166250 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 54

Conread position: 145-508
Cow position: chr11:5482424-5482046 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 53

Conread position: 146-508
Cow position: chr11:77253376-77253003 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 21, 55

Conread position: 148-508
Cow position: chr11:79995723-79995355 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 7

Conread position: 155-406
Cow position: chr11:29949305-29949040 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 87, 55

Conread position: 157-508
Cow position: chr11:28597852-28597516 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 128, 11

Conread position: 158-422
Cow position: chr11:45632923-45632642 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 52

Conread position: 158-457
Cow position: chr11:31802684-31802370 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 109, 52

Conread position: 158-508
Cow position: chr11:44937908-44938270 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 104, 54

Conread position: 159-443
Cow position: chr11:10760493-10760213 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 112, 39

Conread position: 159-502
Cow position: chr11:54361032-54361386 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 101, 38

Conread position: 163-508
Cow position: chr11:37159596-37159953 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 45

Conread position: 163-508
Cow position: chr11:52127949-52127590 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 35

Conread position: 163-508
Cow position: chr11:58139734-58140090 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 163-508
Cow position: chr11:75196104-75195744 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 35

Conread position: 167-508
Cow position: chr11:43645013-43644659 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 43

Conread position: 167-508
Cow position: chr11:65670386-65670742 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 7

Conread position: 167-508
Cow position: chr11:70978348-70977992 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 169-508
Cow position: chr11:10043290-10043644 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 41

Conread position: 170-472
Cow position: chr11:58816643-58816959 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 93, 40

Conread position: 170-508
Cow position: chr11:40133749-40133400 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 24

Conread position: 170-519
Cow position: chr11:4246487-4246851 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 28

Conread position: 171-451
Cow position: chr11:21920416-21920127 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 204
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 98, 27

Conread position: 172-469
Cow position: chr11:50192076-50191794 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 238, 26

Conread position: 172-508
Cow position: chr11:15372769-15373088 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 173-501
Cow position: chr11:42372855-42373186 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 90, 25

Conread position: 174-508
Cow position: chr11:71271981-71271638 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 177-508
Cow position: chr11:44356833-44356488 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 33

Conread position: 178-405
Cow position: chr11:32068202-32067958 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 83, 32

Conread position: 179-461
Cow position: chr11:48648812-48649107 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 88, 31

Conread position: 179-507
Cow position: chr11:44488056-44488399 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 31

Conread position: 182-407
Cow position: chr11:40820089-40819854 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 159

Conread position: 182-508
Cow position: chr11:1268446-1268105 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 16

Conread position: 182-508
Cow position: chr11:34842093-34841748 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 183-475
Cow position: chr11:59800849-59801151 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 15

Conread position: 184-472
Cow position: chr11:21155606-21155308 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 78, 14

Conread position: 184-508
Cow position: chr11:9649983-9649660 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 214
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 14

Conread position: 184-508
Cow position: chr11:45280904-45280572 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 14

Conread position: 184-508
Cow position: chr11:66945524-66945196 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 238
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 14

Conread position: 184-508
Cow position: chr11:72313652-72313991 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 26

Conread position: 185-508
Cow position: chr11:41178012-41178350 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 25

Conread position: 186-502
Cow position: chr11:7325241-7325570 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 181

Conread position: 186-508
Cow position: chr11:41024882-41025216 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 12

Conread position: 187-508
Cow position: chr11:4625686-4625369 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 11

Conread position: 188-508
Cow position: chr11:25524910-25525245 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 78, 10

Conread position: 189-414
Cow position: chr11:44644392-44644155 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 72, 21

Conread position: 189-472
Cow position: chr11:82145655-82145374 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 9

Conread position: 190-507
Cow position: chr11:18389763-18389422 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 38, 20

Conread position: 191-472
Cow position: chr11:8234188-8233899 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 69, 19

Conread position: 196-423
Cow position: chr11:22997654-22997890 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 54, 17

Conread position: 197-451
Cow position: chr11:46680274-46680539 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 53, 13

Conread position: 198-447
Cow position: chr11:20493693-20493436 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 68, 12

Conread position: 199-407
Cow position: chr11:7926212-7926008 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 11

Conread position: 199-499
Cow position: chr11:52854872-52855183 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 70, 61

Conread position: 200-490
Cow position: chr11:42230451-42230742 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 89, 21

Conread position: 202-464
Cow position: chr11:11996897-11996629 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 60, 35

Conread position: 203-508
Cow position: chr11:20601388-20601713 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 261

Conread position: 204-462
Cow position: chr11:55487001-55487258 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 65, 35

Conread position: 206-506
Cow position: chr11:69565396-69565694 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 60, 11

Conread position: 210-451
Cow position: chr11:62827669-62827424 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 232

Conread position: 210-501
Cow position: chr11:2350604-2350912 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 217
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 57, 0

Conread position: 210-502
Cow position: chr11:40327107-40326821 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 196
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 112

Conread position: 210-508
Cow position: chr11:2421552-2421867 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 227
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 56, 0

Conread position: 210-508
Cow position: chr11:36167673-36167358 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 210-508
Cow position: chr11:57595006-57594691 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 210-508
Cow position: chr11:72050063-72050380 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 56, 0

Conread position: 218-508
Cow position: chr11:23994900-23995195 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 48, 267

Conread position: 220-508
Cow position: chr11:3394068-3393759 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 226
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 42, 0

Conread position: 221-502
Cow position: chr11:37433317-37433620 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 41, 175

Conread position: 221-507
Cow position: chr11:83322768-83323051 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 40, 157

Conread position: 223-507
Cow position: chr11:7321213-7321509 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 205
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 217

Conread position: 224-508
Cow position: chr11:67951796-67951498 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 40, 21

Conread position: 225-508
Cow position: chr11:49099553-49099248 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 0

Conread position: 227-508
Cow position: chr11:65429938-65430245 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 224
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 0

Conread position: 228-507
Cow position: chr11:84796785-84796497 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 34, 145

Conread position: 230-508
Cow position: chr11:7144130-7143850 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 72

Conread position: 233-449
Cow position: chr11:3083658-3083430 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 31, 191

Conread position: 233-451
Cow position: chr11:6084897-6084678 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 18, 11

Conread position: 238-508
Cow position: chr11:31884701-31884963 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 153

Conread position: 261-480
Cow position: chr11:50198550-50198322 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 263-491
Cow position: chr11:56652069-56651846 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 82, 16

Conread position: 268-432
Cow position: chr11:21540107-21539943 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 29, 22

Conread position: 269-508
Cow position: chr11:87154744-87154501 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 32

Conread position: 271-425
Cow position: chr11:6734020-6733865 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 0

Conread position: 271-508
Cow position: chr11:22102979-22103213 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 160, 0

Conread position: 272-422
Cow position: chr11:16592728-16592879 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 272-508
Cow position: chr11:59459118-59459358 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 55

Conread position: 273-497
Cow position: chr11:67863103-67862875 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 121

Conread position: 274-504
Cow position: chr11:17832031-17831790 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 166, 0

Conread position: 274-507
Cow position: chr11:46690904-46691137 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 42, 24

Conread position: 274-508
Cow position: chr11:64904271-64904498 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 25, 0

Conread position: 274-508
Cow position: chr11:67599747-67599983 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 30, 136

Conread position: 275-472
Cow position: chr11:67848794-67848596 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 16, 39

Conread position: 277-508
Cow position: chr11:12316892-12316662 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 0

Conread position: 277-508
Cow position: chr11:75558827-75558594 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 8, 24

Conread position: 278-508
Cow position: chr11:61426876-61427102 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 30, 151

Conread position: 279-513
Cow position: chr11:59601764-59601998 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 280-462
Cow position: chr11:75360661-75360480 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 280-504
Cow position: chr11:41577785-41577559 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 17, 10

Conread position: 281-393
Cow position: chr11:26067929-26067817 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 281-443
Cow position: chr11:54508976-54509137 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 281-501
Cow position: chr11:74928981-74929199 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 144, 0

Conread position: 281-539
Cow position: chr11:35252764-35252505 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 226

Conread position: 282-460
Cow position: chr11:40230781-40230603 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 22, 169

Conread position: 282-461
Cow position: chr11:30190972-30191145 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 282-475
Cow position: chr11:18814057-18814245 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 99, 146

Conread position: 282-485
Cow position: chr11:19238945-19238745 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 150, 0

Conread position: 282-490
Cow position: chr11:70016467-70016666 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 282-492
Cow position: chr11:79741399-79741183 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 282-508
Cow position: chr11:259961-259732 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 23, 0

Conread position: 282-508
Cow position: chr11:41033076-41033298 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 106

Conread position: 282-508
Cow position: chr11:56752153-56751929 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 22, 33

Conread position: 283-423
Cow position: chr11:15995683-15995828 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 283-443
Cow position: chr11:4193770-4193928 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 284-406
Cow position: chr11:41223526-41223648 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 284-423
Cow position: chr11:84628699-84628563 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 284-428
Cow position: chr11:43526888-43526744 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 284-460
Cow position: chr11:17862997-17862824 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 148, 0

Conread position: 284-460
Cow position: chr11:34023088-34023263 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 284-462
Cow position: chr11:42366734-42366913 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 113

Conread position: 284-472
Cow position: chr11:62873541-62873353 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 284-485
Cow position: chr11:37509736-37509936 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 190, 0

Conread position: 284-498
Cow position: chr11:74564634-74564424 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 284-499
Cow position: chr11:52463677-52463894 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 7, 0

Conread position: 284-502
Cow position: chr11:40300591-40300376 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 202, 0

Conread position: 284-507
Cow position: chr11:16795914-16795697 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 284-507
Cow position: chr11:38578572-38578353 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 169, 0

Conread position: 284-508
Cow position: chr11:2345768-2345544 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:5766370-5766146 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:7120773-7120550 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 284-508
Cow position: chr11:17078141-17078365 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:17890489-17890272 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 39, 0

Conread position: 284-508
Cow position: chr11:20428438-20428662 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:27923008-27923236 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 284-508
Cow position: chr11:35240300-35240520 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 29

Conread position: 284-508
Cow position: chr11:38819322-38819098 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:41261344-41261568 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:55014770-55014554 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 284-508
Cow position: chr11:61431561-61431337 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:63652470-63652249 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 147, 0

Conread position: 284-508
Cow position: chr11:64053149-64052925 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr11:66858806-66858587 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 0

Conread position: 285-452
Cow position: chr11:75206209-75206379 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 14

Conread position: 285-475
Cow position: chr11:38793791-38793980 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 285-485
Cow position: chr11:56228134-56228330 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 156
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 111, 167

Conread position: 285-485
Cow position: chr11:80827148-80826945 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 91, 0

Conread position: 285-504
Cow position: chr11:21853067-21852848 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 285-508
Cow position: chr11:16757921-16757697 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 285-508
Cow position: chr11:42682366-42682140 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 29, 69

Conread position: 285-508
Cow position: chr11:78819339-78819554 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 176
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 286-504
Cow position: chr11:861601-861818 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 68, 0

Conread position: 287-462
Cow position: chr11:55080666-55080845 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 287-475
Cow position: chr11:15125724-15125537 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 125, 0

Conread position: 287-502
Cow position: chr11:64033963-64034166 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 106, 23

Conread position: 287-508
Cow position: chr11:10876444-10876666 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 63

Conread position: 287-508
Cow position: chr11:13061980-13061763 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 287-508
Cow position: chr11:62238715-62238936 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 18, 64

Conread position: 287-508
Cow position: chr11:78991031-78990812 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 26, 0

Conread position: 288-437
Cow position: chr11:30790608-30790455 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 93, 59

Conread position: 288-475
Cow position: chr11:80002268-80002452 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 92, 38

Conread position: 288-508
Cow position: chr11:44031233-44031450 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 58, 0

Conread position: 291-436
Cow position: chr11:84723361-84723505 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 291-502
Cow position: chr11:50950154-50950362 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 55, 0

Conread position: 291-508
Cow position: chr11:19113099-19112884 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 293-451
Cow position: chr11:50916968-50916811 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 0

Conread position: 293-506
Cow position: chr11:26146090-26145880 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 46

Conread position: 294-423
Cow position: chr11:35361976-35362105 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-463
Cow position: chr11:48980141-48979972 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 294-495
Cow position: chr11:18116540-18116741 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 115, 19

Conread position: 294-504
Cow position: chr11:30110200-30110404 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 294-505
Cow position: chr11:1473703-1473492 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 294-507
Cow position: chr11:29614536-29614745 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 294-508
Cow position: chr11:2772524-2772737 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 201, 0

Conread position: 294-508
Cow position: chr11:10874958-10875171 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 171, 58

Conread position: 294-508
Cow position: chr11:15988483-15988696 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 150, 0

Conread position: 294-508
Cow position: chr11:17980647-17980861 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:18328481-18328267 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:23773444-23773654 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 294-508
Cow position: chr11:29999847-30000061 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:41162000-41162214 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:44043418-44043624 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 125, 0

Conread position: 294-508
Cow position: chr11:48108942-48109156 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:48884886-48885100 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:52450863-52450649 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:57760037-57760251 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:60778098-60777884 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 294-508
Cow position: chr11:71957693-71957479 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 295-508
Cow position: chr11:2069797-2070007 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 65, 10

Conread position: 295-508
Cow position: chr11:2534876-2535089 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 295-508
Cow position: chr11:15695576-15695363 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 8, 17

Conread position: 295-508
Cow position: chr11:56826788-56827001 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 295-508
Cow position: chr11:58380732-58380944 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 130, 0

Conread position: 296-463
Cow position: chr11:48419065-48418899 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 296-508
Cow position: chr11:26253985-26254197 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 297-508
Cow position: chr11:31310400-31310185 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 298-507
Cow position: chr11:18372267-18372059 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 299-500
Cow position: chr11:25808492-25808291 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 299-502
Cow position: chr11:80520017-80520219 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 175, 0

Conread position: 299-504
Cow position: chr11:13043682-13043478 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 56, 0

Conread position: 299-508
Cow position: chr11:27935002-27934794 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 120, 0

Conread position: 299-508
Cow position: chr11:42848724-42848516 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 299-508
Cow position: chr11:44914694-44914484 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 117, 22

Conread position: 300-496
Cow position: chr11:62880315-62880511 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 58, 13

Conread position: 300-500
Cow position: chr11:38811077-38810879 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 300-501
Cow position: chr11:7319765-7319965 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 49

Conread position: 300-501
Cow position: chr11:51028608-51028808 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 155
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 50, 0

Conread position: 301-508
Cow position: chr11:60825020-60825226 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 0

Conread position: 303-460
Cow position: chr11:62750195-62750351 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 304-508
Cow position: chr11:54878097-54877894 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 170, 0

Conread position: 304-508
Cow position: chr11:84183980-84184181 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 306-508
Cow position: chr11:10949223-10949021 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 308-507
Cow position: chr11:378621-378422 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 313-475
Cow position: chr11:35920527-35920366 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 130, 0

Conread position: 313-502
Cow position: chr11:8020554-8020743 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 313-504
Cow position: chr11:26399715-26399529 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 152, 15

Conread position: 313-508
Cow position: chr11:13040007-13039800 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 313-508
Cow position: chr11:18587489-18587296 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 313-508
Cow position: chr11:38219963-38220159 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 313-508
Cow position: chr11:47124529-47124723 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 313-508
Cow position: chr11:61876022-61876217 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 314-430
Cow position: chr11:8413066-8413182 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 315-508
Cow position: chr11:34962235-34962424 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 109, 57

Conread position: 316-496
Cow position: chr11:42231859-42232035 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 128, 34

Conread position: 316-508
Cow position: chr11:8713526-8713718 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 155, 94

Conread position: 320-451
Cow position: chr11:38638399-38638531 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 320-508
Cow position: chr11:59942602-59942789 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 322-501
Cow position: chr11:11534844-11534666 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 325-508
Cow position: chr11:27943830-27944013 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 326-507
Cow position: chr11:52424346-52424527 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 328-501
Cow position: chr11:47595586-47595759 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 328-506
Cow position: chr11:67246083-67246259 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 105

Conread position: 332-508
Cow position: chr11:19997509-19997333 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 338-504
Cow position: chr11:5229800-5229634 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 338-504
Cow position: chr11:42292552-42292386 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 338-508
Cow position: chr11:5657325-5657155 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 338-508
Cow position: chr11:10810791-10810621 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 338-508
Cow position: chr11:36230148-36229981 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 338-508
Cow position: chr11:45647553-45647386 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 139
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 149, 0

Conread position: 338-508
Cow position: chr11:87147987-87147817 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 339-508
Cow position: chr11:47846221-47846390 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 339-508
Cow position: chr11:57624795-57624626 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 340-508
Cow position: chr11:10214268-10214108 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 341-508
Cow position: chr11:58049415-58049248 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 342-504
Cow position: chr11:47676459-47676621 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 128

Conread position: 347-504
Cow position: chr11:37753088-37752931 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 347-508
Cow position: chr11:86721239-86721080 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 69

Conread position: 349-508
Cow position: chr11:28619861-28620020 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 350-485
Cow position: chr11:79868847-79868981 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 0

Conread position: 350-494
Cow position: chr11:21620663-21620807 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 350-502
Cow position: chr11:34409779-34409928 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 350-515
Cow position: chr11:48271506-48271668 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 160, 53

Conread position: 351-502
Cow position: chr11:9153014-9152863 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 352-508
Cow position: chr11:9654250-9654095 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 352-508
Cow position: chr11:10622140-10621991 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 352-508
Cow position: chr11:37278894-37278735 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 352-508
Cow position: chr11:77767313-77767157 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 15, 90

Conread position: 354-508
Cow position: chr11:13015577-13015427 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 126, 0

Conread position: 354-508
Cow position: chr11:23138774-23138622 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 355-504
Cow position: chr11:39587193-39587343 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 131, 119

Conread position: 355-504
Cow position: chr11:60515666-60515518 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 355-508
Cow position: chr11:14426360-14426207 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 356-508
Cow position: chr11:22593160-22593308 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 357-500
Cow position: chr11:6153718-6153861 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 76

Conread position: 362-497
Cow position: chr11:456836-456702 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 362-507
Cow position: chr11:26328173-26328025 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 362-508
Cow position: chr11:21631412-21631558 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 362-508
Cow position: chr11:30200115-30199969 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 362-508
Cow position: chr11:49632160-49632015 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 362-508
Cow position: chr11:53150766-53150620 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 363-506
Cow position: chr11:77705075-77705217 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 363-508
Cow position: chr11:14683468-14683608 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 363-508
Cow position: chr11:38648889-38649034 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 375-504
Cow position: chr11:40375634-40375505 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 375-508
Cow position: chr11:5710153-5710289 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 375-508
Cow position: chr11:20760835-20760967 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 375-508
Cow position: chr11:33147179-33147046 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 375-508
Cow position: chr11:68136460-68136593 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 376-486
Cow position: chr11:37285370-37285260 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 376-507
Cow position: chr11:72291062-72291192 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 377-507
Cow position: chr11:2057050-2057179 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 378-508
Cow position: chr11:19787470-19787600 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 380-508
Cow position: chr11:61891278-61891406 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 381-500
Cow position: chr11:35881102-35881221 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 383-508
Cow position: chr11:27386991-27386866 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 384-508
Cow position: chr11:8212103-8212227 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.