Cow genome map

Conread name: Ss1.1-Pig4-TMW8002L02.5

Conread position: 17-508
Cow position: chr27:344762-344249 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 34

Conread position: 36-508
Cow position: chr27:4665431-4664963 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 299
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 61, 20

Conread position: 43-507
Cow position: chr27:4824016-4824479 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 66

Conread position: 48-436
Cow position: chr27:31249441-31249826 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 268
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 153

Conread position: 48-463
Cow position: chr27:4804987-4805418 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 174

Conread position: 48-508
Cow position: chr27:25784555-25784080 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 155

Conread position: 49-195
Cow position: chr27:28051584-28051429 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 95, 17

Conread position: 49-254
Cow position: chr27:25971401-25971187 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 52, 168

Conread position: 49-267
Cow position: chr27:15375014-15375230 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 212, 120

Conread position: 49-281
Cow position: chr27:24239914-24239687 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 211, 102

Conread position: 49-283
Cow position: chr27:14380504-14380748 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 165

Conread position: 49-284
Cow position: chr27:4828700-4828940 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 184
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 93, 49

Conread position: 49-285
Cow position: chr27:21392212-21392457 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 95, 21

Conread position: 49-285
Cow position: chr27:23317742-23317505 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 51

Conread position: 49-285
Cow position: chr27:25799457-25799705 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 15

Conread position: 49-287
Cow position: chr27:22647432-22647183 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 159

Conread position: 49-332
Cow position: chr27:1536370-1536678 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 34

Conread position: 49-361
Cow position: chr27:20764948-20765270 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 76, 148

Conread position: 49-391
Cow position: chr27:9970371-9970738 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 46, 160

Conread position: 49-395
Cow position: chr27:3990600-3990230 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 159

Conread position: 49-407
Cow position: chr27:8592581-8592956 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 209

Conread position: 49-413
Cow position: chr27:27930408-27930790 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 267
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 51, 113

Conread position: 49-429
Cow position: chr27:15405828-15406224 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 15

Conread position: 49-445
Cow position: chr27:27501409-27501807 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 272
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 217, 24

Conread position: 49-460
Cow position: chr27:4982572-4982996 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-461
Cow position: chr27:26654240-26653834 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 277
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 214, 24

Conread position: 49-468
Cow position: chr27:15867095-15866657 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 301
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 47

Conread position: 49-493
Cow position: chr27:30783104-30783584 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 334
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 27

Conread position: 49-496
Cow position: chr27:6524078-6523611 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 17

Conread position: 49-500
Cow position: chr27:21350048-21350521 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 72

Conread position: 49-500
Cow position: chr27:30036069-30036555 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 52

Conread position: 49-500
Cow position: chr27:30307069-30306590 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 159

Conread position: 49-501
Cow position: chr27:3729360-3729814 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 303
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 25

Conread position: 49-501
Cow position: chr27:4818615-4819078 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 329
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 99, 146

Conread position: 49-502
Cow position: chr27:24054908-24055361 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 34

Conread position: 49-504
Cow position: chr27:1188866-1189322 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 314
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 50

Conread position: 49-504
Cow position: chr27:1520880-1521359 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-504
Cow position: chr27:10579147-10579623 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 49-504
Cow position: chr27:14297407-14297885 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-506
Cow position: chr27:13353506-13353987 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 49-508
Cow position: chr27:165719-165237 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 159

Conread position: 49-508
Cow position: chr27:1140898-1141381 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 49-508
Cow position: chr27:2001045-2001528 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr27:2331703-2332184 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr27:2557791-2557310 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 73

Conread position: 49-508
Cow position: chr27:3232334-3231854 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 158

Conread position: 49-508
Cow position: chr27:3653500-3653016 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr27:4331540-4331055 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 163

Conread position: 49-508
Cow position: chr27:8201138-8201620 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 156

Conread position: 49-508
Cow position: chr27:8959816-8959333 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr27:9332877-9333351 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 59

Conread position: 49-508
Cow position: chr27:11434375-11434846 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 166

Conread position: 49-508
Cow position: chr27:12006348-12006832 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 171

Conread position: 49-508
Cow position: chr27:12277310-12277790 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 159

Conread position: 49-508
Cow position: chr27:13183072-13182605 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 26

Conread position: 49-508
Cow position: chr27:13901324-13901807 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr27:15272868-15272393 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 49-508
Cow position: chr27:15348862-15349319 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 126

Conread position: 49-508
Cow position: chr27:16031197-16030714 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr27:19523508-19523026 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 159

Conread position: 49-508
Cow position: chr27:19932366-19931874 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 49-508
Cow position: chr27:22797457-22796975 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 157

Conread position: 49-508
Cow position: chr27:25801005-25800527 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 34

Conread position: 49-508
Cow position: chr27:26330132-26330611 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 159

Conread position: 49-508
Cow position: chr27:27291589-27292077 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 163

Conread position: 49-508
Cow position: chr27:29036180-29035698 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 157

Conread position: 50-285
Cow position: chr27:4811438-4811668 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 73

Conread position: 50-285
Cow position: chr27:16788095-16787851 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 8

Conread position: 50-438
Cow position: chr27:27557005-27557411 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 96, 22

Conread position: 50-497
Cow position: chr27:25885026-25885472 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 298
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 51, 166

Conread position: 50-508
Cow position: chr27:5268563-5269030 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 320
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 58, 37

Conread position: 50-508
Cow position: chr27:15872120-15871648 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 63

Conread position: 50-508
Cow position: chr27:20810622-20811100 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 153

Conread position: 51-508
Cow position: chr27:25112364-25112849 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 46

Conread position: 51-508
Cow position: chr27:26645053-26644570 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 46

Conread position: 52-508
Cow position: chr27:21284032-21283568 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 311
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 210, 60

Conread position: 52-508
Cow position: chr27:26856260-26856724 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 31

Conread position: 53-508
Cow position: chr27:10306322-10306786 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 156

Conread position: 56-484
Cow position: chr27:22329708-22330151 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 56

Conread position: 62-508
Cow position: chr27:1501727-1502177 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 152

Conread position: 70-328
Cow position: chr27:14669411-14669679 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 83, 137

Conread position: 76-504
Cow position: chr27:9089872-9090309 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 99

Conread position: 81-485
Cow position: chr27:19388960-19388529 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 16

Conread position: 105-388
Cow position: chr27:1124375-1124088 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 105

Conread position: 115-335
Cow position: chr27:4834412-4834647 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 27, 61

Conread position: 123-496
Cow position: chr27:27234854-27234479 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 48, 59

Conread position: 124-508
Cow position: chr27:10670324-10670718 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 264
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 135, 49

Conread position: 127-508
Cow position: chr27:16427944-16428337 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 268
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 33, 64

Conread position: 129-508
Cow position: chr27:10383727-10384114 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 50, 66

Conread position: 130-508
Cow position: chr27:16581868-16581493 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 153, 68

Conread position: 131-450
Cow position: chr27:8586775-8587108 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 36

Conread position: 131-451
Cow position: chr27:3994036-3993712 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 86

Conread position: 131-502
Cow position: chr27:9262986-9262600 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 270
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 13, 64

Conread position: 131-508
Cow position: chr27:18559643-18559250 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 258
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 37

Conread position: 132-399
Cow position: chr27:27193052-27192769 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 48, 27

Conread position: 132-405
Cow position: chr27:12239361-12239648 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 131, 66

Conread position: 132-419
Cow position: chr27:13316852-13317151 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 130, 78

Conread position: 132-484
Cow position: chr27:8427151-8427518 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 248
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 93, 0

Conread position: 132-485
Cow position: chr27:11489916-11490281 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 67

Conread position: 132-507
Cow position: chr27:8972737-8973128 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 278
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 131, 78

Conread position: 132-507
Cow position: chr27:26785110-26785494 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 65

Conread position: 132-508
Cow position: chr27:526228-526594 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 132-508
Cow position: chr27:1081869-1081493 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 46

Conread position: 132-508
Cow position: chr27:11481224-11481615 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 132-508
Cow position: chr27:15033598-15033208 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 66

Conread position: 132-508
Cow position: chr27:28984062-28984450 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 80

Conread position: 132-508
Cow position: chr27:29811596-29811985 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 25

Conread position: 135-485
Cow position: chr27:12281988-12282346 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 10

Conread position: 135-502
Cow position: chr27:31547244-31546871 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 42, 31

Conread position: 137-407
Cow position: chr27:14859625-14859906 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 132, 60

Conread position: 137-425
Cow position: chr27:1904313-1904013 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 7, 250

Conread position: 137-451
Cow position: chr27:27054198-27053863 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 125, 61

Conread position: 137-463
Cow position: chr27:25677115-25676788 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 121, 71

Conread position: 137-500
Cow position: chr27:9254846-9254468 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 257
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 8, 25

Conread position: 137-502
Cow position: chr27:16332181-16331812 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 73

Conread position: 137-508
Cow position: chr27:791748-791362 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 75

Conread position: 137-508
Cow position: chr27:3649779-3650165 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 137-508
Cow position: chr27:15099940-15100323 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 61

Conread position: 137-508
Cow position: chr27:17476909-17476539 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 73

Conread position: 137-508
Cow position: chr27:19300268-19299882 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 61

Conread position: 138-496
Cow position: chr27:11256387-11256014 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 72

Conread position: 139-451
Cow position: chr27:3751519-3751833 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 225
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 19, 57

Conread position: 141-504
Cow position: chr27:24260503-24260156 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 135, 69

Conread position: 141-508
Cow position: chr27:5423521-5423896 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 26

Conread position: 143-366
Cow position: chr27:816459-816221 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 183
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 118, 67

Conread position: 143-496
Cow position: chr27:2936130-2936499 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 109, 55

Conread position: 143-504
Cow position: chr27:8262142-8262519 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 56

Conread position: 145-506
Cow position: chr27:10324620-10324253 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 53

Conread position: 146-502
Cow position: chr27:5990739-5990374 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 257
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 27, 53

Conread position: 146-508
Cow position: chr27:13422857-13422480 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 64

Conread position: 149-508
Cow position: chr27:1031241-1030870 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 117, 8

Conread position: 158-490
Cow position: chr27:28924205-28924545 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 158-508
Cow position: chr27:6018878-6019238 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 39

Conread position: 159-436
Cow position: chr27:12555215-12554934 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 185
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 104, 51

Conread position: 162-496
Cow position: chr27:30696880-30697220 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 93, 20

Conread position: 163-427
Cow position: chr27:30583578-30583308 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 179

Conread position: 163-507
Cow position: chr27:24295936-24295577 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 167-466
Cow position: chr27:723683-723997 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 196
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 100, 43

Conread position: 167-508
Cow position: chr27:12750864-12751213 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 31

Conread position: 168-508
Cow position: chr27:28907900-28907551 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 170-449
Cow position: chr27:17422936-17423236 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 285

Conread position: 173-504
Cow position: chr27:13409329-13409676 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 26

Conread position: 174-485
Cow position: chr27:10283467-10283793 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 88, 24

Conread position: 179-508
Cow position: chr27:13272907-13273236 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 20

Conread position: 182-508
Cow position: chr27:30476904-30476565 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 28

Conread position: 190-484
Cow position: chr27:15814060-15813768 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 193
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 9

Conread position: 199-476
Cow position: chr27:12173299-12173588 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 70, 61

Conread position: 199-508
Cow position: chr27:23454338-23454656 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 63, 21

Conread position: 210-503
Cow position: chr27:8187205-8187511 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 51, 0

Conread position: 210-504
Cow position: chr27:8202631-8202321 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 57, 290

Conread position: 210-508
Cow position: chr27:9989510-9989197 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 154

Conread position: 210-508
Cow position: chr27:16045098-16045414 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 0

Conread position: 210-508
Cow position: chr27:20001447-20001132 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 223-508
Cow position: chr27:26849318-26849020 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 102

Conread position: 225-407
Cow position: chr27:11414164-11413973 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 131

Conread position: 225-508
Cow position: chr27:30177130-30176829 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 37, 0

Conread position: 228-508
Cow position: chr27:16264093-16263802 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 204
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 44, 21

Conread position: 268-508
Cow position: chr27:1636224-1636464 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 13, 47

Conread position: 268-508
Cow position: chr27:13198626-13198387 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 13

Conread position: 272-508
Cow position: chr27:11469979-11470214 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 13, 54

Conread position: 274-460
Cow position: chr27:21986614-21986433 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 26

Conread position: 274-500
Cow position: chr27:14380883-14381110 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 274-503
Cow position: chr27:23074672-23074444 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 107, 5

Conread position: 274-508
Cow position: chr27:16823511-16823292 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 276-508
Cow position: chr27:1293698-1293931 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 9, 0

Conread position: 277-507
Cow position: chr27:5914390-5914617 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 62, 22

Conread position: 277-508
Cow position: chr27:11954547-11954777 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 277-508
Cow position: chr27:15178931-15178700 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 32, 8

Conread position: 277-527
Cow position: chr27:23730843-23731076 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 278-502
Cow position: chr27:15363731-15363948 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 17

Conread position: 280-508
Cow position: chr27:14669659-14669893 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 15, 82

Conread position: 280-508
Cow position: chr27:31268670-31268896 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 182, 208

Conread position: 281-500
Cow position: chr27:26551927-26551711 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 149, 17

Conread position: 281-508
Cow position: chr27:4828964-4829190 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 34, 18

Conread position: 282-423
Cow position: chr27:23992556-23992697 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 282-469
Cow position: chr27:25472276-25472090 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 282-500
Cow position: chr27:22400490-22400273 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 114

Conread position: 282-508
Cow position: chr27:537170-536944 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 282-508
Cow position: chr27:20827986-20828216 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 283-508
Cow position: chr27:29374447-29374222 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 284-407
Cow position: chr27:27017278-27017399 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 284-421
Cow position: chr27:24570979-24570843 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 284-436
Cow position: chr27:11672934-11672782 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 284-451
Cow position: chr27:23233449-23233619 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 284-482
Cow position: chr27:28145765-28145957 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 0

Conread position: 284-508
Cow position: chr27:523480-523705 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 144, 0

Conread position: 284-508
Cow position: chr27:724004-724228 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr27:1145186-1145414 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 145

Conread position: 284-508
Cow position: chr27:8743636-8743419 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 81, 0

Conread position: 284-508
Cow position: chr27:10321522-10321742 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 0

Conread position: 284-508
Cow position: chr27:11651556-11651780 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr27:12147352-12147576 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr27:12190734-12190958 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr27:12549820-12549596 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 284-508
Cow position: chr27:16551170-16550948 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 15, 41

Conread position: 284-508
Cow position: chr27:27527499-27527720 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 285-504
Cow position: chr27:30777257-30777041 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 0

Conread position: 285-508
Cow position: chr27:8291309-8291529 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 168

Conread position: 285-508
Cow position: chr27:19487524-19487300 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 285-508
Cow position: chr27:26034058-26033842 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 287-479
Cow position: chr27:6074837-6074643 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 17, 0

Conread position: 287-508
Cow position: chr27:8429718-8429934 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 288-508
Cow position: chr27:21451911-21452128 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 289-474
Cow position: chr27:30447900-30447704 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 289-508
Cow position: chr27:5853211-5853430 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 8, 130

Conread position: 289-508
Cow position: chr27:26598583-26598362 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 8, 66

Conread position: 290-414
Cow position: chr27:7084802-7084678 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 290-508
Cow position: chr27:3235201-3235415 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 176, 18

Conread position: 290-508
Cow position: chr27:16076242-16076026 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 103, 0

Conread position: 290-508
Cow position: chr27:16337733-16337523 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 46, 0

Conread position: 290-510
Cow position: chr27:21609145-21609357 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 197, 40

Conread position: 291-485
Cow position: chr27:8941990-8942185 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 291-507
Cow position: chr27:18740850-18741061 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 24, 111

Conread position: 292-451
Cow position: chr27:5106648-5106808 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 294-399
Cow position: chr27:16984925-16984820 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 294-502
Cow position: chr27:28081601-28081805 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 106, 177

Conread position: 294-508
Cow position: chr27:4768791-4769004 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 44, 0

Conread position: 294-508
Cow position: chr27:21203583-21203374 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 48, 140

Conread position: 294-508
Cow position: chr27:29446635-29446421 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 295-449
Cow position: chr27:18970202-18970356 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 295-502
Cow position: chr27:17923380-17923586 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 18

Conread position: 295-507
Cow position: chr27:1354295-1354085 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 136, 0

Conread position: 296-500
Cow position: chr27:13695803-13696012 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 175

Conread position: 297-435
Cow position: chr27:23864117-23863978 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 298-501
Cow position: chr27:30446920-30446720 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 298-508
Cow position: chr27:1481367-1481577 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 126, 136

Conread position: 298-508
Cow position: chr27:16787526-16787322 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 299-502
Cow position: chr27:16260286-16260481 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 299-508
Cow position: chr27:26545230-26545439 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 304-508
Cow position: chr27:11095329-11095125 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 305-508
Cow position: chr27:23893815-23894018 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 313-413
Cow position: chr27:8569062-8569162 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 313-464
Cow position: chr27:10274802-10274954 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 126, 0

Conread position: 313-507
Cow position: chr27:4509265-4509070 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 168, 0

Conread position: 313-508
Cow position: chr27:3340437-3340242 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 313-508
Cow position: chr27:15312880-15312685 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 313-508
Cow position: chr27:25971188-25970993 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 315-463
Cow position: chr27:21247084-21246935 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 317-500
Cow position: chr27:27683356-27683539 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 318-456
Cow position: chr27:11813717-11813854 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 319-508
Cow position: chr27:1884898-1884709 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 324-508
Cow position: chr27:5836321-5836505 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 325-508
Cow position: chr27:11606385-11606202 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 338-508
Cow position: chr27:15316152-15315975 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 339-500
Cow position: chr27:27063801-27063961 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 339-508
Cow position: chr27:28008411-28008580 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 341-508
Cow position: chr27:12006164-12005997 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 344-502
Cow position: chr27:4719251-4719408 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 43, 0

Conread position: 345-508
Cow position: chr27:707604-707439 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 16, 35

Conread position: 347-508
Cow position: chr27:12098239-12098079 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 350-507
Cow position: chr27:15868021-15867869 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 350-508
Cow position: chr27:4389563-4389723 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 121, 75

Conread position: 351-508
Cow position: chr27:17462487-17462643 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 136

Conread position: 352-508
Cow position: chr27:22559718-22559565 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 357-502
Cow position: chr27:19326156-19326011 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 362-507
Cow position: chr27:29492931-29493074 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 111, 0

Conread position: 362-508
Cow position: chr27:5861838-5861692 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 362-508
Cow position: chr27:17403529-17403383 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 363-507
Cow position: chr27:815996-815853 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 364-508
Cow position: chr27:20135375-20135519 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 366-508
Cow position: chr27:20549063-20549203 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 367-504
Cow position: chr27:30418288-30418150 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 0

Conread position: 369-502
Cow position: chr27:21407926-21408058 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 374-501
Cow position: chr27:7958218-7958346 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 375-508
Cow position: chr27:1654650-1654783 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 375-508
Cow position: chr27:23079637-23079770 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 375-508
Cow position: chr27:30921770-30921638 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 376-508
Cow position: chr27:17396836-17396967 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 382-508
Cow position: chr27:4882221-4882095 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 384-508
Cow position: chr27:24999126-24999250 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 397-508
Cow position: chr27:12239718-12239829 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 399-509
Cow position: chr27:28276845-28276736 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 103, 0

Show alignments to all cow chromosomes.