Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003A13.5 |
| Conread position: | 493-744 |
| Cow position: | chr11:11558394-11558147 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 509-756 |
| Cow position: | chr11:11125879-11125628 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 517-690 |
| Cow position: | chr11:81340338-81340511 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 517-718 |
| Cow position: | chr11:47725091-47724900 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 520-753 |
| Cow position: | chr11:83043165-83043395 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 89 |
| Conread position: | 521-710 |
| Cow position: | chr11:49057583-49057402 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 25, 83 |
| Conread position: | 522-749 |
| Cow position: | chr11:3896499-3896727 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 111 |
| Conread position: | 523-732 |
| Cow position: | chr11:46884572-46884361 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 523-742 |
| Cow position: | chr11:52297023-52297243 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 23, 89 |
| Conread position: | 523-744 |
| Cow position: | chr11:46922692-46922910 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 124, 24 |
| Conread position: | 524-723 |
| Cow position: | chr11:42206614-42206418 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 524-749 |
| Cow position: | chr11:29960487-29960270 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 525-686 |
| Cow position: | chr11:70821243-70821078 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 525-705 |
| Cow position: | chr11:15591283-15591460 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 525-706 |
| Cow position: | chr11:25721810-25721981 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 525-707 |
| Cow position: | chr11:74839798-74839623 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 525-708 |
| Cow position: | chr11:68570187-68570369 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 525-712 |
| Cow position: | chr11:7874335-7874146 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 98, 131 |
| Conread position: | 525-715 |
| Cow position: | chr11:30192371-30192183 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 80, 22 |
| Conread position: | 525-727 |
| Cow position: | chr11:49210621-49210829 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 525-729 |
| Cow position: | chr11:9699054-9699254 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 525-734 |
| Cow position: | chr11:19591800-19592009 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 525-742 |
| Cow position: | chr11:62239937-62239722 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 525-744 |
| Cow position: | chr11:20238872-20238652 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 525-746 |
| Cow position: | chr11:47784975-47784748 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 77, 139 |
| Conread position: | 525-749 |
| Cow position: | chr11:48296221-48296005 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 525-753 |
| Cow position: | chr11:69978161-69977938 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 20, 47 |
| Conread position: | 525-758 |
| Cow position: | chr11:66188126-66188355 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 525-761 |
| Cow position: | chr11:40608398-40608634 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 88, 79 |
| Conread position: | 526-676 |
| Cow position: | chr11:63977251-63977101 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 526-707 |
| Cow position: | chr11:37042168-37041984 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 526-708 |
| Cow position: | chr11:4411679-4411857 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 526-718 |
| Cow position: | chr11:80007867-80008066 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 20, 112 |
| Conread position: | 526-725 |
| Cow position: | chr11:66685714-66685911 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 13, 91 |
| Conread position: | 526-744 |
| Cow position: | chr11:30494182-30493972 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 526-744 |
| Cow position: | chr11:80556413-80556198 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 20, 98 |
| Conread position: | 526-745 |
| Cow position: | chr11:27747113-27746898 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 526-759 |
| Cow position: | chr11:30172498-30172270 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 527-739 |
| Cow position: | chr11:31228149-31227943 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 527-742 |
| Cow position: | chr11:35153627-35153846 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 66, 52 |
| Conread position: | 527-749 |
| Cow position: | chr11:27248681-27248465 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 527-749 |
| Cow position: | chr11:62789321-62789102 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 527-763 |
| Cow position: | chr11:71492669-71492903 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 34 |
| Conread position: | 527-770 |
| Cow position: | chr11:77241895-77241656 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 235, 99 |
| Conread position: | 527-781 |
| Cow position: | chr11:4225281-4225036 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 227, 100 |
| Conread position: | 528-729 |
| Cow position: | chr11:1625028-1625233 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 528-729 |
| Cow position: | chr11:40395628-40395430 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 87 |
| Conread position: | 528-740 |
| Cow position: | chr11:15017252-15017036 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 528-744 |
| Cow position: | chr11:3175860-3175649 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 528-744 |
| Cow position: | chr11:35212978-35213192 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 528-744 |
| Cow position: | chr11:67614732-67614946 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 528-745 |
| Cow position: | chr11:15339248-15339038 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 528-749 |
| Cow position: | chr11:34646789-34646561 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 226 |
| Conread position: | 528-759 |
| Cow position: | chr11:17227458-17227681 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 529-689 |
| Cow position: | chr11:65431709-65431549 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 529-718 |
| Cow position: | chr11:49149241-49149050 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 529-728 |
| Cow position: | chr11:22884597-22884405 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 529-744 |
| Cow position: | chr11:2907343-2907547 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 529-749 |
| Cow position: | chr11:897857-897645 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 46 |
| Conread position: | 530-749 |
| Cow position: | chr11:258983-259200 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 33, 100 |
| Conread position: | 530-749 |
| Cow position: | chr11:41293612-41293846 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 16, 232 |
| Conread position: | 530-767 |
| Cow position: | chr11:71022189-71021956 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 36, 19 |
| Conread position: | 531-714 |
| Cow position: | chr11:40818441-40818621 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 531-723 |
| Cow position: | chr11:2484605-2484798 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 531-742 |
| Cow position: | chr11:22977693-22977896 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 531-742 |
| Cow position: | chr11:49872698-49872907 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 87, 168 |
| Conread position: | 531-749 |
| Cow position: | chr11:21886020-21885805 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 531-761 |
| Cow position: | chr11:15382306-15382543 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 223 |
| Conread position: | 533-749 |
| Cow position: | chr11:4636985-4637200 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 535-739 |
| Cow position: | chr11:17676190-17676392 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 535-744 |
| Cow position: | chr11:11469471-11469672 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 536-711 |
| Cow position: | chr11:80296675-80296844 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 107, 35 |
| Conread position: | 536-724 |
| Cow position: | chr11:18924931-18924741 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 85, 128 |
| Conread position: | 536-729 |
| Cow position: | chr11:48315217-48315406 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 536-729 |
| Cow position: | chr11:65762400-65762600 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 16 |
| Conread position: | 536-742 |
| Cow position: | chr11:74316891-74316687 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 536-743 |
| Cow position: | chr11:63165465-63165670 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 536-744 |
| Cow position: | chr11:2917410-2917610 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 536-744 |
| Cow position: | chr11:67615069-67615270 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 536-749 |
| Cow position: | chr11:80639369-80639578 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 96, 13 |
| Conread position: | 536-755 |
| Cow position: | chr11:83032862-83032646 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 536-756 |
| Cow position: | chr11:44223067-44222854 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 537-739 |
| Cow position: | chr11:56115121-56114919 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 69 |
| Conread position: | 537-744 |
| Cow position: | chr11:1932304-1932516 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 537-749 |
| Cow position: | chr11:8437504-8437722 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 537-749 |
| Cow position: | chr11:30842842-30843047 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 537-749 |
| Cow position: | chr11:35580445-35580231 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 537-763 |
| Cow position: | chr11:6233694-6233923 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 9, 212 |
| Conread position: | 539-724 |
| Cow position: | chr11:6255828-6256007 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 543-744 |
| Cow position: | chr11:26274789-26274981 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 544-705 |
| Cow position: | chr11:54872585-54872745 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 83 |
| Conread position: | 544-729 |
| Cow position: | chr11:45435251-45435070 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 177, 33 |
| Conread position: | 544-729 |
| Cow position: | chr11:62812776-62812959 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 544-744 |
| Cow position: | chr11:45872134-45872335 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 544-749 |
| Cow position: | chr11:39060429-39060630 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 544-755 |
| Cow position: | chr11:33409090-33409296 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 544-756 |
| Cow position: | chr11:13042972-13043181 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 88, 104 |
| Conread position: | 544-764 |
| Cow position: | chr11:45646422-45646637 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 545-711 |
| Cow position: | chr11:71814877-71814715 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 545-729 |
| Cow position: | chr11:30964518-30964336 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 72, 106 |
| Conread position: | 545-729 |
| Cow position: | chr11:44032181-44032002 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 545-740 |
| Cow position: | chr11:29782332-29782145 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 545-743 |
| Cow position: | chr11:5201471-5201675 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 545-743 |
| Cow position: | chr11:30830448-30830637 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 545-744 |
| Cow position: | chr11:20205683-20205876 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 545-744 |
| Cow position: | chr11:30867352-30867159 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 545-744 |
| Cow position: | chr11:50152638-50152838 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 545-744 |
| Cow position: | chr11:71390399-71390585 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 545-749 |
| Cow position: | chr11:17036357-17036556 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 545-749 |
| Cow position: | chr11:42159887-42160082 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 545-749 |
| Cow position: | chr11:48544611-48544405 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 545-749 |
| Cow position: | chr11:63998915-63999116 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 76, 187 |
| Conread position: | 545-749 |
| Cow position: | chr11:80564472-80564265 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 69, 113 |
| Conread position: | 545-756 |
| Cow position: | chr11:29786318-29786534 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 75, 207 |
| Conread position: | 545-756 |
| Cow position: | chr11:81134994-81135203 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 545-758 |
| Cow position: | chr11:43360612-43360815 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 209, 83 |
| Conread position: | 545-759 |
| Cow position: | chr11:21843964-21844170 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 545-763 |
| Cow position: | chr11:17721626-17721845 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 76, 202 |
| Conread position: | 545-763 |
| Cow position: | chr11:42067039-42066818 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 546-701 |
| Cow position: | chr11:63484114-63483961 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 546-753 |
| Cow position: | chr11:18852077-18851876 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 546-758 |
| Cow position: | chr11:35669782-35669990 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 20, 7 |
| Conread position: | 548-712 |
| Cow position: | chr11:15278846-15279005 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 548-728 |
| Cow position: | chr11:30986808-30986633 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 548-740 |
| Cow position: | chr11:52380700-52380892 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 548-744 |
| Cow position: | chr11:17083141-17083334 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 548-744 |
| Cow position: | chr11:25119764-25119955 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 548-749 |
| Cow position: | chr11:18447329-18447520 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 548-749 |
| Cow position: | chr11:43914465-43914263 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 78, 113 |
| Conread position: | 548-752 |
| Cow position: | chr11:29308754-29308549 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 115 |
| Conread position: | 548-758 |
| Cow position: | chr11:13592911-13592697 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 548-759 |
| Cow position: | chr11:62889720-62889933 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 113 |
| Conread position: | 548-760 |
| Cow position: | chr11:62620548-62620337 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 62, 83 |
| Conread position: | 548-763 |
| Cow position: | chr11:51729446-51729243 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 206, 50 |
| Conread position: | 549-743 |
| Cow position: | chr11:8524947-8525136 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 549-744 |
| Cow position: | chr11:30894832-30895028 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 549-744 |
| Cow position: | chr11:42296456-42296644 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 549-749 |
| Cow position: | chr11:77319583-77319386 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 549-752 |
| Cow position: | chr11:63866490-63866690 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 100, 79 |
| Conread position: | 549-758 |
| Cow position: | chr11:34467733-34467533 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 549-765 |
| Cow position: | chr11:72292732-72292507 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 53, 206 |
| Conread position: | 550-749 |
| Cow position: | chr11:47772212-47772418 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 50, 204 |
| Conread position: | 551-763 |
| Cow position: | chr11:63435691-63435478 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 155 |
| Conread position: | 552-688 |
| Cow position: | chr11:85985881-85986018 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 552-744 |
| Cow position: | chr11:23407628-23407440 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 553-749 |
| Cow position: | chr11:34121362-34121170 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 111, 16 |
| Conread position: | 556-749 |
| Cow position: | chr11:62663078-62663260 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 562-747 |
| Cow position: | chr11:39499513-39499329 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 78, 66 |
| Conread position: | 573-739 |
| Cow position: | chr11:31410733-31410897 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 573-744 |
| Cow position: | chr11:3393067-3393233 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 575-744 |
| Cow position: | chr11:2575763-2575928 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 596-763 |
| Cow position: | chr11:79018937-79019102 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 159, 33 |
| Conread position: | 603-744 |
| Cow position: | chr11:28644202-28644063 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 608-729 |
| Cow position: | chr11:26845485-26845603 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 608-744 |
| Cow position: | chr11:69119404-69119269 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 608-746 |
| Cow position: | chr11:30955112-30954974 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 608-758 |
| Cow position: | chr11:23586750-23586600 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 146, 138 |
| Conread position: | 609-756 |
| Cow position: | chr11:83230288-83230435 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 611-744 |
| Cow position: | chr11:36328931-36329059 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 611-764 |
| Cow position: | chr11:44636648-44636795 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 616-749 |
| Cow position: | chr11:16342125-16342257 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 616-749 |
| Cow position: | chr11:30355160-30355030 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 625-753 |
| Cow position: | chr11:53553310-53553186 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
Show alignments to all cow chromosomes.