Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8003A13.5
        

               Conread position:
               493-744
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               512-695
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 8
               

               Conread position:
               520-749
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               26, 60
               

               Conread position:
               521-674
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               521-729
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               521-749
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               522-749
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               523-715
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               524-719
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               524-724
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 93
               

               Conread position:
               525-705
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               123, 102
               

               Conread position:
               525-715
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               525-744
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 156
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               525-756
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               525-757
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               93, 128
               

               Conread position:
               525-758
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               25, 106
               

               Conread position:
               525-759
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               24, 222
               

               Conread position:
               525-760
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               526-670
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               526-726
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               526-749
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               526-749
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               526-758
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               526-763
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               20, 50
               

               Conread position:
               526-763
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               527-680
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               527-706
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 106
               

               Conread position:
               527-718
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               19, 93
               

               Conread position:
               527-728
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               527-744
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               527-749
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               527-758
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               528-690
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               528-711
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               528-712
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               528-757
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               530-700
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               530-744
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               530-766
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               531-706
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               531-711
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               531-718
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               76, 24
               

               Conread position:
               531-744
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               531-758
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 221
               

               Conread position:
               531-758
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               90, 216
               

               Conread position:
               533-757
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               534-758
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 216
               

               Conread position:
               535-744
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               81, 95
               

               Conread position:
               535-763
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               536-728
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               536-744
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               10, 92
               

               Conread position:
               536-744
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               536-744
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               181, 67
               

               Conread position:
               536-744
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               536-749
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               536-749
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               536-763
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               536-763
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 69
               

               Conread position:
               536-763
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               218, 210
               

               Conread position:
               537-749
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 142
               

               Conread position:
               537-758
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               148, 40
               

               Conread position:
               538-729
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               538-729
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               538-740
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               7, 73
               

               Conread position:
               544-747
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               545-715
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               545-724
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               120, 91
               

               Conread position:
               545-729
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               545-737
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               90, 43
               

               Conread position:
               545-742
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               545-744
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               545-745
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               545-746
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               545-749
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               64, 86
               

               Conread position:
               545-749
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               545-759
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               546-718
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 109
               

               Conread position:
               546-759
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               85, 106
               

               Conread position:
               547-724
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               548-687
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               548-743
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               100, 22
               

               Conread position:
               548-743
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               132, 80
               

               Conread position:
               548-744
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               548-749
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               548-758
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 30
               

               Conread position:
               548-769
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               168, 58
               

               Conread position:
               549-753
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               57, 125
               

               Conread position:
               549-764
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               168, 80
               

               Conread position:
               550-729
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               551-744
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               554-749
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               596-744
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               603-744
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               607-749
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               612-739
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               616-749
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               62, 0
               
Show alignments to all cow chromosomes.