Cow genome map

Conread name: Ss1.1-Pig4-TMW8003A13.5

Conread position: 450-756
Cow position: chr14:33247661-33247369 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 206
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 17

Conread position: 501-707
Cow position: chr14:36151126-36151337 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 28, 133

Conread position: 512-709
Cow position: chr14:33618128-33618317 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 522-728
Cow position: chr14:20736439-20736644 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 18, 60

Conread position: 523-763
Cow position: chr14:18309475-18309239 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 26, 88

Conread position: 524-756
Cow position: chr14:21357386-21357615 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 175

Conread position: 524-758
Cow position: chr14:12033415-12033178 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 78, 141

Conread position: 525-729
Cow position: chr14:13731266-13731064 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 146, 93

Conread position: 525-729
Cow position: chr14:24785484-24785692 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 110

Conread position: 525-729
Cow position: chr14:47224543-47224332 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 187

Conread position: 525-744
Cow position: chr14:9307898-9308114 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 24

Conread position: 525-744
Cow position: chr14:19487132-19487344 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 85

Conread position: 525-744
Cow position: chr14:20826321-20826539 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 21, 104

Conread position: 525-749
Cow position: chr14:13845820-13846038 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 74, 0

Conread position: 525-749
Cow position: chr14:15470155-15469929 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 114

Conread position: 525-749
Cow position: chr14:18345894-18345679 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 72

Conread position: 525-749
Cow position: chr14:20110891-20110669 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 98

Conread position: 525-749
Cow position: chr14:20640799-20640577 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 104

Conread position: 525-749
Cow position: chr14:29734530-29734311 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 21, 49

Conread position: 525-756
Cow position: chr14:11576899-11577128 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 21, 131

Conread position: 525-756
Cow position: chr14:23424095-23424319 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 76

Conread position: 525-756
Cow position: chr14:23442855-23443080 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 77

Conread position: 525-758
Cow position: chr14:42155138-42154909 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 79

Conread position: 525-760
Cow position: chr14:20245340-20245104 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 114

Conread position: 526-742
Cow position: chr14:10706710-10706922 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 101, 0

Conread position: 526-744
Cow position: chr14:10851857-10852079 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 192

Conread position: 526-744
Cow position: chr14:47170519-47170305 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 93

Conread position: 526-749
Cow position: chr14:23682098-23682318 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 96

Conread position: 527-728
Cow position: chr14:4848182-4848380 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 19, 44

Conread position: 527-729
Cow position: chr14:8707391-8707583 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 527-729
Cow position: chr14:49824780-49824588 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 527-743
Cow position: chr14:13042591-13042803 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 19, 79

Conread position: 527-744
Cow position: chr14:41749923-41749711 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 93, 0

Conread position: 527-749
Cow position: chr14:16524302-16524526 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 143, 33

Conread position: 529-710
Cow position: chr14:32784285-32784100 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 529-715
Cow position: chr14:10937506-10937693 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 76, 20

Conread position: 530-701
Cow position: chr14:19852102-19851927 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 78

Conread position: 530-759
Cow position: chr14:1708821-1708592 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 17

Conread position: 530-763
Cow position: chr14:19618918-19618683 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 37, 104

Conread position: 531-754
Cow position: chr14:48838426-48838653 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 220

Conread position: 531-756
Cow position: chr14:12954541-12954325 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 79

Conread position: 532-744
Cow position: chr14:24945659-24945442 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 14, 42

Conread position: 532-748
Cow position: chr14:36775500-36775701 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 17, 67

Conread position: 533-718
Cow position: chr14:21530245-21530053 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 13, 175

Conread position: 533-744
Cow position: chr14:43868141-43868358 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 18, 152

Conread position: 533-749
Cow position: chr14:11729268-11729057 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 102

Conread position: 533-760
Cow position: chr14:27733445-27733667 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 13, 98

Conread position: 534-739
Cow position: chr14:21557185-21556982 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 536-718
Cow position: chr14:22988876-22989057 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 11, 94

Conread position: 536-749
Cow position: chr14:21224484-21224691 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 15, 92

Conread position: 536-758
Cow position: chr14:36443176-36442955 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 113

Conread position: 536-759
Cow position: chr14:29964858-29965083 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 129

Conread position: 536-761
Cow position: chr14:22941900-22941662 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 223

Conread position: 537-718
Cow position: chr14:12073114-12072933 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 92

Conread position: 537-742
Cow position: chr14:38747521-38747718 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 30

Conread position: 537-744
Cow position: chr14:45677071-45677278 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 9, 69

Conread position: 537-749
Cow position: chr14:25903370-25903584 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 97

Conread position: 537-749
Cow position: chr14:33791034-33791241 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 9, 88

Conread position: 537-753
Cow position: chr14:25225575-25225785 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 538-726
Cow position: chr14:4203248-4203067 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 538-758
Cow position: chr14:28115347-28115124 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 123

Conread position: 540-764
Cow position: chr14:26433403-26433174 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 212

Conread position: 542-707
Cow position: chr14:20035566-20035734 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 93

Conread position: 542-744
Cow position: chr14:16760247-16760449 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 135, 85

Conread position: 544-744
Cow position: chr14:15492441-15492643 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 27

Conread position: 545-690
Cow position: chr14:20667154-20667013 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 545-718
Cow position: chr14:5668270-5668095 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 76, 119

Conread position: 545-742
Cow position: chr14:25227998-25228188 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 545-744
Cow position: chr14:26442495-26442294 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 60, 158

Conread position: 545-749
Cow position: chr14:10078105-10078321 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 60, 97

Conread position: 545-749
Cow position: chr14:18301807-18302014 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 25

Conread position: 545-749
Cow position: chr14:20984187-20984391 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 111, 89

Conread position: 545-749
Cow position: chr14:33714823-33714625 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 113, 0

Conread position: 545-756
Cow position: chr14:20466787-20466990 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 92

Conread position: 545-758
Cow position: chr14:4877376-4877168 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 102, 67

Conread position: 545-784
Cow position: chr14:36254838-36254607 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 217, 57

Conread position: 547-715
Cow position: chr14:44751173-44751007 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 548-705
Cow position: chr14:15228398-15228550 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 12, 0

Conread position: 548-729
Cow position: chr14:11643392-11643216 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 548-744
Cow position: chr14:48426926-48427120 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 149

Conread position: 548-756
Cow position: chr14:40754390-40754187 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 548-758
Cow position: chr14:10609533-10609743 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 78, 24

Conread position: 549-714
Cow position: chr14:11280258-11280094 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 549-717
Cow position: chr14:34140337-34140167 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 549-728
Cow position: chr14:41156865-41156691 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 550-715
Cow position: chr14:27848035-27848205 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 23

Conread position: 550-718
Cow position: chr14:4481530-4481694 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 114, 65

Conread position: 550-756
Cow position: chr14:21535447-21535246 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 98, 68

Conread position: 551-759
Cow position: chr14:23078935-23078728 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 186, 77

Conread position: 551-769
Cow position: chr14:24527306-24527086 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 100

Conread position: 580-730
Cow position: chr14:28706928-28707082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 590-744
Cow position: chr14:33751435-33751584 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 590-759
Cow position: chr14:15491048-15491220 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 604-749
Cow position: chr14:34096658-34096514 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 95

Conread position: 611-744
Cow position: chr14:41210771-41210904 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 17

Conread position: 618-742
Cow position: chr14:19372264-19372386 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 631-753
Cow position: chr14:2038872-2038751 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 0

Show alignments to all cow chromosomes.