Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003A13.5 |
| Conread position: | 474-718 |
| Cow position: | chr18:33896185-33896432 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 128, 100 |
| Conread position: | 495-690 |
| Cow position: | chr18:4907353-4907161 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 513-749 |
| Cow position: | chr18:9974141-9974372 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 516-744 |
| Cow position: | chr18:3085316-3085557 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 517-749 |
| Cow position: | chr18:49841470-49841238 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 55 |
| Conread position: | 520-745 |
| Cow position: | chr18:9010889-9010666 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 521-727 |
| Cow position: | chr18:28322835-28322634 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 521-728 |
| Cow position: | chr18:22789908-22790112 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 522-709 |
| Cow position: | chr18:9596358-9596178 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 522-749 |
| Cow position: | chr18:43796775-43796999 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 522-749 |
| Cow position: | chr18:52414147-52413921 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 522-756 |
| Cow position: | chr18:50359507-50359281 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 25, 109 |
| Conread position: | 523-715 |
| Cow position: | chr18:54572110-54572303 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 99, 24 |
| Conread position: | 523-749 |
| Cow position: | chr18:15516995-15517215 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 524-744 |
| Cow position: | chr18:11672232-11672003 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 68, 171 |
| Conread position: | 524-749 |
| Cow position: | chr18:4884340-4884561 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 100, 107 |
| Conread position: | 524-754 |
| Cow position: | chr18:42479399-42479636 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 524-756 |
| Cow position: | chr18:44262804-44262580 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 93 |
| Conread position: | 524-758 |
| Cow position: | chr18:31556979-31557214 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 525-683 |
| Cow position: | chr18:41257738-41257899 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 159 |
| Conread position: | 525-697 |
| Cow position: | chr18:4485775-4485606 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 525-697 |
| Cow position: | chr18:50276064-50276236 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 104 |
| Conread position: | 525-723 |
| Cow position: | chr18:42431908-42432105 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 10, 103 |
| Conread position: | 525-727 |
| Cow position: | chr18:45573560-45573357 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 137 |
| Conread position: | 525-728 |
| Cow position: | chr18:42431433-42431635 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 21, 67 |
| Conread position: | 525-729 |
| Cow position: | chr18:49602862-49603068 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 135 |
| Conread position: | 525-743 |
| Cow position: | chr18:2773208-2773431 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 525-743 |
| Cow position: | chr18:2776711-2776934 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 525-744 |
| Cow position: | chr18:2793797-2794011 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 525-744 |
| Cow position: | chr18:8949620-8949835 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 38 |
| Conread position: | 525-744 |
| Cow position: | chr18:9040523-9040748 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 525-744 |
| Cow position: | chr18:12113191-12113404 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 525-749 |
| Cow position: | chr18:12117676-12117892 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 158, 24 |
| Conread position: | 525-749 |
| Cow position: | chr18:20641322-20641540 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 525-749 |
| Cow position: | chr18:23630436-23630648 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 525-749 |
| Cow position: | chr18:44917934-44917713 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 21, 65 |
| Conread position: | 525-769 |
| Cow position: | chr18:50632268-50632507 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 235, 24 |
| Conread position: | 526-744 |
| Cow position: | chr18:1571060-1571275 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 526-744 |
| Cow position: | chr18:11691228-11691448 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 20, 164 |
| Conread position: | 526-749 |
| Cow position: | chr18:18844189-18843970 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 526-758 |
| Cow position: | chr18:52251676-52251911 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 21, 140 |
| Conread position: | 527-729 |
| Cow position: | chr18:11857071-11856876 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 527-738 |
| Cow position: | chr18:35786228-35786022 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 527-741 |
| Cow position: | chr18:4152377-4152591 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 81, 102 |
| Conread position: | 527-742 |
| Cow position: | chr18:25598053-25598270 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 105 |
| Conread position: | 527-745 |
| Cow position: | chr18:47801919-47802131 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 527-748 |
| Cow position: | chr18:15613684-15613904 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 26, 83 |
| Conread position: | 527-749 |
| Cow position: | chr18:18592640-18592429 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 527-749 |
| Cow position: | chr18:47512169-47511962 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 527-758 |
| Cow position: | chr18:11867517-11867283 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 527-759 |
| Cow position: | chr18:34219730-34219977 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 235 |
| Conread position: | 528-729 |
| Cow position: | chr18:34444560-34444758 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 528-744 |
| Cow position: | chr18:10905024-10904810 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 528-744 |
| Cow position: | chr18:11779827-11779613 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 528-758 |
| Cow position: | chr18:3212054-3211824 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 21 |
| Conread position: | 529-725 |
| Cow position: | chr18:41724635-41724839 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 45, 110 |
| Conread position: | 529-728 |
| Cow position: | chr18:29065217-29065407 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 69 |
| Conread position: | 530-735 |
| Cow position: | chr18:6828950-6829163 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 129, 20 |
| Conread position: | 530-744 |
| Cow position: | chr18:4626615-4626825 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 101 |
| Conread position: | 530-753 |
| Cow position: | chr18:1954408-1954637 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 19 |
| Conread position: | 531-673 |
| Cow position: | chr18:30247833-30247973 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 531-728 |
| Cow position: | chr18:50004533-50004726 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 99 |
| Conread position: | 531-764 |
| Cow position: | chr18:2146420-2146639 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 220, 68 |
| Conread position: | 533-758 |
| Cow position: | chr18:9066873-9066644 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 97 |
| Conread position: | 534-749 |
| Cow position: | chr18:17390821-17391037 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 71, 159 |
| Conread position: | 534-767 |
| Cow position: | chr18:46048925-46048690 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 215 |
| Conread position: | 535-706 |
| Cow position: | chr18:55722668-55722499 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 535-743 |
| Cow position: | chr18:6310251-6310045 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 95 |
| Conread position: | 535-755 |
| Cow position: | chr18:29648947-29648734 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 536-704 |
| Cow position: | chr18:17974792-17974630 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 536-708 |
| Cow position: | chr18:1399184-1399359 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 536-708 |
| Cow position: | chr18:49441011-49440837 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 536-724 |
| Cow position: | chr18:38985859-38985679 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 536-729 |
| Cow position: | chr18:48407901-48407714 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 536-741 |
| Cow position: | chr18:8170922-8171122 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 82 |
| Conread position: | 536-743 |
| Cow position: | chr18:32251995-32252207 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 536-744 |
| Cow position: | chr18:10977045-10977250 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 536-744 |
| Cow position: | chr18:12242444-12242237 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 82, 50 |
| Conread position: | 536-744 |
| Cow position: | chr18:37189122-37189334 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 536-744 |
| Cow position: | chr18:47824606-47824809 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 93 |
| Conread position: | 536-745 |
| Cow position: | chr18:38937988-38937780 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 536-749 |
| Cow position: | chr18:10891679-10891471 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 536-760 |
| Cow position: | chr18:31082173-31082403 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 10, 100 |
| Conread position: | 536-764 |
| Cow position: | chr18:18918795-18919018 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 10, 67 |
| Conread position: | 536-769 |
| Cow position: | chr18:30341013-30341242 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 10, 181 |
| Conread position: | 537-729 |
| Cow position: | chr18:41703001-41702812 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 537-756 |
| Cow position: | chr18:24719477-24719262 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 70 |
| Conread position: | 537-758 |
| Cow position: | chr18:4555998-4556220 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 73, 160 |
| Conread position: | 537-763 |
| Cow position: | chr18:45558310-45558088 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 538-739 |
| Cow position: | chr18:45903730-45903929 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 160 |
| Conread position: | 538-743 |
| Cow position: | chr18:32189351-32189546 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 34 |
| Conread position: | 539-742 |
| Cow position: | chr18:35534986-35535184 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 545-705 |
| Cow position: | chr18:44205936-44206085 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 545-708 |
| Cow position: | chr18:22045253-22045417 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 142 |
| Conread position: | 545-710 |
| Cow position: | chr18:21143810-21143970 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 152, 59 |
| Conread position: | 545-724 |
| Cow position: | chr18:10576261-10576090 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 175, 84 |
| Conread position: | 545-727 |
| Cow position: | chr18:7952368-7952181 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 181 |
| Conread position: | 545-729 |
| Cow position: | chr18:7945355-7945173 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 545-739 |
| Cow position: | chr18:30359985-30360184 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 545-742 |
| Cow position: | chr18:12023481-12023675 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 545-744 |
| Cow position: | chr18:11791076-11790885 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 545-744 |
| Cow position: | chr18:14225546-14225354 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 545-744 |
| Cow position: | chr18:15809653-15809840 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 545-744 |
| Cow position: | chr18:33159101-33158903 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 545-744 |
| Cow position: | chr18:35367047-35367232 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 104, 23 |
| Conread position: | 545-744 |
| Cow position: | chr18:47547824-47548026 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 545-744 |
| Cow position: | chr18:48713700-48713511 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 173, 57 |
| Conread position: | 545-749 |
| Cow position: | chr18:9366080-9365875 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 172, 203 |
| Conread position: | 545-749 |
| Cow position: | chr18:28930483-28930680 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 545-749 |
| Cow position: | chr18:51383240-51383439 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 545-749 |
| Cow position: | chr18:52649181-52649391 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 208 |
| Conread position: | 545-753 |
| Cow position: | chr18:6881200-6881401 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 546-742 |
| Cow position: | chr18:22516379-22516573 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 546-758 |
| Cow position: | chr18:40047347-40047552 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 547-718 |
| Cow position: | chr18:51998686-51998859 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 81, 105 |
| Conread position: | 547-758 |
| Cow position: | chr18:12273810-12273604 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 35 |
| Conread position: | 548-702 |
| Cow position: | chr18:44548591-44548744 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 548-729 |
| Cow position: | chr18:31159117-31159298 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 34 |
| Conread position: | 548-755 |
| Cow position: | chr18:49038609-49038412 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 548-763 |
| Cow position: | chr18:51643214-51643424 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 206, 70 |
| Conread position: | 549-744 |
| Cow position: | chr18:28657765-28657951 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 549-749 |
| Cow position: | chr18:22568914-22569110 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 549-752 |
| Cow position: | chr18:6470246-6470048 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 69 |
| Conread position: | 550-711 |
| Cow position: | chr18:306563-306726 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 550-729 |
| Cow position: | chr18:4489748-4489933 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 551-744 |
| Cow position: | chr18:37187842-37188037 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 110 |
| Conread position: | 551-749 |
| Cow position: | chr18:11184091-11183897 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 552-708 |
| Cow position: | chr18:47419946-47419795 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 552-728 |
| Cow position: | chr18:43125228-43125062 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 559-753 |
| Cow position: | chr18:34834640-34834448 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 76, 140 |
| Conread position: | 571-715 |
| Cow position: | chr18:82103-81961 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 574-741 |
| Cow position: | chr18:4804138-4804308 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 75, 55 |
| Conread position: | 574-749 |
| Cow position: | chr18:8300154-8299975 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 604-749 |
| Cow position: | chr18:47705333-47705191 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 608-744 |
| Cow position: | chr18:25647153-25647288 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 610-742 |
| Cow position: | chr18:2765341-2765214 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 614-749 |
| Cow position: | chr18:49324349-49324477 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 616-732 |
| Cow position: | chr18:5733806-5733692 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 619-744 |
| Cow position: | chr18:51190514-51190636 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 623-749 |
| Cow position: | chr18:23505412-23505287 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 629-744 |
| Cow position: | chr18:11685057-11684942 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.