Cow genome map

Conread name: Ss1.1-Pig4-TMW8003A13.5

Conread position: 504-749
Cow position: chr20:30755557-30755311 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 125, 45

Conread position: 513-749
Cow position: chr20:24097262-24097033 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 83

Conread position: 517-744
Cow position: chr20:39398744-39398517 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 85, 114

Conread position: 518-749
Cow position: chr20:3255290-3255069 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 131, 16

Conread position: 520-740
Cow position: chr20:13269875-13269661 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 26, 84

Conread position: 520-768
Cow position: chr20:24314772-24315020 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 31, 50

Conread position: 522-758
Cow position: chr20:12581694-12581932 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 186
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 15, 111

Conread position: 523-744
Cow position: chr20:16935047-16935274 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 92

Conread position: 523-758
Cow position: chr20:5365185-5364952 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 26, 38

Conread position: 524-749
Cow position: chr20:20158386-20158168 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 524-755
Cow position: chr20:26040837-26041073 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 525-706
Cow position: chr20:22012641-22012470 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 525-713
Cow position: chr20:4931334-4931153 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 103

Conread position: 525-714
Cow position: chr20:24491773-24491962 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 142, 90

Conread position: 525-727
Cow position: chr20:14755588-14755787 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 107

Conread position: 525-739
Cow position: chr20:10209062-10208849 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 103

Conread position: 525-744
Cow position: chr20:18379634-18379415 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 164
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 98

Conread position: 525-744
Cow position: chr20:28982952-28982738 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 90, 0

Conread position: 525-749
Cow position: chr20:2298542-2298754 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 525-749
Cow position: chr20:23846409-23846633 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 14, 100

Conread position: 525-749
Cow position: chr20:26996789-26996562 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 21, 139

Conread position: 525-749
Cow position: chr20:38515043-38514811 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 140

Conread position: 525-755
Cow position: chr20:3564409-3564186 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 14, 91

Conread position: 525-758
Cow position: chr20:29845309-29845073 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 136

Conread position: 526-679
Cow position: chr20:11368109-11368261 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 19, 104

Conread position: 526-729
Cow position: chr20:15530114-15529912 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 46

Conread position: 526-749
Cow position: chr20:8547314-8547100 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 47

Conread position: 526-749
Cow position: chr20:8556017-8556237 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 526-749
Cow position: chr20:14807138-14806919 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 20, 102

Conread position: 526-756
Cow position: chr20:20984252-20984017 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 226

Conread position: 527-697
Cow position: chr20:38061521-38061683 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 527-719
Cow position: chr20:22065314-22065127 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 96

Conread position: 527-726
Cow position: chr20:19201786-19201585 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 133

Conread position: 527-729
Cow position: chr20:20590050-20590250 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 93

Conread position: 527-767
Cow position: chr20:14490494-14490263 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 136, 33

Conread position: 528-749
Cow position: chr20:38090166-38089945 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 22

Conread position: 528-758
Cow position: chr20:10200600-10200368 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 133

Conread position: 528-758
Cow position: chr20:17251969-17251740 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 21

Conread position: 529-712
Cow position: chr20:16977586-16977776 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 529-744
Cow position: chr20:2819797-2819579 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 73, 18

Conread position: 529-745
Cow position: chr20:21325577-21325361 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 80

Conread position: 529-764
Cow position: chr20:23792851-23792622 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 81

Conread position: 530-744
Cow position: chr20:15766366-15766146 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 530-749
Cow position: chr20:7737985-7738199 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 532-740
Cow position: chr20:13805565-13805357 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 84

Conread position: 532-758
Cow position: chr20:6240268-6240498 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 149

Conread position: 533-753
Cow position: chr20:28605455-28605238 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 13, 84

Conread position: 534-758
Cow position: chr20:21428404-21428183 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 12, 94

Conread position: 535-763
Cow position: chr20:12126057-12126287 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 213

Conread position: 536-729
Cow position: chr20:27407650-27407836 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 30

Conread position: 536-740
Cow position: chr20:32847584-32847385 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 13, 0

Conread position: 536-749
Cow position: chr20:8578498-8578281 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 215

Conread position: 536-758
Cow position: chr20:14620063-14620281 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 82

Conread position: 536-758
Cow position: chr20:14980262-14980487 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 93

Conread position: 537-749
Cow position: chr20:12239448-12239649 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 538-729
Cow position: chr20:19834589-19834779 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 57

Conread position: 539-691
Cow position: chr20:23506177-23506024 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 91

Conread position: 542-744
Cow position: chr20:19060603-19060801 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 178, 87

Conread position: 544-739
Cow position: chr20:14880021-14879830 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 74

Conread position: 544-739
Cow position: chr20:16291927-16291729 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 113

Conread position: 544-749
Cow position: chr20:12420384-12420586 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 545-710
Cow position: chr20:26387690-26387531 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 545-726
Cow position: chr20:4891884-4892065 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 545-743
Cow position: chr20:3148915-3148721 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 545-744
Cow position: chr20:11751888-11751690 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 111

Conread position: 545-744
Cow position: chr20:19635944-19636140 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 74

Conread position: 545-744
Cow position: chr20:24070036-24069842 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 545-744
Cow position: chr20:25009399-25009596 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 545-744
Cow position: chr20:31739983-31740183 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 19

Conread position: 545-744
Cow position: chr20:33623325-33623516 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 29, 72

Conread position: 545-749
Cow position: chr20:28441553-28441359 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 60

Conread position: 545-756
Cow position: chr20:36312277-36312483 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 50

Conread position: 545-763
Cow position: chr20:5703706-5703488 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 26

Conread position: 547-744
Cow position: chr20:5702954-5702760 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 153
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 43, 61

Conread position: 548-728
Cow position: chr20:40177475-40177297 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 548-744
Cow position: chr20:381903-382095 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 548-744
Cow position: chr20:7425967-7426161 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 548-758
Cow position: chr20:35444875-35445081 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 550-758
Cow position: chr20:25161902-25162103 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 181, 36

Conread position: 551-694
Cow position: chr20:12033398-12033535 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 554-760
Cow position: chr20:398087-398285 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 564-749
Cow position: chr20:17100574-17100395 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 59

Conread position: 570-741
Cow position: chr20:630733-630564 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 52, 0

Conread position: 577-714
Cow position: chr20:32463323-32463458 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 603-749
Cow position: chr20:9412662-9412520 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 608-749
Cow position: chr20:21815731-21815593 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 611-745
Cow position: chr20:11542114-11542252 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 24, 127

Conread position: 751-1200
Cow position: chr20:27625004-27625480 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Show alignments to all cow chromosomes.