Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003A13.5 |
| Conread position: | 517-743 |
| Cow position: | chr26:7314862-7314633 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 517-751 |
| Cow position: | chr26:9492157-9491930 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 523-765 |
| Cow position: | chr26:34060567-34060322 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 524-707 |
| Cow position: | chr26:10502954-10502776 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 524-729 |
| Cow position: | chr26:33037996-33038198 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 524-749 |
| Cow position: | chr26:19591705-19591489 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 524-758 |
| Cow position: | chr26:24240907-24240676 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 524-759 |
| Cow position: | chr26:34610956-34611186 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 23, 81 |
| Conread position: | 525-689 |
| Cow position: | chr26:12891743-12891906 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 24, 104 |
| Conread position: | 525-708 |
| Cow position: | chr26:21320174-21319992 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 525-730 |
| Cow position: | chr26:33466220-33466414 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 21, 47 |
| Conread position: | 525-744 |
| Cow position: | chr26:4854771-4854555 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 117, 102 |
| Conread position: | 525-744 |
| Cow position: | chr26:33201842-33202060 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 525-749 |
| Cow position: | chr26:18825055-18825279 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 21, 105 |
| Conread position: | 525-759 |
| Cow position: | chr26:22033706-22033480 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 44 |
| Conread position: | 525-763 |
| Cow position: | chr26:6714073-6714309 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 526-742 |
| Cow position: | chr26:8307303-8307516 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 526-744 |
| Cow position: | chr26:19446366-19446144 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 10, 169 |
| Conread position: | 526-744 |
| Cow position: | chr26:32517243-32517446 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 527-729 |
| Cow position: | chr26:6487563-6487766 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 19, 104 |
| Conread position: | 527-729 |
| Cow position: | chr26:13862812-13863009 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 19, 101 |
| Conread position: | 527-744 |
| Cow position: | chr26:28251382-28251163 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 19, 64 |
| Conread position: | 527-763 |
| Cow position: | chr26:5168618-5168389 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 227, 100 |
| Conread position: | 528-712 |
| Cow position: | chr26:13022687-13022505 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 528-729 |
| Cow position: | chr26:7524984-7525178 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 528-744 |
| Cow position: | chr26:12940634-12940410 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 12, 43 |
| Conread position: | 528-756 |
| Cow position: | chr26:33253091-33253317 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 530-742 |
| Cow position: | chr26:647500-647711 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 103, 192 |
| Conread position: | 530-742 |
| Cow position: | chr26:32566234-32566023 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 530-759 |
| Cow position: | chr26:12144893-12145122 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 217 |
| Conread position: | 531-718 |
| Cow position: | chr26:13705545-13705741 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 531-753 |
| Cow position: | chr26:34559947-34560166 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 11, 100 |
| Conread position: | 532-718 |
| Cow position: | chr26:29900837-29901025 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 14, 99 |
| Conread position: | 532-744 |
| Cow position: | chr26:34724652-34724861 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 14, 97 |
| Conread position: | 534-749 |
| Cow position: | chr26:20770069-20769857 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 536-741 |
| Cow position: | chr26:23925060-23924863 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 536-744 |
| Cow position: | chr26:9535729-9535528 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 536-749 |
| Cow position: | chr26:1328647-1328850 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 536-749 |
| Cow position: | chr26:33242110-33241895 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 536-753 |
| Cow position: | chr26:7687023-7687243 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 10, 99 |
| Conread position: | 536-758 |
| Cow position: | chr26:4584993-4585214 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 10, 154 |
| Conread position: | 537-749 |
| Cow position: | chr26:20291477-20291686 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 537-749 |
| Cow position: | chr26:33392613-33392400 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 82, 12 |
| Conread position: | 537-758 |
| Cow position: | chr26:25526464-25526245 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 538-749 |
| Cow position: | chr26:5836603-5836814 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 86, 209 |
| Conread position: | 539-718 |
| Cow position: | chr26:33112171-33112350 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 545-722 |
| Cow position: | chr26:31888937-31888764 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 545-728 |
| Cow position: | chr26:10700696-10700876 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 545-744 |
| Cow position: | chr26:5666248-5666058 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 24 |
| Conread position: | 545-749 |
| Cow position: | chr26:22892240-22892439 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 545-749 |
| Cow position: | chr26:31137258-31137458 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 545-753 |
| Cow position: | chr26:19636497-19636294 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 143, 24 |
| Conread position: | 545-758 |
| Cow position: | chr26:12893222-12893431 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 68 |
| Conread position: | 546-755 |
| Cow position: | chr26:13802315-13802113 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 546-760 |
| Cow position: | chr26:28423492-28423282 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 548-739 |
| Cow position: | chr26:16784029-16783839 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 169, 72 |
| Conread position: | 548-749 |
| Cow position: | chr26:11875020-11875215 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 548-749 |
| Cow position: | chr26:26887933-26888127 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 548-779 |
| Cow position: | chr26:29889310-29889537 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 206, 81 |
| Conread position: | 549-729 |
| Cow position: | chr26:15132844-15132662 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 549-749 |
| Cow position: | chr26:35704577-35704394 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 552-749 |
| Cow position: | chr26:27491295-27491492 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 69, 150 |
| Conread position: | 554-706 |
| Cow position: | chr26:29897382-29897235 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 607-759 |
| Cow position: | chr26:23315921-23315769 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 140 |
| Conread position: | 608-744 |
| Cow position: | chr26:12964553-12964684 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 608-749 |
| Cow position: | chr26:677836-677974 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 608-749 |
| Cow position: | chr26:14175429-14175288 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 139 |
| Conread position: | 610-751 |
| Cow position: | chr26:28410128-28409988 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 22, 121 |
Show alignments to all cow chromosomes.