Cow genome map

Conread name: Ss1.1-Pig4-TMW8003A13.5

Conread position: 508-744
Cow position: chr27:20068247-20068014 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 132
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 100, 121

Conread position: 512-729
Cow position: chr27:1184444-1184229 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 57

Conread position: 512-747
Cow position: chr27:24223687-24223918 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 192, 56

Conread position: 512-756
Cow position: chr27:23594049-23594295 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 27, 182

Conread position: 514-743
Cow position: chr27:24440485-24440260 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 58

Conread position: 520-744
Cow position: chr27:22220288-22220517 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 524-728
Cow position: chr27:4398742-4398544 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 76

Conread position: 524-729
Cow position: chr27:31231335-31231133 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 112, 0

Conread position: 524-744
Cow position: chr27:14670636-14670419 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 524-744
Cow position: chr27:31210294-31210510 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 104, 0

Conread position: 525-714
Cow position: chr27:27450138-27449952 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 525-728
Cow position: chr27:10581280-10581476 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 525-729
Cow position: chr27:11133832-11134034 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 104

Conread position: 525-744
Cow position: chr27:23560284-23560068 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 525-744
Cow position: chr27:26226544-26226327 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 105

Conread position: 525-744
Cow position: chr27:29164519-29164733 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 68

Conread position: 525-744
Cow position: chr27:30890046-30890254 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 525-747
Cow position: chr27:26400973-26400754 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 80

Conread position: 525-749
Cow position: chr27:15453957-15454175 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 21, 49

Conread position: 525-749
Cow position: chr27:19387767-19387985 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 525-749
Cow position: chr27:22035627-22035410 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 83

Conread position: 525-763
Cow position: chr27:31169361-31169128 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 80

Conread position: 526-744
Cow position: chr27:17397706-17397491 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 93

Conread position: 526-744
Cow position: chr27:20897276-20897062 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 104

Conread position: 526-758
Cow position: chr27:18435385-18435156 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 82

Conread position: 526-759
Cow position: chr27:7343682-7343451 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 143, 43

Conread position: 527-686
Cow position: chr27:22150946-22150789 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 527-708
Cow position: chr27:31153809-31153630 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 45

Conread position: 527-710
Cow position: chr27:29183480-29183287 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 527-741
Cow position: chr27:19576577-19576363 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 104

Conread position: 527-749
Cow position: chr27:19452745-19452969 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 222

Conread position: 527-756
Cow position: chr27:236999-237243 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 168

Conread position: 528-741
Cow position: chr27:29614789-29615002 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 18, 101

Conread position: 528-763
Cow position: chr27:29593885-29593647 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 48

Conread position: 529-706
Cow position: chr27:11528676-11528856 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 103

Conread position: 529-713
Cow position: chr27:27606543-27606364 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 530-744
Cow position: chr27:7412142-7412356 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 100

Conread position: 530-744
Cow position: chr27:28478333-28478543 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 82

Conread position: 531-728
Cow position: chr27:7425440-7425241 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 100

Conread position: 531-742
Cow position: chr27:26617167-26617367 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 531-745
Cow position: chr27:12425037-12425254 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 127

Conread position: 531-749
Cow position: chr27:426721-426936 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 531-749
Cow position: chr27:19685959-19685746 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 532-718
Cow position: chr27:23957269-23957458 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 533-725
Cow position: chr27:27529063-27528876 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 40

Conread position: 533-749
Cow position: chr27:28206555-28206766 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 76

Conread position: 534-744
Cow position: chr27:24693172-24693376 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 534-749
Cow position: chr27:26865354-26865151 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 534-749
Cow position: chr27:27389272-27389054 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 15

Conread position: 535-707
Cow position: chr27:26087075-26087242 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 535-717
Cow position: chr27:21951228-21951042 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 535-744
Cow position: chr27:10404362-10404153 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 119

Conread position: 536-691
Cow position: chr27:28062440-28062288 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 68

Conread position: 536-707
Cow position: chr27:22748083-22748254 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 93

Conread position: 536-708
Cow position: chr27:31183328-31183503 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 66, 17

Conread position: 536-711
Cow position: chr27:9253357-9253183 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 9, 94

Conread position: 536-714
Cow position: chr27:3498310-3498484 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 73

Conread position: 536-744
Cow position: chr27:15669019-15668808 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 537-744
Cow position: chr27:6319679-6319882 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 15, 66

Conread position: 537-755
Cow position: chr27:19508768-19508986 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 12, 93

Conread position: 538-749
Cow position: chr27:27055053-27055253 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 7, 64

Conread position: 542-729
Cow position: chr27:15859535-15859349 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 62, 158

Conread position: 544-712
Cow position: chr27:23477711-23477877 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 5, 88

Conread position: 544-729
Cow position: chr27:8630109-8629923 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 77, 49

Conread position: 545-729
Cow position: chr27:2949551-2949379 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 545-729
Cow position: chr27:13204230-13204407 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 545-742
Cow position: chr27:6106472-6106661 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 545-744
Cow position: chr27:21669347-21669154 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 41, 84

Conread position: 545-744
Cow position: chr27:22171067-22171260 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 545-744
Cow position: chr27:22180001-22179806 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 32

Conread position: 545-744
Cow position: chr27:23484981-23485172 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 545-749
Cow position: chr27:4944741-4944547 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 545-749
Cow position: chr27:23452228-23452428 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 545-753
Cow position: chr27:16705018-16705222 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 545-755
Cow position: chr27:29494133-29493924 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 186, 49

Conread position: 545-763
Cow position: chr27:16103576-16103789 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 120, 0

Conread position: 545-763
Cow position: chr27:26323207-26323427 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 191

Conread position: 545-764
Cow position: chr27:11480873-11480652 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 64, 56

Conread position: 545-769
Cow position: chr27:15003214-15002990 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 170
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 210, 201

Conread position: 546-742
Cow position: chr27:12459054-12459245 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 56, 83

Conread position: 548-705
Cow position: chr27:178631-178787 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 548-744
Cow position: chr27:26999655-26999459 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 86

Conread position: 548-748
Cow position: chr27:6282601-6282805 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 92, 103

Conread position: 551-729
Cow position: chr27:26504075-26504250 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 147, 0

Conread position: 551-769
Cow position: chr27:23108131-23107916 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 72, 166

Conread position: 553-758
Cow position: chr27:23890706-23890915 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 79, 197

Conread position: 554-744
Cow position: chr27:26238798-26238988 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 73, 101

Conread position: 589-744
Cow position: chr27:26959805-26959651 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 84, 39

Conread position: 608-749
Cow position: chr27:788967-788830 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 608-749
Cow position: chr27:16589873-16589735 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 608-749
Cow position: chr27:30489581-30489443 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 610-744
Cow position: chr27:4672843-4672979 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 39, 18

Show alignments to all cow chromosomes.