Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8003A13.5
        

               Conread position:
               508-744
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               100, 121
               

               Conread position:
               512-729
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               512-747
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               192, 56
               

               Conread position:
               512-756
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               27, 182
               

               Conread position:
               514-743
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               520-744
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               524-728
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               524-729
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               524-744
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               524-744
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               525-714
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               525-728
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               525-729
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               525-744
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               525-744
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 105
               

               Conread position:
               525-744
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               525-744
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               525-747
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               21, 49
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               525-749
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               525-763
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               526-744
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               526-744
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 104
               

               Conread position:
               526-758
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               526-759
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               143, 43
               

               Conread position:
               527-686
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               527-708
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               527-710
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               527-741
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               527-749
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 222
               

               Conread position:
               527-756
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               71, 168
               

               Conread position:
               528-741
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               528-763
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               529-706
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               529-713
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               530-744
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               530-744
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               531-728
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               531-742
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               531-745
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 127
               

               Conread position:
               531-749
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               531-749
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               532-718
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               533-725
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               533-749
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               534-744
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               534-749
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               534-749
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 15
               

               Conread position:
               535-707
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               535-717
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               535-744
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 119
               

               Conread position:
               536-691
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               536-707
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               536-708
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               536-711
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               9, 94
               

               Conread position:
               536-714
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               536-744
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               537-744
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               537-755
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               12, 93
               

               Conread position:
               538-749
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               7, 64
               

               Conread position:
               542-729
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               62, 158
               

               Conread position:
               544-712
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 88
               

               Conread position:
               544-729
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               545-729
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               545-729
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               545-742
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               545-744
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               41, 84
               

               Conread position:
               545-744
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               545-744
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               545-744
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               545-749
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               545-749
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               545-753
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               545-755
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               186, 49
               

               Conread position:
               545-763
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               545-763
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               65, 191
               

               Conread position:
               545-764
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               64, 56
               

               Conread position:
               545-769
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               210, 201
               

               Conread position:
               546-742
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 83
               

               Conread position:
               548-705
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               548-744
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               51, 86
               

               Conread position:
               548-748
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               92, 103
               

               Conread position:
               551-729
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               551-769
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               72, 166
               

               Conread position:
               553-758
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               79, 197
               

               Conread position:
               554-744
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               73, 101
               

               Conread position:
               589-744
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 39
               

               Conread position:
               608-749
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               608-749
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               608-749
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               610-744
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 18
               
Show alignments to all cow chromosomes.