Cow genome map

Conread name: Ss1.1-Pig4-TMW8003A13.5

Conread position: 477-732
Cow position: chr29:22028702-22028949 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 9

Conread position: 510-729
Cow position: chr29:1615151-1614935 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 519-744
Cow position: chr29:38979862-38980083 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 88

Conread position: 520-732
Cow position: chr29:13558552-13558336 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 14

Conread position: 523-744
Cow position: chr29:41112679-41112888 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 523-756
Cow position: chr29:31651614-31651391 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 169, 84

Conread position: 525-697
Cow position: chr29:7414705-7414539 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 47

Conread position: 525-715
Cow position: chr29:936414-936227 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 94

Conread position: 525-749
Cow position: chr29:20770555-20770334 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 107

Conread position: 525-753
Cow position: chr29:22613630-22613413 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 525-756
Cow position: chr29:1008028-1007802 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 525-756
Cow position: chr29:4070834-4070608 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 86

Conread position: 525-756
Cow position: chr29:22729778-22729547 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 106

Conread position: 525-759
Cow position: chr29:39038057-39038292 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 223

Conread position: 526-697
Cow position: chr29:24660884-24660723 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 526-749
Cow position: chr29:29308372-29308585 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 20, 77

Conread position: 527-739
Cow position: chr29:32215913-32215703 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 22, 66

Conread position: 527-744
Cow position: chr29:29923366-29923582 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 161
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 22, 78

Conread position: 528-740
Cow position: chr29:21666293-21666082 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 528-749
Cow position: chr29:23155442-23155215 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 72, 201

Conread position: 528-753
Cow position: chr29:29769146-29769368 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 99

Conread position: 530-703
Cow position: chr29:33143151-33143322 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 530-751
Cow position: chr29:22734900-22735121 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 35

Conread position: 530-756
Cow position: chr29:40791504-40791290 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 76

Conread position: 530-758
Cow position: chr29:42630323-42630098 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 17, 88

Conread position: 531-710
Cow position: chr29:44991219-44991399 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 100

Conread position: 531-714
Cow position: chr29:17282267-17282089 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 15, 40

Conread position: 531-729
Cow position: chr29:19420417-19420607 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 531-749
Cow position: chr29:4874686-4874896 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 186, 68

Conread position: 531-749
Cow position: chr29:36531070-36530854 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 0

Conread position: 531-753
Cow position: chr29:4423246-4423456 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 534-712
Cow position: chr29:4441006-4441181 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 534-743
Cow position: chr29:19125530-19125314 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 66, 15

Conread position: 534-749
Cow position: chr29:5063344-5063132 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 85, 0

Conread position: 535-692
Cow position: chr29:40112580-40112425 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 94

Conread position: 536-738
Cow position: chr29:43088507-43088308 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 73

Conread position: 536-744
Cow position: chr29:17297338-17297127 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 128

Conread position: 536-744
Cow position: chr29:19363909-19363702 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 89

Conread position: 536-749
Cow position: chr29:19762464-19762258 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 10, 37

Conread position: 536-749
Cow position: chr29:25737219-25737427 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 11, 36

Conread position: 536-749
Cow position: chr29:36781110-36781317 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 13, 81

Conread position: 537-718
Cow position: chr29:34274175-34274359 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 124

Conread position: 537-744
Cow position: chr29:31944066-31943857 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 0

Conread position: 537-745
Cow position: chr29:26540340-26540550 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 9, 88

Conread position: 537-758
Cow position: chr29:36357326-36357106 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 78, 159

Conread position: 538-739
Cow position: chr29:15798149-15797948 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 31

Conread position: 538-753
Cow position: chr29:9378833-9378620 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 90

Conread position: 544-729
Cow position: chr29:10058352-10058529 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 544-729
Cow position: chr29:30548965-30548782 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 28

Conread position: 544-744
Cow position: chr29:4479976-4480179 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 53, 116

Conread position: 544-758
Cow position: chr29:9310794-9310577 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 39, 159

Conread position: 545-718
Cow position: chr29:40763506-40763677 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 83

Conread position: 545-725
Cow position: chr29:43099559-43099735 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 545-728
Cow position: chr29:7443877-7444054 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 545-728
Cow position: chr29:36697947-36697764 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 26

Conread position: 545-744
Cow position: chr29:17110143-17109951 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 545-749
Cow position: chr29:5893036-5892832 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 26

Conread position: 545-749
Cow position: chr29:12680348-12680143 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 70, 96

Conread position: 545-749
Cow position: chr29:40117755-40117559 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 545-749
Cow position: chr29:44139055-44139256 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 545-759
Cow position: chr29:31929176-31928965 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 209, 55

Conread position: 545-761
Cow position: chr29:22162074-22162274 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 545-763
Cow position: chr29:25092294-25092086 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 210, 83

Conread position: 545-773
Cow position: chr29:25288729-25288960 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 137

Conread position: 546-739
Cow position: chr29:15796673-15796482 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 75, 22

Conread position: 546-758
Cow position: chr29:43544416-43544625 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 57

Conread position: 547-739
Cow position: chr29:17804718-17804531 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 547-749
Cow position: chr29:34358791-34358991 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 61, 8

Conread position: 548-725
Cow position: chr29:40350894-40351065 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 548-743
Cow position: chr29:5408955-5409149 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 0

Conread position: 548-749
Cow position: chr29:39111137-39111324 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 548-763
Cow position: chr29:41531038-41530822 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 116

Conread position: 549-749
Cow position: chr29:7290955-7290763 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 549-749
Cow position: chr29:32197880-32197684 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 549-751
Cow position: chr29:7624351-7624164 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 152
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 549-753
Cow position: chr29:29324234-29324437 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 130

Conread position: 549-765
Cow position: chr29:19949491-19949279 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 202, 80

Conread position: 550-749
Cow position: chr29:9709878-9709681 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 183, 55

Conread position: 554-749
Cow position: chr29:22723777-22723588 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 153
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 0

Conread position: 554-764
Cow position: chr29:23825031-23825239 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 201, 79

Conread position: 562-744
Cow position: chr29:1557100-1556922 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 573-739
Cow position: chr29:32176830-32176676 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 603-744
Cow position: chr29:18085704-18085563 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 607-744
Cow position: chr29:38978657-38978523 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 608-728
Cow position: chr29:17022275-17022157 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 608-744
Cow position: chr29:8926334-8926470 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 611-765
Cow position: chr29:742530-742679 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 144, 15

Show alignments to all cow chromosomes.