Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003A13.5 |
| Conread position: | 506-696 |
| Cow position: | chr6:54406527-54406719 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 44, 5 |
| Conread position: | 512-749 |
| Cow position: | chr6:2078551-2078786 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 513-706 |
| Cow position: | chr6:35743244-35743049 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 513-744 |
| Cow position: | chr6:66839460-66839231 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 518-744 |
| Cow position: | chr6:53024555-53024771 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 520-744 |
| Cow position: | chr6:15937594-15937822 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 147 |
| Conread position: | 521-749 |
| Cow position: | chr6:63066093-63065855 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 24, 236 |
| Conread position: | 522-712 |
| Cow position: | chr6:50577768-50577585 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 522-744 |
| Cow position: | chr6:44194300-44194516 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 13, 48 |
| Conread position: | 522-749 |
| Cow position: | chr6:60143942-60144169 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 523-712 |
| Cow position: | chr6:37994459-37994273 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 23, 84 |
| Conread position: | 523-726 |
| Cow position: | chr6:47540585-47540789 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 8, 135 |
| Conread position: | 523-749 |
| Cow position: | chr6:2547517-2547284 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 23, 114 |
| Conread position: | 523-758 |
| Cow position: | chr6:15446940-15447179 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 97, 84 |
| Conread position: | 523-758 |
| Cow position: | chr6:21535294-21535056 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 227 |
| Conread position: | 523-759 |
| Cow position: | chr6:17997061-17997301 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 23, 196 |
| Conread position: | 524-744 |
| Cow position: | chr6:12761535-12761312 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 52 |
| Conread position: | 524-744 |
| Cow position: | chr6:46466069-46465854 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 524-749 |
| Cow position: | chr6:693894-694122 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 524-756 |
| Cow position: | chr6:65871285-65871059 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 525-711 |
| Cow position: | chr6:19936318-19936504 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 98, 24 |
| Conread position: | 525-715 |
| Cow position: | chr6:54889855-54889661 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 77, 114 |
| Conread position: | 525-715 |
| Cow position: | chr6:68246581-68246772 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 97, 24 |
| Conread position: | 525-725 |
| Cow position: | chr6:14383928-14383727 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 525-729 |
| Cow position: | chr6:41657516-41657315 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 525-742 |
| Cow position: | chr6:6965146-6965362 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 525-742 |
| Cow position: | chr6:24468147-24468361 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 525-744 |
| Cow position: | chr6:3351282-3351061 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 525-744 |
| Cow position: | chr6:16091148-16090936 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 10 |
| Conread position: | 525-744 |
| Cow position: | chr6:42035022-42034805 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 105 |
| Conread position: | 525-744 |
| Cow position: | chr6:67451122-67451338 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 24 |
| Conread position: | 525-747 |
| Cow position: | chr6:17414199-17414417 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 188, 43 |
| Conread position: | 525-749 |
| Cow position: | chr6:15243514-15243284 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 525-749 |
| Cow position: | chr6:26155397-26155177 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 525-753 |
| Cow position: | chr6:61169013-61168780 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 66, 28 |
| Conread position: | 525-756 |
| Cow position: | chr6:38640482-38640255 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 525-757 |
| Cow position: | chr6:5330663-5330432 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 22 |
| Conread position: | 525-758 |
| Cow position: | chr6:23401741-23401973 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 525-764 |
| Cow position: | chr6:53546282-53546048 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 526-739 |
| Cow position: | chr6:55282043-55282256 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 83, 23 |
| Conread position: | 526-749 |
| Cow position: | chr6:47520306-47520082 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 222 |
| Conread position: | 526-749 |
| Cow position: | chr6:51581003-51581223 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 526-749 |
| Cow position: | chr6:60850949-60850729 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 526-758 |
| Cow position: | chr6:7119380-7119600 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 228, 72 |
| Conread position: | 526-760 |
| Cow position: | chr6:21004932-21004691 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 199 |
| Conread position: | 527-697 |
| Cow position: | chr6:7291560-7291395 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 527-714 |
| Cow position: | chr6:58173590-58173412 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 527-739 |
| Cow position: | chr6:53460323-53460529 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 527-745 |
| Cow position: | chr6:18954833-18955044 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 40, 26 |
| Conread position: | 527-757 |
| Cow position: | chr6:59602965-59603188 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 19, 78 |
| Conread position: | 527-760 |
| Cow position: | chr6:19293049-19292819 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 528-742 |
| Cow position: | chr6:60273763-60273976 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 27 |
| Conread position: | 528-744 |
| Cow position: | chr6:13653595-13653386 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 166 |
| Conread position: | 528-744 |
| Cow position: | chr6:23938300-23938093 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 528-749 |
| Cow position: | chr6:19264250-19264470 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 528-758 |
| Cow position: | chr6:64432179-64431956 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 176, 19 |
| Conread position: | 528-759 |
| Cow position: | chr6:58725615-58725388 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 229, 100 |
| Conread position: | 529-749 |
| Cow position: | chr6:13687568-13687783 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 12, 94 |
| Conread position: | 529-749 |
| Cow position: | chr6:25614841-25615066 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 17, 223 |
| Conread position: | 529-769 |
| Cow position: | chr6:5601949-5601710 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 530-743 |
| Cow position: | chr6:46282745-46282970 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 530-744 |
| Cow position: | chr6:36196454-36196243 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 530-749 |
| Cow position: | chr6:15305817-15305600 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 88, 170 |
| Conread position: | 531-749 |
| Cow position: | chr6:32287877-32287667 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 77 |
| Conread position: | 531-763 |
| Cow position: | chr6:143132-143360 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 82 |
| Conread position: | 533-729 |
| Cow position: | chr6:25772975-25773168 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 534-716 |
| Cow position: | chr6:39433242-39433067 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 534-728 |
| Cow position: | chr6:63168520-63168715 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 102 |
| Conread position: | 535-744 |
| Cow position: | chr6:46859929-46860134 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 536-698 |
| Cow position: | chr6:66058467-66058629 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 536-707 |
| Cow position: | chr6:57545988-57546158 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 536-715 |
| Cow position: | chr6:34423219-34423397 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 91 |
| Conread position: | 536-730 |
| Cow position: | chr6:60186413-60186616 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 15, 104 |
| Conread position: | 536-742 |
| Cow position: | chr6:8966330-8966132 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 67 |
| Conread position: | 536-743 |
| Cow position: | chr6:36203064-36202855 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 10, 165 |
| Conread position: | 536-744 |
| Cow position: | chr6:21470193-21470396 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 107, 17 |
| Conread position: | 536-744 |
| Cow position: | chr6:37332353-37332141 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 536-744 |
| Cow position: | chr6:51933779-51933587 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 536-744 |
| Cow position: | chr6:63720434-63720233 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 14, 67 |
| Conread position: | 536-749 |
| Cow position: | chr6:47575131-47574935 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 536-758 |
| Cow position: | chr6:37395163-37395382 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 218, 79 |
| Conread position: | 537-691 |
| Cow position: | chr6:1945197-1945041 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 537-742 |
| Cow position: | chr6:21293256-21293461 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 538-739 |
| Cow position: | chr6:1941595-1941794 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 538-749 |
| Cow position: | chr6:120476-120276 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 538-749 |
| Cow position: | chr6:10105745-10105950 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 538-749 |
| Cow position: | chr6:23696233-23696029 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 11, 33 |
| Conread position: | 542-707 |
| Cow position: | chr6:63182519-63182358 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 543-763 |
| Cow position: | chr6:38207253-38207475 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 544-707 |
| Cow position: | chr6:32268655-32268818 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 544-713 |
| Cow position: | chr6:38033090-38032920 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 544-749 |
| Cow position: | chr6:29485315-29485111 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 157, 84 |
| Conread position: | 545-703 |
| Cow position: | chr6:8726908-8726751 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 545-704 |
| Cow position: | chr6:4699936-4699780 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 545-713 |
| Cow position: | chr6:35341956-35342118 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 545-724 |
| Cow position: | chr6:39358112-39358288 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 545-727 |
| Cow position: | chr6:36537132-36537311 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 545-728 |
| Cow position: | chr6:49398398-49398571 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 545-729 |
| Cow position: | chr6:21350800-21350985 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 63, 135 |
| Conread position: | 545-739 |
| Cow position: | chr6:3937018-3936822 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 76, 163 |
| Conread position: | 545-739 |
| Cow position: | chr6:21083310-21083503 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 545-740 |
| Cow position: | chr6:12623740-12623552 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 545-742 |
| Cow position: | chr6:62056842-62056649 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 545-744 |
| Cow position: | chr6:38853425-38853626 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 545-744 |
| Cow position: | chr6:50504687-50504489 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 85 |
| Conread position: | 545-749 |
| Cow position: | chr6:6168918-6168719 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 139, 78 |
| Conread position: | 545-749 |
| Cow position: | chr6:30024108-30023914 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 545-749 |
| Cow position: | chr6:32866990-32867189 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 162, 45 |
| Conread position: | 545-749 |
| Cow position: | chr6:52478180-52478382 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 545-749 |
| Cow position: | chr6:61110013-61109816 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 545-752 |
| Cow position: | chr6:9302492-9302691 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 545-758 |
| Cow position: | chr6:22985631-22985836 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 545-760 |
| Cow position: | chr6:7128173-7128385 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 545-762 |
| Cow position: | chr6:5609211-5609429 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 182 |
| Conread position: | 545-763 |
| Cow position: | chr6:67069584-67069801 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 128, 26 |
| Conread position: | 546-749 |
| Cow position: | chr6:61523975-61524176 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 56, 7 |
| Conread position: | 546-753 |
| Cow position: | chr6:4383704-4383505 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 548-714 |
| Cow position: | chr6:32006228-32006392 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 548-740 |
| Cow position: | chr6:44543919-44544111 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 548-742 |
| Cow position: | chr6:18117823-18118014 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 548-763 |
| Cow position: | chr6:21475953-21475741 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 206, 21 |
| Conread position: | 549-744 |
| Cow position: | chr6:48097376-48097571 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 125, 22 |
| Conread position: | 549-744 |
| Cow position: | chr6:54133038-54132848 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 72, 43 |
| Conread position: | 549-763 |
| Cow position: | chr6:17068428-17068633 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 550-729 |
| Cow position: | chr6:40682442-40682615 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 550-744 |
| Cow position: | chr6:68816396-68816200 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 550-758 |
| Cow position: | chr6:2585167-2584961 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 82, 98 |
| Conread position: | 551-749 |
| Cow position: | chr6:45690393-45690581 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 554-744 |
| Cow position: | chr6:1870975-1871165 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 77 |
| Conread position: | 554-757 |
| Cow position: | chr6:60740232-60740035 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 559-690 |
| Cow position: | chr6:53235436-53235566 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 559-742 |
| Cow position: | chr6:61269529-61269347 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 71 |
| Conread position: | 564-740 |
| Cow position: | chr6:36920763-36920937 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 564-744 |
| Cow position: | chr6:8637489-8637311 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 164, 48 |
| Conread position: | 565-749 |
| Cow position: | chr6:67643478-67643662 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 52, 182 |
| Conread position: | 566-749 |
| Cow position: | chr6:58459927-58459750 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 566-768 |
| Cow position: | chr6:26915538-26915340 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 189, 64 |
| Conread position: | 574-744 |
| Cow position: | chr6:20097756-20097926 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 575-749 |
| Cow position: | chr6:57571679-57571508 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 590-749 |
| Cow position: | chr6:48112382-48112226 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 596-749 |
| Cow position: | chr6:6401129-6400983 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 607-749 |
| Cow position: | chr6:21869479-21869620 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 607-763 |
| Cow position: | chr6:28900494-28900340 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 136, 22 |
| Conread position: | 608-744 |
| Cow position: | chr6:54349862-54349727 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 608-749 |
| Cow position: | chr6:23465866-23466004 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 22 |
| Conread position: | 608-749 |
| Cow position: | chr6:54990834-54990972 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 611-749 |
| Cow position: | chr6:53090172-53090038 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 615-753 |
| Cow position: | chr6:50976210-50976073 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 622-749 |
| Cow position: | chr6:28976885-28977011 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 124, 0 |
Show alignments to all cow chromosomes.