Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003A13.5 |
| Conread position: | 472-759 |
| Cow position: | chrX:16836001-16836280 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 77, 43 |
| Conread position: | 499-763 |
| Cow position: | chrX:3806938-3806683 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 255, 5 |
| Conread position: | 501-744 |
| Cow position: | chrX:1466431-1466182 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 134 |
| Conread position: | 502-728 |
| Cow position: | chrX:13177217-13177440 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 514-718 |
| Cow position: | chrX:22482437-22482644 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 189 |
| Conread position: | 515-744 |
| Cow position: | chrX:29230260-29230019 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 515-758 |
| Cow position: | chrX:38587597-38587837 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 32 |
| Conread position: | 516-744 |
| Cow position: | chrX:34532762-34532540 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 517-728 |
| Cow position: | chrX:27442289-27442505 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 140 |
| Conread position: | 521-697 |
| Cow position: | chrX:14135920-14135745 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 108 |
| Conread position: | 521-749 |
| Cow position: | chrX:22392745-22392968 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 522-763 |
| Cow position: | chrX:4399363-4399127 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 158 |
| Conread position: | 523-694 |
| Cow position: | chrX:4486779-4486954 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 523-711 |
| Cow position: | chrX:296636-296444 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 24, 116 |
| Conread position: | 523-728 |
| Cow position: | chrX:30337710-30337918 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 23, 172 |
| Conread position: | 524-712 |
| Cow position: | chrX:46068523-46068707 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 524-718 |
| Cow position: | chrX:35409992-35409798 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 524-724 |
| Cow position: | chrX:36367694-36367895 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 99, 25 |
| Conread position: | 524-744 |
| Cow position: | chrX:4152802-4153011 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 79 |
| Conread position: | 524-755 |
| Cow position: | chrX:6599535-6599772 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 524-758 |
| Cow position: | chrX:42855703-42855464 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 525-704 |
| Cow position: | chrX:11589127-11589307 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 525-705 |
| Cow position: | chrX:39642387-39642564 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 525-718 |
| Cow position: | chrX:11529579-11529392 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 525-718 |
| Cow position: | chrX:42875451-42875258 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 106 |
| Conread position: | 525-727 |
| Cow position: | chrX:12437041-12437233 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 525-729 |
| Cow position: | chrX:2314378-2314584 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 96, 138 |
| Conread position: | 525-729 |
| Cow position: | chrX:5487708-5487897 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 525-729 |
| Cow position: | chrX:42894163-42893961 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 21, 71 |
| Conread position: | 525-732 |
| Cow position: | chrX:35885491-35885695 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 91 |
| Conread position: | 525-741 |
| Cow position: | chrX:19394796-19394576 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 525-741 |
| Cow position: | chrX:34412089-34411869 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 525-743 |
| Cow position: | chrX:4289675-4289463 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 80 |
| Conread position: | 525-744 |
| Cow position: | chrX:34504813-34505029 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 161, 103 |
| Conread position: | 525-749 |
| Cow position: | chrX:11325868-11326081 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 525-749 |
| Cow position: | chrX:27145841-27145620 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 525-749 |
| Cow position: | chrX:35986068-35985836 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 118 |
| Conread position: | 525-749 |
| Cow position: | chrX:41871297-41871083 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 525-749 |
| Cow position: | chrX:47345573-47345343 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 21, 228 |
| Conread position: | 525-758 |
| Cow position: | chrX:25207621-25207848 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 525-759 |
| Cow position: | chrX:20584551-20584334 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 525-762 |
| Cow position: | chrX:20340415-20340641 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 26, 103 |
| Conread position: | 525-805 |
| Cow position: | chrX:29467542-29467816 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 264, 88 |
| Conread position: | 526-707 |
| Cow position: | chrX:17525639-17525810 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 526-718 |
| Cow position: | chrX:20666662-20666855 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 19, 91 |
| Conread position: | 526-728 |
| Cow position: | chrX:5919739-5919528 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 104 |
| Conread position: | 526-749 |
| Cow position: | chrX:29050478-29050266 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 526-749 |
| Cow position: | chrX:42480065-42479849 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 526-756 |
| Cow position: | chrX:16984875-16984651 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 93 |
| Conread position: | 526-758 |
| Cow position: | chrX:32821279-32821035 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 146 |
| Conread position: | 526-796 |
| Cow position: | chrX:32867110-32866842 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 527-744 |
| Cow position: | chrX:28940481-28940262 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 148, 23 |
| Conread position: | 527-749 |
| Cow position: | chrX:27668723-27668942 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 527-749 |
| Cow position: | chrX:33854990-33855204 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 528-718 |
| Cow position: | chrX:5097555-5097753 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 528-744 |
| Cow position: | chrX:6544485-6544277 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 528-744 |
| Cow position: | chrX:37780877-37781089 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 528-744 |
| Cow position: | chrX:43115386-43115171 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 85, 102 |
| Conread position: | 528-749 |
| Cow position: | chrX:12972916-12972697 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 528-749 |
| Cow position: | chrX:17231973-17231751 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 94, 21 |
| Conread position: | 528-749 |
| Cow position: | chrX:42927589-42927808 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 529-707 |
| Cow position: | chrX:23497463-23497634 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 529-728 |
| Cow position: | chrX:32942843-32943040 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 529-729 |
| Cow position: | chrX:12979598-12979799 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 529-729 |
| Cow position: | chrX:18439234-18439031 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 529-744 |
| Cow position: | chrX:24749326-24749108 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 175 |
| Conread position: | 529-744 |
| Cow position: | chrX:27431687-27431898 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 529-744 |
| Cow position: | chrX:34792086-34792291 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 529-749 |
| Cow position: | chrX:9650787-9651008 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 102 |
| Conread position: | 529-749 |
| Cow position: | chrX:11656314-11656097 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 529-759 |
| Cow position: | chrX:34565521-34565291 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 131 |
| Conread position: | 530-701 |
| Cow position: | chrX:41215559-41215385 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 530-729 |
| Cow position: | chrX:34314257-34314059 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 99 |
| Conread position: | 530-745 |
| Cow position: | chrX:13913311-13913094 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 530-749 |
| Cow position: | chrX:5118264-5118486 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 530-749 |
| Cow position: | chrX:6414267-6414063 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 530-749 |
| Cow position: | chrX:17949256-17949480 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 105 |
| Conread position: | 530-758 |
| Cow position: | chrX:40320642-40320412 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 101, 123 |
| Conread position: | 531-703 |
| Cow position: | chrX:4750102-4750271 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 531-728 |
| Cow position: | chrX:34377174-34376978 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 15, 98 |
| Conread position: | 531-744 |
| Cow position: | chrX:38853447-38853218 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 185 |
| Conread position: | 533-758 |
| Cow position: | chrX:38218947-38218720 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 534-730 |
| Cow position: | chrX:34991590-34991398 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 534-749 |
| Cow position: | chrX:26881329-26881549 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 53 |
| Conread position: | 534-764 |
| Cow position: | chrX:38302049-38301809 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 11, 222 |
| Conread position: | 535-749 |
| Cow position: | chrX:22075028-22074811 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 535-759 |
| Cow position: | chrX:40685095-40685322 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 16, 215 |
| Conread position: | 536-714 |
| Cow position: | chrX:23471638-23471816 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 13, 93 |
| Conread position: | 536-718 |
| Cow position: | chrX:40035208-40035394 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 536-718 |
| Cow position: | chrX:41453527-41453348 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 536-739 |
| Cow position: | chrX:37072617-37072414 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 536-743 |
| Cow position: | chrX:14883728-14883935 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 92 |
| Conread position: | 536-744 |
| Cow position: | chrX:24633929-24633704 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 536-744 |
| Cow position: | chrX:29541997-29542197 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 536-749 |
| Cow position: | chrX:20583890-20583682 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 10, 36 |
| Conread position: | 536-757 |
| Cow position: | chrX:38549675-38549452 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 65, 95 |
| Conread position: | 536-758 |
| Cow position: | chrX:10251972-10252192 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 10, 86 |
| Conread position: | 536-758 |
| Cow position: | chrX:33654613-33654838 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 129 |
| Conread position: | 536-758 |
| Cow position: | chrX:38094296-38094509 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 37 |
| Conread position: | 536-763 |
| Cow position: | chrX:9251933-9252161 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 10, 95 |
| Conread position: | 537-744 |
| Cow position: | chrX:32208598-32208802 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 537-749 |
| Cow position: | chrX:31480194-31479987 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 537-752 |
| Cow position: | chrX:40108283-40108506 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 8, 218 |
| Conread position: | 537-758 |
| Cow position: | chrX:27261419-27261197 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 538-744 |
| Cow position: | chrX:5026479-5026276 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 538-782 |
| Cow position: | chrX:27446911-27446667 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 7, 109 |
| Conread position: | 539-763 |
| Cow position: | chrX:42836407-42836183 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 125 |
| Conread position: | 545-701 |
| Cow position: | chrX:40556243-40556396 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 545-715 |
| Cow position: | chrX:31983358-31983536 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 545-729 |
| Cow position: | chrX:8327125-8326939 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 545-744 |
| Cow position: | chrX:21986081-21986270 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 545-744 |
| Cow position: | chrX:39290575-39290379 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 545-746 |
| Cow position: | chrX:35382822-35383018 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 545-747 |
| Cow position: | chrX:2936173-2935974 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 545-749 |
| Cow position: | chrX:17795199-17794997 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 545-753 |
| Cow position: | chrX:40826530-40826739 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 112, 203 |
| Conread position: | 545-755 |
| Cow position: | chrX:8869184-8869392 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 545-755 |
| Cow position: | chrX:38642462-38642259 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 545-758 |
| Cow position: | chrX:1122327-1122537 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 545-758 |
| Cow position: | chrX:27074831-27075045 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 545-763 |
| Cow position: | chrX:29601609-29601827 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 209, 201 |
| Conread position: | 546-744 |
| Cow position: | chrX:34836853-34837044 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 548-685 |
| Cow position: | chrX:31279710-31279845 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 548-702 |
| Cow position: | chrX:6480378-6480534 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 548-704 |
| Cow position: | chrX:6640641-6640487 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 548-718 |
| Cow position: | chrX:35681784-35681613 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 75, 107 |
| Conread position: | 548-726 |
| Cow position: | chrX:12095554-12095734 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 117 |
| Conread position: | 548-731 |
| Cow position: | chrX:41858667-41858848 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 105, 81 |
| Conread position: | 548-738 |
| Cow position: | chrX:23358900-23359085 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 548-740 |
| Cow position: | chrX:38560767-38560583 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 100, 55 |
| Conread position: | 548-743 |
| Cow position: | chrX:27306656-27306475 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 548-753 |
| Cow position: | chrX:22115097-22115305 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 26, 202 |
| Conread position: | 548-758 |
| Cow position: | chrX:20168772-20168564 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 23 |
| Conread position: | 548-758 |
| Cow position: | chrX:41027377-41027165 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 548-758 |
| Cow position: | chrX:42449796-42450008 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 97 |
| Conread position: | 548-758 |
| Cow position: | chrX:43008827-43008615 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 73, 115 |
| Conread position: | 549-743 |
| Cow position: | chrX:9201759-9201569 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 549-744 |
| Cow position: | chrX:20957455-20957258 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 53, 84 |
| Conread position: | 549-756 |
| Cow position: | chrX:31436685-31436483 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 550-744 |
| Cow position: | chrX:42380897-42381092 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 67, 22 |
| Conread position: | 550-749 |
| Cow position: | chrX:4467166-4466983 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 550-749 |
| Cow position: | chrX:19469300-19469490 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 550-759 |
| Cow position: | chrX:42246966-42247177 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 73, 113 |
| Conread position: | 555-712 |
| Cow position: | chrX:35543094-35542939 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 556-758 |
| Cow position: | chrX:31294360-31294566 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 62, 194 |
| Conread position: | 560-759 |
| Cow position: | chrX:14275542-14275737 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 7, 59 |
| Conread position: | 562-742 |
| Cow position: | chrX:13647581-13647763 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 569-756 |
| Cow position: | chrX:169345-169536 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 152 |
| Conread position: | 574-763 |
| Cow position: | chrX:4515879-4515686 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 143, 64 |
| Conread position: | 575-728 |
| Cow position: | chrX:29687985-29688139 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 46, 80 |
| Conread position: | 596-744 |
| Cow position: | chrX:34508710-34508564 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 608-749 |
| Cow position: | chrX:40269648-40269507 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 139 |
| Conread position: | 608-749 |
| Cow position: | chrX:40531889-40532027 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 40, 21 |
| Conread position: | 609-764 |
| Cow position: | chrX:31312182-31312031 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 610-764 |
| Cow position: | chrX:878226-878378 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 624-744 |
| Cow position: | chrX:46429679-46429799 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.