Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003A18.5 | 
| Conread position: | 9-414 | 
| Cow position: | chr6:45936839-45937263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 57 | 
| Conread position: | 53-398 | 
| Cow position: | chr6:39956653-39957013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 15, 53 | 
| Conread position: | 55-663 | 
| Cow position: | chr6:37385745-37386391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 14 | 
| Conread position: | 56-388 | 
| Cow position: | chr6:15031264-15030917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 65, 13 | 
| Conread position: | 62-414 | 
| Cow position: | chr6:42266328-42266704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 9, 276 | 
| Conread position: | 62-613 | 
| Cow position: | chr6:40864437-40863832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 268 | 
| Conread position: | 62-619 | 
| Cow position: | chr6:36530879-36531477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 190 | 
| Conread position: | 62-634 | 
| Cow position: | chr6:1536302-1536923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 194 | 
| Conread position: | 62-634 | 
| Cow position: | chr6:55539677-55539053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 193 | 
| Conread position: | 62-669 | 
| Cow position: | chr6:41408000-41408656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 191 | 
| Conread position: | 63-414 | 
| Cow position: | chr6:67266868-67267229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 55, 19 | 
| Conread position: | 63-417 | 
| Cow position: | chr6:16767241-16766872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 8, 268 | 
| Conread position: | 63-662 | 
| Cow position: | chr6:16595598-16596228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 278 | 
| Conread position: | 64-400 | 
| Cow position: | chr6:11870335-11869983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 15, 189 | 
| Conread position: | 66-351 | 
| Cow position: | chr6:28135532-28135836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 21, 187 | 
| Conread position: | 66-414 | 
| Cow position: | chr6:1275385-1275024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 46, 242 | 
| Conread position: | 66-414 | 
| Cow position: | chr6:28064588-28064956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 188 | 
| Conread position: | 66-414 | 
| Cow position: | chr6:34018011-34018378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 187 | 
| Conread position: | 66-416 | 
| Cow position: | chr6:39911924-39912292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 86 | 
| Conread position: | 66-618 | 
| Cow position: | chr6:12663715-12663113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 185 | 
| Conread position: | 66-634 | 
| Cow position: | chr6:28488967-28488360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 187 | 
| Conread position: | 66-634 | 
| Cow position: | chr6:50570800-50571409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 196 | 
| Conread position: | 67-380 | 
| Cow position: | chr6:6165258-6165574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 10, 38 | 
| Conread position: | 68-669 | 
| Cow position: | chr6:10235809-10236448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 35 | 
| Conread position: | 70-380 | 
| Cow position: | chr6:1053831-1053504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 16, 81 | 
| Conread position: | 70-400 | 
| Cow position: | chr6:8756215-8755866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 183 | 
| Conread position: | 70-400 | 
| Cow position: | chr6:58952518-58952170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 17, 260 | 
| Conread position: | 70-408 | 
| Cow position: | chr6:24241893-24242250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 183 | 
| Conread position: | 70-408 | 
| Cow position: | chr6:28171509-28171863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 255 | 
| Conread position: | 70-408 | 
| Cow position: | chr6:51876432-51876783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 98 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:4467213-4467576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 29 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:5947173-5946811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 261 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:8536691-8536330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 181 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:11722592-11722231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 17, 260 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:34504919-34504556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 17, 82 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:41231091-41231452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 125 | 
| Conread position: | 70-414 | 
| Cow position: | chr6:43778128-43778484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 28 | 
| Conread position: | 70-415 | 
| Cow position: | chr6:38989193-38988844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 16, 53 | 
| Conread position: | 70-418 | 
| Cow position: | chr6:60875900-60876269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 184 | 
| Conread position: | 70-612 | 
| Cow position: | chr6:25791096-25790503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 80 | 
| Conread position: | 70-612 | 
| Cow position: | chr6:39999854-39999261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 183 | 
| Conread position: | 70-619 | 
| Cow position: | chr6:21975555-21976154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 183 | 
| Conread position: | 70-619 | 
| Cow position: | chr6:34844110-34843510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 183 | 
| Conread position: | 70-619 | 
| Cow position: | chr6:41191927-41192529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 606 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 19 | 
| Conread position: | 70-634 | 
| Cow position: | chr6:48970-48354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 229 | 
| Conread position: | 70-634 | 
| Cow position: | chr6:3485796-3485201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 183 | 
| Conread position: | 70-634 | 
| Cow position: | chr6:3886904-3886287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 621 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 182 | 
| Conread position: | 70-634 | 
| Cow position: | chr6:15138564-15137955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 261 | 
| Conread position: | 70-634 | 
| Cow position: | chr6:38874056-38873443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 69 | 
| Conread position: | 70-634 | 
| Cow position: | chr6:51717148-51717773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 187 | 
| Conread position: | 70-655 | 
| Cow position: | chr6:12514122-12514730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 172 | 
| Conread position: | 70-656 | 
| Cow position: | chr6:6720590-6721210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 49 | 
| Conread position: | 70-656 | 
| Cow position: | chr6:16624420-16625014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 17, 219 | 
| Conread position: | 71-400 | 
| Cow position: | chr6:65867392-65867737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 51, 260 | 
| Conread position: | 71-414 | 
| Cow position: | chr6:10267482-10267127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 5, 52 | 
| Conread position: | 71-414 | 
| Cow position: | chr6:28103259-28102900 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 75 | 
| Conread position: | 71-633 | 
| Cow position: | chr6:33465569-33466175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 610 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 410 | 
| Conread position: | 73-414 | 
| Cow position: | chr6:26325588-26325234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 81, 174 | 
| Conread position: | 75-400 | 
| Cow position: | chr6:14264445-14264794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 46, 248 | 
| Conread position: | 75-402 | 
| Cow position: | chr6:3685566-3685905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 77, 181 | 
| Conread position: | 75-408 | 
| Cow position: | chr6:51895471-51895127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 103 | 
| Conread position: | 75-608 | 
| Cow position: | chr6:24584762-24584187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 240 | 
| Conread position: | 75-633 | 
| Cow position: | chr6:13308776-13308179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 176 | 
| Conread position: | 75-634 | 
| Cow position: | chr6:40974795-40975402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 176 | 
| Conread position: | 75-672 | 
| Cow position: | chr6:41676547-41677184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 161 | 
| Conread position: | 76-331 | 
| Cow position: | chr6:16521312-16521046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 50, 17 | 
| Conread position: | 76-382 | 
| Cow position: | chr6:6162748-6163063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 30, 99 | 
| Conread position: | 76-391 | 
| Cow position: | chr6:67097918-67098257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 46, 157 | 
| Conread position: | 76-397 | 
| Cow position: | chr6:6205101-6205419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 23, 78 | 
| Conread position: | 76-400 | 
| Cow position: | chr6:13849685-13850023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 45, 177 | 
| Conread position: | 76-400 | 
| Cow position: | chr6:43620341-43620682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-403 | 
| Cow position: | chr6:34129067-34129412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 42, 102 | 
| Conread position: | 76-408 | 
| Cow position: | chr6:55901856-55902181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 42, 134 | 
| Conread position: | 76-409 | 
| Cow position: | chr6:7941173-7940830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 27, 228 | 
| Conread position: | 76-409 | 
| Cow position: | chr6:10634691-10635040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 26, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:328749-328395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 42, 184 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:7468041-7467685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:14928073-14928424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:16050680-16050325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:26772511-26772156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:27151830-27151476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:28160029-28160374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 42, 21 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:40277678-40278024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 78, 21 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:51867605-51867960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-414 | 
| Cow position: | chr6:52696250-52696601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 25, 20 | 
| Conread position: | 76-417 | 
| Cow position: | chr6:68029787-68030147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-421 | 
| Cow position: | chr6:39435311-39434942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 180 | 
| Conread position: | 76-546 | 
| Cow position: | chr6:44096443-44096953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 35, 254 | 
| Conread position: | 76-604 | 
| Cow position: | chr6:28001770-28001203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-610 | 
| Cow position: | chr6:37387192-37387772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 21 | 
| Conread position: | 76-610 | 
| Cow position: | chr6:50720708-50721290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 177 | 
| Conread position: | 76-618 | 
| Cow position: | chr6:26668414-26667822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-619 | 
| Cow position: | chr6:51732692-51733284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-634 | 
| Cow position: | chr6:2876421-2875816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-634 | 
| Cow position: | chr6:17595675-17595067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 175 | 
| Conread position: | 76-667 | 
| Cow position: | chr6:16704118-16703488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 251 | 
| Conread position: | 76-669 | 
| Cow position: | chr6:9734342-9733719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 36 | 
| Conread position: | 76-672 | 
| Cow position: | chr6:48875721-48875085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 175 | 
| Conread position: | 76-672 | 
| Cow position: | chr6:55473933-55474561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 132 | 
| Conread position: | 78-360 | 
| Cow position: | chr6:18963987-18963692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 74, 249 | 
| Conread position: | 78-388 | 
| Cow position: | chr6:65936026-65935713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 74, 27 | 
| Conread position: | 81-371 | 
| Cow position: | chr6:27527367-27527065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 15, 27 | 
| Conread position: | 81-656 | 
| Cow position: | chr6:11354552-11353940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 250 | 
| Conread position: | 82-414 | 
| Cow position: | chr6:36230905-36230561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 25 | 
| Conread position: | 82-618 | 
| Cow position: | chr6:50112705-50113254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 63 | 
| Conread position: | 85-414 | 
| Cow position: | chr6:1819178-1818834 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 164 | 
| Conread position: | 85-414 | 
| Cow position: | chr6:17048990-17049335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 247 | 
| Conread position: | 85-414 | 
| Cow position: | chr6:33490435-33490089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 33, 166 | 
| Conread position: | 85-612 | 
| Cow position: | chr6:12646856-12647424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 573 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 87 | 
| Conread position: | 85-612 | 
| Cow position: | chr6:39331911-39331335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 85-634 | 
| Cow position: | chr6:17121011-17121604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 14 | 
| Conread position: | 85-634 | 
| Cow position: | chr6:40158885-40158299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 592 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 153 | 
| Conread position: | 85-669 | 
| Cow position: | chr6:30270284-30269650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 166 | 
| Conread position: | 86-384 | 
| Cow position: | chr6:67212153-67211846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 66, 41 | 
| Conread position: | 86-409 | 
| Cow position: | chr6:52190332-52190023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 37, 71 | 
| Conread position: | 86-414 | 
| Cow position: | chr6:478171-478515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 32, 175 | 
| Conread position: | 86-634 | 
| Cow position: | chr6:51149562-51150160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 169 | 
| Conread position: | 88-298 | 
| Cow position: | chr6:13979385-13979613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-307 | 
| Cow position: | chr6:13367701-13367938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-309 | 
| Cow position: | chr6:23000764-23001003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 30, 179 | 
| Conread position: | 88-345 | 
| Cow position: | chr6:46296895-46297169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-347 | 
| Cow position: | chr6:50623921-50624187 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 25, 86 | 
| Conread position: | 88-350 | 
| Cow position: | chr6:617782-618057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 18, 238 | 
| Conread position: | 88-367 | 
| Cow position: | chr6:52194347-52194051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 211 | 
| Conread position: | 88-380 | 
| Cow position: | chr6:19769234-19769532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 30, 155 | 
| Conread position: | 88-386 | 
| Cow position: | chr6:47849288-47848985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 45, 159 | 
| Conread position: | 88-391 | 
| Cow position: | chr6:43330787-43330476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 18, 47 | 
| Conread position: | 88-396 | 
| Cow position: | chr6:225284-224966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 67 | 
| Conread position: | 88-396 | 
| Cow position: | chr6:28400628-28400304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 30, 53 | 
| Conread position: | 88-397 | 
| Cow position: | chr6:27475036-27475360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 30, 156 | 
| Conread position: | 88-400 | 
| Cow position: | chr6:1796045-1795717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 163 | 
| Conread position: | 88-400 | 
| Cow position: | chr6:3151841-3152169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 88-400 | 
| Cow position: | chr6:20351467-20351138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-400 | 
| Cow position: | chr6:61179592-61179278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 30, 213 | 
| Conread position: | 88-400 | 
| Cow position: | chr6:66189178-66188849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-402 | 
| Cow position: | chr6:23528562-23528872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 70, 122 | 
| Conread position: | 88-409 | 
| Cow position: | chr6:6159280-6159617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:127510-127167 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:1507885-1507545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 160 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:2377326-2377669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:10043837-10044180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:12971295-12970952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:14133121-14132778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:19104287-19103943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 147 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:19713608-19713269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 159 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:22679477-22679820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:22738075-22737742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 135 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:35967844-35967501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:45591171-45591513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:55238317-55238661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:56452473-56452130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:59618688-59619039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 244 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:60378785-60379128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:62664397-62664740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-414 | 
| Cow position: | chr6:65929873-65930210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 64, 19 | 
| Conread position: | 88-431 | 
| Cow position: | chr6:33810413-33810772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-475 | 
| Cow position: | chr6:65905672-65905270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 30, 167 | 
| Conread position: | 88-528 | 
| Cow position: | chr6:41389830-41389345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 247 | 
| Conread position: | 88-541 | 
| Cow position: | chr6:24624771-24624296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 86 | 
| Conread position: | 88-583 | 
| Cow position: | chr6:62577560-62577015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-604 | 
| Cow position: | chr6:16592591-16593148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 62 | 
| Conread position: | 88-618 | 
| Cow position: | chr6:11019279-11019859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 584 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 167 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:7138713-7138123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 33 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:20450590-20451178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:25375469-25374890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 160 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:35874089-35873511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 9 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:43186724-43187327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 244 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:44018206-44017610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 245 | 
| Conread position: | 88-634 | 
| Cow position: | chr6:65819960-65819364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 602 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 163 | 
| Conread position: | 88-649 | 
| Cow position: | chr6:60167927-60167325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 609 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 162 | 
| Conread position: | 88-654 | 
| Cow position: | chr6:2581040-2581639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 163 | 
| Conread position: | 88-654 | 
| Cow position: | chr6:15963267-15962683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 99 | 
| Conread position: | 88-669 | 
| Cow position: | chr6:916665-917295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 163 | 
| Conread position: | 88-669 | 
| Cow position: | chr6:2367610-2367010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 197 | 
| Conread position: | 89-409 | 
| Cow position: | chr6:35824475-35824801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 29, 63 | 
| Conread position: | 89-415 | 
| Cow position: | chr6:43798288-43797946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 29, 239 | 
| Conread position: | 89-613 | 
| Cow position: | chr6:182920-182344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 243 | 
| Conread position: | 89-619 | 
| Cow position: | chr6:10611451-10612030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 239 | 
| Conread position: | 89-631 | 
| Cow position: | chr6:8204803-8205403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 604 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 162 | 
| Conread position: | 89-634 | 
| Cow position: | chr6:64718944-64719536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 162 | 
| Conread position: | 89-652 | 
| Cow position: | chr6:3015489-3016078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 601 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 184 | 
| Conread position: | 89-657 | 
| Cow position: | chr6:15924966-15924354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 162 | 
| Conread position: | 89-669 | 
| Cow position: | chr6:3272856-3272230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 52 | 
| Conread position: | 90-400 | 
| Cow position: | chr6:12351453-12351779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 28, 170 | 
| Conread position: | 91-414 | 
| Cow position: | chr6:53936000-53935667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 27, 91 | 
| Conread position: | 91-417 | 
| Cow position: | chr6:50636915-50637255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 27, 237 | 
| Conread position: | 91-669 | 
| Cow position: | chr6:12628526-12629148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 224 | 
| Conread position: | 92-397 | 
| Cow position: | chr6:3927772-3928096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 26, 234 | 
| Conread position: | 94-672 | 
| Cow position: | chr6:15480224-15480824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 78 | 
| Conread position: | 95-556 | 
| Cow position: | chr6:6474808-6474308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 20, 233 | 
| Conread position: | 96-619 | 
| Cow position: | chr6:16674366-16674881 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 22, 237 | 
| Conread position: | 99-416 | 
| Cow position: | chr6:4904341-4904017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 19, 106 | 
| Conread position: | 101-672 | 
| Cow position: | chr6:28550437-28549799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 51, 16 | 
| Conread position: | 107-408 | 
| Cow position: | chr6:43790933-43790619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 45, 140 | 
| Conread position: | 109-409 | 
| Cow position: | chr6:66277083-66277399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 43, 8 | 
| Conread position: | 109-503 | 
| Cow position: | chr6:18496966-18497386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 43, 218 | 
| Conread position: | 115-654 | 
| Cow position: | chr6:9738604-9738016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 593 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 5 | 
| Conread position: | 117-414 | 
| Cow position: | chr6:64425150-64425465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 35, 159 | 
| Conread position: | 119-315 | 
| Cow position: | chr6:41264697-41264907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 33, 205 | 
| Conread position: | 119-400 | 
| Cow position: | chr6:21711218-21711512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 49, 128 | 
| Conread position: | 119-414 | 
| Cow position: | chr6:43087935-43087627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 35, 206 | 
| Conread position: | 119-618 | 
| Cow position: | chr6:28185673-28185117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 128 | 
| Conread position: | 120-414 | 
| Cow position: | chr6:53462494-53462190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 33, 204 | 
| Conread position: | 122-403 | 
| Cow position: | chr6:44147288-44146992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 32, 125 | 
| Conread position: | 125-307 | 
| Cow position: | chr6:30318102-30317907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 127 | 
| Conread position: | 130-669 | 
| Cow position: | chr6:6120311-6119737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 195 | 
| Conread position: | 133-414 | 
| Cow position: | chr6:27761376-27761667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 35, 187 | 
| Conread position: | 135-607 | 
| Cow position: | chr6:18751513-18751017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 17, 185 | 
| Conread position: | 137-414 | 
| Cow position: | chr6:31913499-31913210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 17, 6 | 
| Conread position: | 158-357 | 
| Cow position: | chr6:705567-705775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 17, 146 | 
| Conread position: | 160-634 | 
| Cow position: | chr6:27172534-27173047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 9 | 
| Conread position: | 161-561 | 
| Cow position: | chr6:1734898-1735310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 36, 8 | 
| Conread position: | 173-400 | 
| Cow position: | chr6:16418965-16418735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 63 | 
| Conread position: | 173-400 | 
| Cow position: | chr6:59504183-59504405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 26, 43 | 
| Conread position: | 173-409 | 
| Cow position: | chr6:26653637-26653862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 105, 30 | 
| Conread position: | 173-414 | 
| Cow position: | chr6:45975224-45975474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 30, 70 | 
| Conread position: | 173-608 | 
| Cow position: | chr6:39847630-39848110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 26, 69 | 
| Conread position: | 174-400 | 
| Cow position: | chr6:11829910-11829685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 55, 29 | 
| Conread position: | 174-634 | 
| Cow position: | chr6:50486058-50485566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 504 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 148 | 
| Conread position: | 176-669 | 
| Cow position: | chr6:35417223-35416722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 27 | 
| Conread position: | 178-612 | 
| Cow position: | chr6:15784252-15783785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 90 | 
| Conread position: | 185-400 | 
| Cow position: | chr6:888296-888508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 11, 7 | 
| Conread position: | 187-409 | 
| Cow position: | chr6:14498206-14497990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 52, 13 | 
| Conread position: | 187-414 | 
| Cow position: | chr6:1888695-1888472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 82, 27 | 
| Conread position: | 189-397 | 
| Cow position: | chr6:65049918-65049711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 44, 25 | 
| Conread position: | 194-400 | 
| Cow position: | chr6:34074606-34074819 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 48, 20 | 
| Conread position: | 194-400 | 
| Cow position: | chr6:44950713-44950509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 22, 7 | 
| Conread position: | 194-413 | 
| Cow position: | chr6:11168253-11168470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 194-537 | 
| Cow position: | chr6:55386016-55386378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 44, 20 | 
| Conread position: | 194-609 | 
| Cow position: | chr6:365638-366078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 20 | 
| Conread position: | 194-619 | 
| Cow position: | chr6:20553494-20553038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 461 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 44, 20 | 
| Conread position: | 201-400 | 
| Cow position: | chr6:11289701-11289505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 41, 13 | 
| Conread position: | 201-549 | 
| Cow position: | chr6:39359428-39359067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 68, 89 | 
| Conread position: | 202-375 | 
| Cow position: | chr6:47573538-47573709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 66, 12 | 
| Conread position: | 202-668 | 
| Cow position: | chr6:47380433-47380918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 12 | 
| Conread position: | 207-395 | 
| Cow position: | chr6:13404794-13404979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 62, 29 | 
| Conread position: | 208-400 | 
| Cow position: | chr6:66838889-66839081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 31, 19 | 
| Conread position: | 209-402 | 
| Cow position: | chr6:66548238-66548427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 35, 25 | 
| Conread position: | 210-400 | 
| Cow position: | chr6:31010048-31009857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 27, 101 | 
| Conread position: | 210-414 | 
| Cow position: | chr6:25217718-25217919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 32, 28 | 
| Conread position: | 210-672 | 
| Cow position: | chr6:10651024-10650539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 13 | 
| Conread position: | 211-414 | 
| Cow position: | chr6:45724383-45724180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 31, 23 | 
| Conread position: | 211-650 | 
| Cow position: | chr6:33950387-33949927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 81 | 
| Conread position: | 213-409 | 
| Cow position: | chr6:28475823-28476019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 26, 83 | 
| Conread position: | 213-657 | 
| Cow position: | chr6:59596026-59596482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 52, 99 | 
| Conread position: | 216-619 | 
| Cow position: | chr6:3119776-3119340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 29, 77 | 
| Conread position: | 220-669 | 
| Cow position: | chr6:14851976-14851495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 94 | 
| Conread position: | 224-414 | 
| Cow position: | chr6:38932479-38932289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 18, 10 | 
| Conread position: | 226-414 | 
| Cow position: | chr6:49826476-49826287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 16, 87 | 
| Conread position: | 228-417 | 
| Cow position: | chr6:46947599-46947787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 14, 6 | 
| Conread position: | 229-414 | 
| Cow position: | chr6:9586845-9587030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 13, 5 | 
| Conread position: | 234-400 | 
| Cow position: | chr6:68871123-68871290 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 8, 79 | 
| Conread position: | 234-409 | 
| Cow position: | chr6:42615885-42616057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 75, 0 | 
| Conread position: | 234-414 | 
| Cow position: | chr6:23880568-23880389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 8, 79 | 
| Conread position: | 234-414 | 
| Cow position: | chr6:49165815-49165637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 8, 59 | 
| Conread position: | 236-384 | 
| Cow position: | chr6:11639436-11639287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 17, 77 | 
| Conread position: | 240-414 | 
| Cow position: | chr6:18520288-18520117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 27, 10 | 
| Conread position: | 242-609 | 
| Cow position: | chr6:35883365-35883765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 73 | 
| Conread position: | 245-400 | 
| Cow position: | chr6:38672031-38672184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 70, 0 | 
| Conread position: | 247-660 | 
| Cow position: | chr6:52241000-52240585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 25, 45 | 
| Conread position: | 251-414 | 
| Cow position: | chr6:57181623-57181785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 37, 41 | 
| Conread position: | 252-400 | 
| Cow position: | chr6:61829032-61829180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 15, 60 | 
| Conread position: | 252-414 | 
| Cow position: | chr6:15276436-15276274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 17, 60 | 
| Conread position: | 252-414 | 
| Cow position: | chr6:65875478-65875317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 17, 60 | 
| Conread position: | 252-634 | 
| Cow position: | chr6:41414539-41414127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 17, 62 | 
| Conread position: | 252-634 | 
| Cow position: | chr6:45480273-45479870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 60 | 
| Conread position: | 252-634 | 
| Cow position: | chr6:53543675-53543265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 252-669 | 
| Cow position: | chr6:40550895-40550448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 60 | 
| Conread position: | 253-669 | 
| Cow position: | chr6:50121123-50120675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 59 | 
| Conread position: | 255-652 | 
| Cow position: | chr6:52899757-52900182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 16, 59 | 
| Conread position: | 257-402 | 
| Cow position: | chr6:24632434-24632294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 108, 17 | 
| Conread position: | 258-414 | 
| Cow position: | chr6:55592865-55593020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 9, 54 | 
| Conread position: | 258-618 | 
| Cow position: | chr6:1402719-1402355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 11, 54 | 
| Conread position: | 258-618 | 
| Cow position: | chr6:1407307-1406943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 11, 54 | 
| Conread position: | 260-596 | 
| Cow position: | chr6:1380643-1380279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 12, 32 | 
| Conread position: | 264-405 | 
| Cow position: | chr6:237059-236919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 268-400 | 
| Cow position: | chr6:3573617-3573747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 31, 21 | 
| Conread position: | 268-414 | 
| Cow position: | chr6:60332163-60332308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 268-619 | 
| Cow position: | chr6:530060-529686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 115, 43 | 
| Conread position: | 269-571 | 
| Cow position: | chr6:44509887-44510217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 122, 22 | 
| Conread position: | 270-655 | 
| Cow position: | chr6:13696323-13695932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 132, 43 | 
| Conread position: | 270-672 | 
| Cow position: | chr6:45279789-45280192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 21 | 
| Conread position: | 273-414 | 
| Cow position: | chr6:6556786-6556926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 274-413 | 
| Cow position: | chr6:42135942-42135804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 274-657 | 
| Cow position: | chr6:58605356-58605769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 25, 37 | 
| Conread position: | 275-414 | 
| Cow position: | chr6:9234339-9234477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 275-609 | 
| Cow position: | chr6:31150318-31150659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 14, 25 | 
| Conread position: | 280-414 | 
| Cow position: | chr6:22044176-22044043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 284-414 | 
| Cow position: | chr6:1262718-1262847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 288-414 | 
| Cow position: | chr6:2641387-2641512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 291-672 | 
| Cow position: | chr6:30317098-30316686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 22 | 
| Conread position: | 294-634 | 
| Cow position: | chr6:58030626-58030995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 17 | 
| Conread position: | 295-592 | 
| Cow position: | chr6:17927271-17927599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 81, 16 | 
| Conread position: | 313-664 | 
| Cow position: | chr6:64887843-64888205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 89, 225 | 
| Conread position: | 319-610 | 
| Cow position: | chr6:33470176-33470472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 73, 43 | 
| Conread position: | 324-655 | 
| Cow position: | chr6:1498076-1498437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 13, 8 | 
| Conread position: | 329-658 | 
| Cow position: | chr6:44494108-44494448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 89, 10 | 
| Conread position: | 348-657 | 
| Cow position: | chr6:705905-706239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 356-654 | 
| Cow position: | chr6:2087455-2087762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 62, 12 | 
| Conread position: | 357-612 | 
| Cow position: | chr6:1380331-1380076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 29, 8 | 
| Conread position: | 366-634 | 
| Cow position: | chr6:33809491-33809216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 5, 53 | 
| Conread position: | 397-650 | 
| Cow position: | chr6:6187507-6187755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 90, 45 | 
| Conread position: | 397-657 | 
| Cow position: | chr6:21832687-21832420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 26, 135 | 
| Conread position: | 398-656 | 
| Cow position: | chr6:27534830-27534563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 399-654 | 
| Cow position: | chr6:29085400-29085138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 231 | 
| Conread position: | 399-672 | 
| Cow position: | chr6:32427135-32427406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 26, 50 | 
| Conread position: | 401-612 | 
| Cow position: | chr6:24242268-24242485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 401-619 | 
| Cow position: | chr6:34493652-34493878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 401-619 | 
| Cow position: | chr6:34504544-34504318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 401-649 | 
| Cow position: | chr6:2186805-2186549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 406-634 | 
| Cow position: | chr6:6034813-6034579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 53, 15 | 
| Conread position: | 414-634 | 
| Cow position: | chr6:32286542-32286772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 420-609 | 
| Cow position: | chr6:39912322-39912517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 39, 85 | 
| Conread position: | 420-634 | 
| Cow position: | chr6:452266-452045 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 421-568 | 
| Cow position: | chr6:27761700-27761854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 155 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-575 | 
| Cow position: | chr6:12351830-12351991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-607 | 
| Cow position: | chr6:34129455-34129648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-607 | 
| Cow position: | chr6:43039069-43038876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-607 | 
| Cow position: | chr6:66188802-66188609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-609 | 
| Cow position: | chr6:843830-843635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-613 | 
| Cow position: | chr6:11722198-11722011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 64, 30 | 
| Conread position: | 421-613 | 
| Cow position: | chr6:18520084-18519885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-613 | 
| Cow position: | chr6:43049197-43048998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-613 | 
| Cow position: | chr6:62001342-62001145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 22, 15 | 
| Conread position: | 421-618 | 
| Cow position: | chr6:9234510-9234713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 38, 162 | 
| Conread position: | 421-618 | 
| Cow position: | chr6:22044010-22043806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-618 | 
| Cow position: | chr6:28064989-28065193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-618 | 
| Cow position: | chr6:45937296-45937493 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 38, 117 | 
| Conread position: | 421-619 | 
| Cow position: | chr6:1105152-1104949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 38, 179 | 
| Conread position: | 421-619 | 
| Cow position: | chr6:1796625-1796830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 421-619 | 
| Cow position: | chr6:12926571-12926776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 38, 110 | 
| Conread position: | 421-626 | 
| Cow position: | chr6:49165604-49165392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 421-627 | 
| Cow position: | chr6:2089281-2089487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 38, 140 | 
| Conread position: | 421-631 | 
| Cow position: | chr6:21711702-21711921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 421-631 | 
| Cow position: | chr6:47040211-47039994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:328362-328145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 64, 47 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:478548-478768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:888555-888775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:1507512-1507292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:3152216-3152436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:6182710-6182490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:6556959-6557179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:6569220-6569013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 38, 94 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:7467652-7467432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:11453870-11453650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:11869936-11869716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:12997419-12997639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:13850736-13850956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:16050292-16050075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 64, 187 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:17112167-17111947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:17386521-17386741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:19103910-19103690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:19713236-19713016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:23880058-23879838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:26325201-26324982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 38, 201 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:26772123-26771903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:28481335-28481548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 38, 101 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:31913177-31912957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:31940865-31941085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:32419947-32420168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 38, 200 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:33490056-33489836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:36230528-36230308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:38932256-38932036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:39897948-39898168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:40813363-40813583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:41231486-41231706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:44146949-44146729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:46947817-46948036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:49826254-49826034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:55238694-55238908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 38, 141 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:56452097-56451877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:57521173-57521393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:60332341-60332561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:60379161-60379381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:60876298-60876514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 33, 124 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:61829227-61829447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:63177041-63177261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:67173553-67173773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:67448928-67448708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-634 | 
| Cow position: | chr6:68030177-68030397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-654 | 
| Cow position: | chr6:3573794-3574030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 64, 43 | 
| Conread position: | 421-657 | 
| Cow position: | chr6:5946777-5946534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 421-657 | 
| Cow position: | chr6:15276242-15275999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 38, 110 | 
| Conread position: | 421-657 | 
| Cow position: | chr6:55042125-55041888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 38, 200 | 
| Conread position: | 421-669 | 
| Cow position: | chr6:17049368-17049625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 31, 248 | 
| Conread position: | 421-669 | 
| Cow position: | chr6:25357863-25357609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 35, 245 | 
| Conread position: | 421-669 | 
| Cow position: | chr6:58016354-58016601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 38, 108 | 
| Conread position: | 421-672 | 
| Cow position: | chr6:8536297-8536040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 38, 80 | 
| Conread position: | 422-575 | 
| Cow position: | chr6:59710729-59710889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 422-613 | 
| Cow position: | chr6:14305623-14305821 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 422-633 | 
| Cow position: | chr6:40278058-40278276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 422-634 | 
| Cow position: | chr6:22737708-22737488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 422-634 | 
| Cow position: | chr6:27151442-27151223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 422-653 | 
| Cow position: | chr6:58880214-58880443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 34, 9 | 
| Conread position: | 422-668 | 
| Cow position: | chr6:7105530-7105281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 7, 201 | 
| Conread position: | 424-633 | 
| Cow position: | chr6:47025040-47025254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 424-634 | 
| Cow position: | chr6:28476072-28476288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 35, 155 | 
| Conread position: | 424-654 | 
| Cow position: | chr6:42616099-42616335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 35, 120 | 
| Conread position: | 424-657 | 
| Cow position: | chr6:14950651-14950411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 242 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 35, 15 | 
| Conread position: | 424-658 | 
| Cow position: | chr6:30077281-30077042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 35, 95 | 
| Conread position: | 427-609 | 
| Cow position: | chr6:55945421-55945233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 427-672 | 
| Cow position: | chr6:63405816-63406059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 27, 83 | 
| Conread position: | 428-621 | 
| Cow position: | chr6:49732802-49732998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 28, 110 | 
| Conread position: | 428-627 | 
| Cow position: | chr6:49761468-49761681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 428-630 | 
| Cow position: | chr6:58952116-58951910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 29, 75 | 
| Conread position: | 428-633 | 
| Cow position: | chr6:11168510-11168724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 34, 0 | 
| Conread position: | 428-633 | 
| Cow position: | chr6:58072665-58072873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 428-654 | 
| Cow position: | chr6:13405233-13405467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 428-655 | 
| Cow position: | chr6:17556667-17556433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 31, 103 | 
| Conread position: | 428-655 | 
| Cow position: | chr6:35600684-35600918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 34, 103 | 
| Conread position: | 428-657 | 
| Cow position: | chr6:16766835-16766599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 428-660 | 
| Cow position: | chr6:65892864-65892629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 31, 127 | 
| Conread position: | 428-668 | 
| Cow position: | chr6:52978154-52977907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 31, 239 | 
| Conread position: | 428-668 | 
| Cow position: | chr6:59619079-59619327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 29, 231 | 
| Conread position: | 428-669 | 
| Cow position: | chr6:2618558-2618314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 57, 36 | 
| Conread position: | 428-672 | 
| Cow position: | chr6:14290490-14290255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 30, 82 | 
| Conread position: | 428-672 | 
| Cow position: | chr6:18150280-18150035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 59, 14 | 
| Conread position: | 428-672 | 
| Cow position: | chr6:22930645-22930397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 59, 36 | 
| Conread position: | 428-672 | 
| Cow position: | chr6:34237082-34236840 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 29, 13 | 
| Conread position: | 429-612 | 
| Cow position: | chr6:5130447-5130257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 429-613 | 
| Cow position: | chr6:27475418-27475608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 429-613 | 
| Cow position: | chr6:43087586-43087399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 30, 98 | 
| Conread position: | 429-618 | 
| Cow position: | chr6:21857359-21857163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 429-618 | 
| Cow position: | chr6:67553239-67553434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 30, 11 | 
| Conread position: | 429-653 | 
| Cow position: | chr6:47848899-47848671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 34, 12 | 
| Conread position: | 429-653 | 
| Cow position: | chr6:52189976-52189751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 14, 7 | 
| Conread position: | 429-655 | 
| Cow position: | chr6:9840123-9839897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 33, 114 | 
| Conread position: | 429-655 | 
| Cow position: | chr6:11193577-11193348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 429-655 | 
| Cow position: | chr6:14897190-14897417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 22, 212 | 
| Conread position: | 429-656 | 
| Cow position: | chr6:34074874-34075104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 235 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 30, 192 | 
| Conread position: | 429-657 | 
| Cow position: | chr6:42266745-42266974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 30, 125 | 
| Conread position: | 429-657 | 
| Cow position: | chr6:43790572-43790335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 430-584 | 
| Cow position: | chr6:63704632-63704470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 430-618 | 
| Cow position: | chr6:127125-126930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 430-634 | 
| Cow position: | chr6:23568586-23568375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 430-651 | 
| Cow position: | chr6:4680599-4680825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 9e-38 | 
| Alignm gaps (pig, cow): | 27, 170 | 
| Conread position: | 430-654 | 
| Cow position: | chr6:18970428-18970202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 32, 146 | 
| Conread position: | 430-655 | 
| Cow position: | chr6:10570889-10570649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 31, 201 | 
| Conread position: | 430-662 | 
| Cow position: | chr6:67211581-67211344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 29, 192 | 
| Conread position: | 430-672 | 
| Cow position: | chr6:618423-618667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 18, 9 | 
| Conread position: | 431-596 | 
| Cow position: | chr6:16699214-16699386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 431-618 | 
| Cow position: | chr6:28171919-28172113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 431-634 | 
| Cow position: | chr6:22805833-22805628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 19, 97 | 
| Conread position: | 431-652 | 
| Cow position: | chr6:15181174-15181391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 28, 82 | 
| Conread position: | 431-653 | 
| Cow position: | chr6:43330410-43330181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 26, 14 | 
| Conread position: | 431-653 | 
| Cow position: | chr6:52245517-52245745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 28, 181 | 
| Conread position: | 431-655 | 
| Cow position: | chr6:8634296-8634066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 431-655 | 
| Cow position: | chr6:38438614-38438845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 431-656 | 
| Cow position: | chr6:41531588-41531830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 431-656 | 
| Cow position: | chr6:49625841-49626070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 28, 73 | 
| Conread position: | 431-657 | 
| Cow position: | chr6:39957084-39957310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 27, 133 | 
| Conread position: | 431-662 | 
| Cow position: | chr6:41556343-41556575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 56, 42 | 
| Conread position: | 431-668 | 
| Cow position: | chr6:24632239-24631996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 52, 108 | 
| Conread position: | 431-669 | 
| Cow position: | chr6:6595431-6595677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 431-669 | 
| Cow position: | chr6:64425800-64426043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 26, 170 | 
| Conread position: | 431-672 | 
| Cow position: | chr6:12534735-12534979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 13, 114 | 
| Conread position: | 432-669 | 
| Cow position: | chr6:50113693-50113930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 27, 160 | 
| Conread position: | 433-618 | 
| Cow position: | chr6:34017999-34017807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 26, 172 | 
| Conread position: | 433-660 | 
| Cow position: | chr6:44950450-44950215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 26, 96 | 
| Conread position: | 434-609 | 
| Cow position: | chr6:57302622-57302802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 435-657 | 
| Cow position: | chr6:57856781-57857011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 439-648 | 
| Cow position: | chr6:18571563-18571352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 7, 62 | 
| Conread position: | 440-634 | 
| Cow position: | chr6:2452864-2453064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 19, 38 | 
| Conread position: | 440-634 | 
| Cow position: | chr6:27526946-27526745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 440-672 | 
| Cow position: | chr6:46218706-46218947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 18, 229 | 
| Conread position: | 441-609 | 
| Cow position: | chr6:66750768-66750939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 17, 7 | 
| Conread position: | 441-628 | 
| Cow position: | chr6:47154431-47154625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 441-634 | 
| Cow position: | chr6:11289441-11289248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 49, 23 | 
| Conread position: | 441-660 | 
| Cow position: | chr6:26654132-26654353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 18, 72 | 
| Conread position: | 442-634 | 
| Cow position: | chr6:46633140-46633337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 442-662 | 
| Cow position: | chr6:53672357-53672582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 17, 80 | 
| Conread position: | 442-669 | 
| Cow position: | chr6:224489-224252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 17, 137 | 
| Conread position: | 448-672 | 
| Cow position: | chr6:33983841-33984070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 232 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 11, 209 | 
| Conread position: | 449-612 | 
| Cow position: | chr6:23000221-23000393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 36, 137 | 
| Conread position: | 455-581 | 
| Cow position: | chr6:45736809-45736678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 30, 0 | 
| Conread position: | 455-634 | 
| Cow position: | chr6:29283305-29283490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 32, 0 | 
| Conread position: | 455-654 | 
| Cow position: | chr6:6163172-6163369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 35, 59 | 
| Conread position: | 456-672 | 
| Cow position: | chr6:13591349-13591567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 31, 20 | 
| Conread position: | 457-619 | 
| Cow position: | chr6:1834030-1834198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 10, 73 | 
| Conread position: | 457-634 | 
| Cow position: | chr6:46764366-46764184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 457-655 | 
| Cow position: | chr6:62326310-62326513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 28, 0 | 
| Conread position: | 458-613 | 
| Cow position: | chr6:18987180-18987337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 27, 71 | 
| Conread position: | 462-619 | 
| Cow position: | chr6:28113010-28112853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 97, 27 | 
| Conread position: | 462-634 | 
| Cow position: | chr6:34405342-34405519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 462-669 | 
| Cow position: | chr6:11639158-11638954 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 23, 124 | 
| Conread position: | 466-654 | 
| Cow position: | chr6:6205725-6205917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 19, 107 | 
| Conread position: | 472-618 | 
| Cow position: | chr6:49963898-49963750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 475-655 | 
| Cow position: | chr6:18497381-18497562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 479-634 | 
| Cow position: | chr6:10598065-10598222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 485-621 | 
| Cow position: | chr6:38988743-38988607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 486-602 | 
| Cow position: | chr6:54887783-54887666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 486-634 | 
| Cow position: | chr6:16644965-16645114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 486-634 | 
| Cow position: | chr6:18803989-18803841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 73, 62 | 
| Conread position: | 486-634 | 
| Cow position: | chr6:27939103-27939252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 486-634 | 
| Cow position: | chr6:53537144-53537294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 486-652 | 
| Cow position: | chr6:24624069-24623904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 69, 99 | 
| Conread position: | 486-655 | 
| Cow position: | chr6:16410129-16410295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 73, 24 | 
| Conread position: | 486-655 | 
| Cow position: | chr6:43585416-43585246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 486-657 | 
| Cow position: | chr6:13314960-13314789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 69, 91 | 
| Conread position: | 486-668 | 
| Cow position: | chr6:12090898-12090721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 73, 114 | 
| Conread position: | 486-668 | 
| Cow position: | chr6:35704452-35704266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 69, 150 | 
| Conread position: | 486-669 | 
| Cow position: | chr6:4274138-4274322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 17, 166 | 
| Conread position: | 486-669 | 
| Cow position: | chr6:6944870-6944691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 487-654 | 
| Cow position: | chr6:25180112-25179944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 490-634 | 
| Cow position: | chr6:19718658-19718803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 490-655 | 
| Cow position: | chr6:27365252-27365414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 130, 36 | 
| Conread position: | 494-634 | 
| Cow position: | chr6:21163380-21163521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 494-634 | 
| Cow position: | chr6:33996824-33996965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 494-653 | 
| Cow position: | chr6:58595328-58595169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 65, 5 | 
| Conread position: | 501-672 | 
| Cow position: | chr6:66549714-66549884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 149, 0 | 
| Conread position: | 504-618 | 
| Cow position: | chr6:9587622-9587737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 505-634 | 
| Cow position: | chr6:28399684-28399554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 507-662 | 
| Cow position: | chr6:61179619-61179774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 511-672 | 
| Cow position: | chr6:33896548-33896385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 12, 142 | 
| Conread position: | 521-672 | 
| Cow position: | chr6:48947551-48947402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 532-672 | 
| Cow position: | chr6:45792849-45792990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 92, 120 | 
Show alignments to all cow chromosomes.
