Cow genome map

Conread name: Ss1.1-Pig4-TMW8003A18.5

Conread position: 9-414
Cow position: chr6:45936839-45937263 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 57

Conread position: 53-398
Cow position: chr6:39956653-39957013 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 53

Conread position: 55-663
Cow position: chr6:37385745-37386391 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 14

Conread position: 56-388
Cow position: chr6:15031264-15030917 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 13

Conread position: 62-414
Cow position: chr6:42266328-42266704 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 257
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 276

Conread position: 62-613
Cow position: chr6:40864437-40863832 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 268

Conread position: 62-619
Cow position: chr6:36530879-36531477 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 190

Conread position: 62-634
Cow position: chr6:1536302-1536923 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 194

Conread position: 62-634
Cow position: chr6:55539677-55539053 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 193

Conread position: 62-669
Cow position: chr6:41408000-41408656 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 191

Conread position: 63-414
Cow position: chr6:67266868-67267229 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 55, 19

Conread position: 63-417
Cow position: chr6:16767241-16766872 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 263
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 8, 268

Conread position: 63-662
Cow position: chr6:16595598-16596228 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 278

Conread position: 64-400
Cow position: chr6:11870335-11869983 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 257
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 189

Conread position: 66-351
Cow position: chr6:28135532-28135836 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 221
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 187

Conread position: 66-414
Cow position: chr6:1275385-1275024 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 251
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 242

Conread position: 66-414
Cow position: chr6:28064588-28064956 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 188

Conread position: 66-414
Cow position: chr6:34018011-34018378 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 187

Conread position: 66-416
Cow position: chr6:39911924-39912292 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 86

Conread position: 66-618
Cow position: chr6:12663715-12663113 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 185

Conread position: 66-634
Cow position: chr6:28488967-28488360 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 187

Conread position: 66-634
Cow position: chr6:50570800-50571409 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 196

Conread position: 67-380
Cow position: chr6:6165258-6165574 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 232
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 10, 38

Conread position: 68-669
Cow position: chr6:10235809-10236448 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 35

Conread position: 70-380
Cow position: chr6:1053831-1053504 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 16, 81

Conread position: 70-400
Cow position: chr6:8756215-8755866 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 183

Conread position: 70-400
Cow position: chr6:58952518-58952170 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 238
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 260

Conread position: 70-408
Cow position: chr6:24241893-24242250 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 183

Conread position: 70-408
Cow position: chr6:28171509-28171863 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 255

Conread position: 70-408
Cow position: chr6:51876432-51876783 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 98

Conread position: 70-414
Cow position: chr6:4467213-4467576 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 29

Conread position: 70-414
Cow position: chr6:5947173-5946811 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 261

Conread position: 70-414
Cow position: chr6:8536691-8536330 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 181

Conread position: 70-414
Cow position: chr6:11722592-11722231 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 260

Conread position: 70-414
Cow position: chr6:34504919-34504556 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 17, 82

Conread position: 70-414
Cow position: chr6:41231091-41231452 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 125

Conread position: 70-414
Cow position: chr6:43778128-43778484 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 70-415
Cow position: chr6:38989193-38988844 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 16, 53

Conread position: 70-418
Cow position: chr6:60875900-60876269 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 184

Conread position: 70-612
Cow position: chr6:25791096-25790503 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 80

Conread position: 70-612
Cow position: chr6:39999854-39999261 (view UCSC Genome Browser custom track)
Alignm length: 597
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 183

Conread position: 70-619
Cow position: chr6:21975555-21976154 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 183

Conread position: 70-619
Cow position: chr6:34844110-34843510 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 183

Conread position: 70-619
Cow position: chr6:41191927-41192529 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 70-634
Cow position: chr6:48970-48354 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 229

Conread position: 70-634
Cow position: chr6:3485796-3485201 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 183

Conread position: 70-634
Cow position: chr6:3886904-3886287 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 182

Conread position: 70-634
Cow position: chr6:15138564-15137955 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 261

Conread position: 70-634
Cow position: chr6:38874056-38873443 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 69

Conread position: 70-634
Cow position: chr6:51717148-51717773 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 187

Conread position: 70-655
Cow position: chr6:12514122-12514730 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 172

Conread position: 70-656
Cow position: chr6:6720590-6721210 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 49

Conread position: 70-656
Cow position: chr6:16624420-16625014 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 394
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 219

Conread position: 71-400
Cow position: chr6:65867392-65867737 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 260

Conread position: 71-414
Cow position: chr6:10267482-10267127 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 253
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 5, 52

Conread position: 71-414
Cow position: chr6:28103259-28102900 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 75

Conread position: 71-633
Cow position: chr6:33465569-33466175 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 410

Conread position: 73-414
Cow position: chr6:26325588-26325234 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 222
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 174

Conread position: 75-400
Cow position: chr6:14264445-14264794 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 46, 248

Conread position: 75-402
Cow position: chr6:3685566-3685905 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 238
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 77, 181

Conread position: 75-408
Cow position: chr6:51895471-51895127 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 103

Conread position: 75-608
Cow position: chr6:24584762-24584187 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 240

Conread position: 75-633
Cow position: chr6:13308776-13308179 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 75-634
Cow position: chr6:40974795-40975402 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 176

Conread position: 75-672
Cow position: chr6:41676547-41677184 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 76-331
Cow position: chr6:16521312-16521046 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 17

Conread position: 76-382
Cow position: chr6:6162748-6163063 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 30, 99

Conread position: 76-391
Cow position: chr6:67097918-67098257 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 157

Conread position: 76-397
Cow position: chr6:6205101-6205419 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 78

Conread position: 76-400
Cow position: chr6:13849685-13850023 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 242
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 177

Conread position: 76-400
Cow position: chr6:43620341-43620682 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-403
Cow position: chr6:34129067-34129412 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 102

Conread position: 76-408
Cow position: chr6:55901856-55902181 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 134

Conread position: 76-409
Cow position: chr6:7941173-7940830 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 233
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 228

Conread position: 76-409
Cow position: chr6:10634691-10635040 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 238
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 175

Conread position: 76-414
Cow position: chr6:328749-328395 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 184

Conread position: 76-414
Cow position: chr6:7468041-7467685 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-414
Cow position: chr6:14928073-14928424 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 175

Conread position: 76-414
Cow position: chr6:16050680-16050325 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-414
Cow position: chr6:26772511-26772156 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-414
Cow position: chr6:27151830-27151476 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 42, 175

Conread position: 76-414
Cow position: chr6:28160029-28160374 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 249
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 21

Conread position: 76-414
Cow position: chr6:40277678-40278024 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 244
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 21

Conread position: 76-414
Cow position: chr6:51867605-51867960 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-414
Cow position: chr6:52696250-52696601 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 20

Conread position: 76-417
Cow position: chr6:68029787-68030147 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-421
Cow position: chr6:39435311-39434942 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 180

Conread position: 76-546
Cow position: chr6:44096443-44096953 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 325
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 254

Conread position: 76-604
Cow position: chr6:28001770-28001203 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-610
Cow position: chr6:37387192-37387772 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 21

Conread position: 76-610
Cow position: chr6:50720708-50721290 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 177

Conread position: 76-618
Cow position: chr6:26668414-26667822 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-619
Cow position: chr6:51732692-51733284 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-634
Cow position: chr6:2876421-2875816 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-634
Cow position: chr6:17595675-17595067 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 76-667
Cow position: chr6:16704118-16703488 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 251

Conread position: 76-669
Cow position: chr6:9734342-9733719 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 36

Conread position: 76-672
Cow position: chr6:48875721-48875085 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 175

Conread position: 76-672
Cow position: chr6:55473933-55474561 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 132

Conread position: 78-360
Cow position: chr6:18963987-18963692 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 249

Conread position: 78-388
Cow position: chr6:65936026-65935713 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 74, 27

Conread position: 81-371
Cow position: chr6:27527367-27527065 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 219
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 27

Conread position: 81-656
Cow position: chr6:11354552-11353940 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 250

Conread position: 82-414
Cow position: chr6:36230905-36230561 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 82-618
Cow position: chr6:50112705-50113254 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 85-414
Cow position: chr6:1819178-1818834 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 164

Conread position: 85-414
Cow position: chr6:17048990-17049335 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 247

Conread position: 85-414
Cow position: chr6:33490435-33490089 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 248
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 33, 166

Conread position: 85-612
Cow position: chr6:12646856-12647424 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 85-612
Cow position: chr6:39331911-39331335 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 85-634
Cow position: chr6:17121011-17121604 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 14

Conread position: 85-634
Cow position: chr6:40158885-40158299 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 153

Conread position: 85-669
Cow position: chr6:30270284-30269650 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 166

Conread position: 86-384
Cow position: chr6:67212153-67211846 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 230
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 66, 41

Conread position: 86-409
Cow position: chr6:52190332-52190023 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 37, 71

Conread position: 86-414
Cow position: chr6:478171-478515 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 32, 175

Conread position: 86-634
Cow position: chr6:51149562-51150160 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 169

Conread position: 88-298
Cow position: chr6:13979385-13979613 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 163

Conread position: 88-307
Cow position: chr6:13367701-13367938 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 163

Conread position: 88-309
Cow position: chr6:23000764-23001003 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 30, 179

Conread position: 88-345
Cow position: chr6:46296895-46297169 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 30, 163

Conread position: 88-347
Cow position: chr6:50623921-50624187 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 86

Conread position: 88-350
Cow position: chr6:617782-618057 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 18, 238

Conread position: 88-367
Cow position: chr6:52194347-52194051 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 211

Conread position: 88-380
Cow position: chr6:19769234-19769532 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 155

Conread position: 88-386
Cow position: chr6:47849288-47848985 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 45, 159

Conread position: 88-391
Cow position: chr6:43330787-43330476 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 47

Conread position: 88-396
Cow position: chr6:225284-224966 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 67

Conread position: 88-396
Cow position: chr6:28400628-28400304 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 53

Conread position: 88-397
Cow position: chr6:27475036-27475360 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 30, 156

Conread position: 88-400
Cow position: chr6:1796045-1795717 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 163

Conread position: 88-400
Cow position: chr6:3151841-3152169 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 30, 162

Conread position: 88-400
Cow position: chr6:20351467-20351138 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-400
Cow position: chr6:61179592-61179278 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 213

Conread position: 88-400
Cow position: chr6:66189178-66188849 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 30, 163

Conread position: 88-402
Cow position: chr6:23528562-23528872 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 122

Conread position: 88-409
Cow position: chr6:6159280-6159617 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 163

Conread position: 88-414
Cow position: chr6:127510-127167 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:1507885-1507545 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 160

Conread position: 88-414
Cow position: chr6:2377326-2377669 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:10043837-10044180 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:12971295-12970952 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:14133121-14132778 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:19104287-19103943 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 147

Conread position: 88-414
Cow position: chr6:19713608-19713269 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 159

Conread position: 88-414
Cow position: chr6:22679477-22679820 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:22738075-22737742 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 135

Conread position: 88-414
Cow position: chr6:35967844-35967501 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:45591171-45591513 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 162

Conread position: 88-414
Cow position: chr6:55238317-55238661 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 163

Conread position: 88-414
Cow position: chr6:56452473-56452130 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:59618688-59619039 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 244

Conread position: 88-414
Cow position: chr6:60378785-60379128 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:62664397-62664740 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-414
Cow position: chr6:65929873-65930210 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 64, 19

Conread position: 88-431
Cow position: chr6:33810413-33810772 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 256
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 30, 163

Conread position: 88-475
Cow position: chr6:65905672-65905270 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 281
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 30, 167

Conread position: 88-528
Cow position: chr6:41389830-41389345 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 247

Conread position: 88-541
Cow position: chr6:24624771-24624296 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 86

Conread position: 88-583
Cow position: chr6:62577560-62577015 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-604
Cow position: chr6:16592591-16593148 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 62

Conread position: 88-618
Cow position: chr6:11019279-11019859 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 167

Conread position: 88-634
Cow position: chr6:7138713-7138123 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 33

Conread position: 88-634
Cow position: chr6:20450590-20451178 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-634
Cow position: chr6:25375469-25374890 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 160

Conread position: 88-634
Cow position: chr6:35874089-35873511 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 9

Conread position: 88-634
Cow position: chr6:43186724-43187327 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 244

Conread position: 88-634
Cow position: chr6:44018206-44017610 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 245

Conread position: 88-634
Cow position: chr6:65819960-65819364 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 163

Conread position: 88-649
Cow position: chr6:60167927-60167325 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 162

Conread position: 88-654
Cow position: chr6:2581040-2581639 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 163

Conread position: 88-654
Cow position: chr6:15963267-15962683 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 99

Conread position: 88-669
Cow position: chr6:916665-917295 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 163

Conread position: 88-669
Cow position: chr6:2367610-2367010 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 197

Conread position: 89-409
Cow position: chr6:35824475-35824801 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 29, 63

Conread position: 89-415
Cow position: chr6:43798288-43797946 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 29, 239

Conread position: 89-613
Cow position: chr6:182920-182344 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 243

Conread position: 89-619
Cow position: chr6:10611451-10612030 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 239

Conread position: 89-631
Cow position: chr6:8204803-8205403 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 162

Conread position: 89-634
Cow position: chr6:64718944-64719536 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 162

Conread position: 89-652
Cow position: chr6:3015489-3016078 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 184

Conread position: 89-657
Cow position: chr6:15924966-15924354 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 162

Conread position: 89-669
Cow position: chr6:3272856-3272230 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 52

Conread position: 90-400
Cow position: chr6:12351453-12351779 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 28, 170

Conread position: 91-414
Cow position: chr6:53936000-53935667 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 27, 91

Conread position: 91-417
Cow position: chr6:50636915-50637255 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 27, 237

Conread position: 91-669
Cow position: chr6:12628526-12629148 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 224

Conread position: 92-397
Cow position: chr6:3927772-3928096 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 234

Conread position: 94-672
Cow position: chr6:15480224-15480824 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 78

Conread position: 95-556
Cow position: chr6:6474808-6474308 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 346
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 233

Conread position: 96-619
Cow position: chr6:16674366-16674881 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 362
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 237

Conread position: 99-416
Cow position: chr6:4904341-4904017 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 106

Conread position: 101-672
Cow position: chr6:28550437-28549799 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 426
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 16

Conread position: 107-408
Cow position: chr6:43790933-43790619 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 45, 140

Conread position: 109-409
Cow position: chr6:66277083-66277399 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 240
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 43, 8

Conread position: 109-503
Cow position: chr6:18496966-18497386 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 278
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 43, 218

Conread position: 115-654
Cow position: chr6:9738604-9738016 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 5

Conread position: 117-414
Cow position: chr6:64425150-64425465 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 35, 159

Conread position: 119-315
Cow position: chr6:41264697-41264907 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 205

Conread position: 119-400
Cow position: chr6:21711218-21711512 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 218
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 49, 128

Conread position: 119-414
Cow position: chr6:43087935-43087627 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 35, 206

Conread position: 119-618
Cow position: chr6:28185673-28185117 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 128

Conread position: 120-414
Cow position: chr6:53462494-53462190 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 215
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 33, 204

Conread position: 122-403
Cow position: chr6:44147288-44146992 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 125

Conread position: 125-307
Cow position: chr6:30318102-30317907 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 127

Conread position: 130-669
Cow position: chr6:6120311-6119737 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 195

Conread position: 133-414
Cow position: chr6:27761376-27761667 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 35, 187

Conread position: 135-607
Cow position: chr6:18751513-18751017 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 316
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 185

Conread position: 137-414
Cow position: chr6:31913499-31913210 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 213
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 17, 6

Conread position: 158-357
Cow position: chr6:705567-705775 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 146

Conread position: 160-634
Cow position: chr6:27172534-27173047 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 9

Conread position: 161-561
Cow position: chr6:1734898-1735310 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 272
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 36, 8

Conread position: 173-400
Cow position: chr6:16418965-16418735 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 63

Conread position: 173-400
Cow position: chr6:59504183-59504405 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 43

Conread position: 173-409
Cow position: chr6:26653637-26653862 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 30

Conread position: 173-414
Cow position: chr6:45975224-45975474 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 30, 70

Conread position: 173-608
Cow position: chr6:39847630-39848110 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 326
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 69

Conread position: 174-400
Cow position: chr6:11829910-11829685 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 29

Conread position: 174-634
Cow position: chr6:50486058-50485566 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 148

Conread position: 176-669
Cow position: chr6:35417223-35416722 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 27

Conread position: 178-612
Cow position: chr6:15784252-15783785 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 90

Conread position: 185-400
Cow position: chr6:888296-888508 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 7

Conread position: 187-409
Cow position: chr6:14498206-14497990 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 13

Conread position: 187-414
Cow position: chr6:1888695-1888472 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 27

Conread position: 189-397
Cow position: chr6:65049918-65049711 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 25

Conread position: 194-400
Cow position: chr6:34074606-34074819 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 20

Conread position: 194-400
Cow position: chr6:44950713-44950509 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 7

Conread position: 194-413
Cow position: chr6:11168253-11168470 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 24

Conread position: 194-537
Cow position: chr6:55386016-55386378 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 44, 20

Conread position: 194-609
Cow position: chr6:365638-366078 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 194-619
Cow position: chr6:20553494-20553038 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 319
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 44, 20

Conread position: 201-400
Cow position: chr6:11289701-11289505 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 41, 13

Conread position: 201-549
Cow position: chr6:39359428-39359067 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 89

Conread position: 202-375
Cow position: chr6:47573538-47573709 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 12

Conread position: 202-668
Cow position: chr6:47380433-47380918 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 12

Conread position: 207-395
Cow position: chr6:13404794-13404979 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 29

Conread position: 208-400
Cow position: chr6:66838889-66839081 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 19

Conread position: 209-402
Cow position: chr6:66548238-66548427 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 35, 25

Conread position: 210-400
Cow position: chr6:31010048-31009857 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 27, 101

Conread position: 210-414
Cow position: chr6:25217718-25217919 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 32, 28

Conread position: 210-672
Cow position: chr6:10651024-10650539 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 211-414
Cow position: chr6:45724383-45724180 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 23

Conread position: 211-650
Cow position: chr6:33950387-33949927 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 81

Conread position: 213-409
Cow position: chr6:28475823-28476019 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 26, 83

Conread position: 213-657
Cow position: chr6:59596026-59596482 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 99

Conread position: 216-619
Cow position: chr6:3119776-3119340 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 288
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 29, 77

Conread position: 220-669
Cow position: chr6:14851976-14851495 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 224-414
Cow position: chr6:38932479-38932289 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 18, 10

Conread position: 226-414
Cow position: chr6:49826476-49826287 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 16, 87

Conread position: 228-417
Cow position: chr6:46947599-46947787 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 14, 6

Conread position: 229-414
Cow position: chr6:9586845-9587030 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 13, 5

Conread position: 234-400
Cow position: chr6:68871123-68871290 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 79

Conread position: 234-409
Cow position: chr6:42615885-42616057 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 234-414
Cow position: chr6:23880568-23880389 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 79

Conread position: 234-414
Cow position: chr6:49165815-49165637 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 59

Conread position: 236-384
Cow position: chr6:11639436-11639287 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 77

Conread position: 240-414
Cow position: chr6:18520288-18520117 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 10

Conread position: 242-609
Cow position: chr6:35883365-35883765 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 73

Conread position: 245-400
Cow position: chr6:38672031-38672184 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 247-660
Cow position: chr6:52241000-52240585 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 281
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 25, 45

Conread position: 251-414
Cow position: chr6:57181623-57181785 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 41

Conread position: 252-400
Cow position: chr6:61829032-61829180 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 15, 60

Conread position: 252-414
Cow position: chr6:15276436-15276274 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 17, 60

Conread position: 252-414
Cow position: chr6:65875478-65875317 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 17, 60

Conread position: 252-634
Cow position: chr6:41414539-41414127 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 17, 62

Conread position: 252-634
Cow position: chr6:45480273-45479870 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 60

Conread position: 252-634
Cow position: chr6:53543675-53543265 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 252-669
Cow position: chr6:40550895-40550448 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 60

Conread position: 253-669
Cow position: chr6:50121123-50120675 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 255-652
Cow position: chr6:52899757-52900182 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 288
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 16, 59

Conread position: 257-402
Cow position: chr6:24632434-24632294 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 108, 17

Conread position: 258-414
Cow position: chr6:55592865-55593020 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 54

Conread position: 258-618
Cow position: chr6:1402719-1402355 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 54

Conread position: 258-618
Cow position: chr6:1407307-1406943 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 11, 54

Conread position: 260-596
Cow position: chr6:1380643-1380279 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 32

Conread position: 264-405
Cow position: chr6:237059-236919 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 268-400
Cow position: chr6:3573617-3573747 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 21

Conread position: 268-414
Cow position: chr6:60332163-60332308 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 268-619
Cow position: chr6:530060-529686 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 115, 43

Conread position: 269-571
Cow position: chr6:44509887-44510217 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 122, 22

Conread position: 270-655
Cow position: chr6:13696323-13695932 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 132, 43

Conread position: 270-672
Cow position: chr6:45279789-45280192 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 21

Conread position: 273-414
Cow position: chr6:6556786-6556926 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 274-413
Cow position: chr6:42135942-42135804 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 274-657
Cow position: chr6:58605356-58605769 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 37

Conread position: 275-414
Cow position: chr6:9234339-9234477 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 275-609
Cow position: chr6:31150318-31150659 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 25

Conread position: 280-414
Cow position: chr6:22044176-22044043 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 284-414
Cow position: chr6:1262718-1262847 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 288-414
Cow position: chr6:2641387-2641512 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 291-672
Cow position: chr6:30317098-30316686 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 22

Conread position: 294-634
Cow position: chr6:58030626-58030995 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 17

Conread position: 295-592
Cow position: chr6:17927271-17927599 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 81, 16

Conread position: 313-664
Cow position: chr6:64887843-64888205 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 246
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 89, 225

Conread position: 319-610
Cow position: chr6:33470176-33470472 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 43

Conread position: 324-655
Cow position: chr6:1498076-1498437 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 242
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 8

Conread position: 329-658
Cow position: chr6:44494108-44494448 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 89, 10

Conread position: 348-657
Cow position: chr6:705905-706239 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 54, 0

Conread position: 356-654
Cow position: chr6:2087455-2087762 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 12

Conread position: 357-612
Cow position: chr6:1380331-1380076 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 8

Conread position: 366-634
Cow position: chr6:33809491-33809216 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 5, 53

Conread position: 397-650
Cow position: chr6:6187507-6187755 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 90, 45

Conread position: 397-657
Cow position: chr6:21832687-21832420 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 135

Conread position: 398-656
Cow position: chr6:27534830-27534563 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 399-654
Cow position: chr6:29085400-29085138 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 231

Conread position: 399-672
Cow position: chr6:32427135-32427406 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 50

Conread position: 401-612
Cow position: chr6:24242268-24242485 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 401-619
Cow position: chr6:34493652-34493878 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 0

Conread position: 401-619
Cow position: chr6:34504544-34504318 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 176
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 22, 0

Conread position: 401-649
Cow position: chr6:2186805-2186549 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 22, 0

Conread position: 406-634
Cow position: chr6:6034813-6034579 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 53, 15

Conread position: 414-634
Cow position: chr6:32286542-32286772 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 6, 0

Conread position: 420-609
Cow position: chr6:39912322-39912517 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 39, 85

Conread position: 420-634
Cow position: chr6:452266-452045 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 421-568
Cow position: chr6:27761700-27761854 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 421-575
Cow position: chr6:12351830-12351991 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 421-607
Cow position: chr6:34129455-34129648 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-607
Cow position: chr6:43039069-43038876 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 421-607
Cow position: chr6:66188802-66188609 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 421-609
Cow position: chr6:843830-843635 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 421-613
Cow position: chr6:11722198-11722011 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 64, 30

Conread position: 421-613
Cow position: chr6:18520084-18519885 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 154
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-613
Cow position: chr6:43049197-43048998 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 421-613
Cow position: chr6:62001342-62001145 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 22, 15

Conread position: 421-618
Cow position: chr6:9234510-9234713 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 162

Conread position: 421-618
Cow position: chr6:22044010-22043806 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 421-618
Cow position: chr6:28064989-28065193 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 38, 0

Conread position: 421-618
Cow position: chr6:45937296-45937493 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 117

Conread position: 421-619
Cow position: chr6:1105152-1104949 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 38, 179

Conread position: 421-619
Cow position: chr6:1796625-1796830 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 37, 0

Conread position: 421-619
Cow position: chr6:12926571-12926776 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 110

Conread position: 421-626
Cow position: chr6:49165604-49165392 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 421-627
Cow position: chr6:2089281-2089487 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 140

Conread position: 421-631
Cow position: chr6:21711702-21711921 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 31, 0

Conread position: 421-631
Cow position: chr6:47040211-47039994 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 421-634
Cow position: chr6:328362-328145 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 64, 47

Conread position: 421-634
Cow position: chr6:478548-478768 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 36, 0

Conread position: 421-634
Cow position: chr6:888555-888775 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 169
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:1507512-1507292 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:3152216-3152436 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 421-634
Cow position: chr6:6182710-6182490 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:6556959-6557179 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:6569220-6569013 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 94

Conread position: 421-634
Cow position: chr6:7467652-7467432 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:11453870-11453650 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:11869936-11869716 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:12997419-12997639 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:13850736-13850956 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:16050292-16050075 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 64, 187

Conread position: 421-634
Cow position: chr6:17112167-17111947 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:17386521-17386741 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:19103910-19103690 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 421-634
Cow position: chr6:19713236-19713016 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:23880058-23879838 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:26325201-26324982 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 201

Conread position: 421-634
Cow position: chr6:26772123-26771903 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:28481335-28481548 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 38, 101

Conread position: 421-634
Cow position: chr6:31913177-31912957 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:31940865-31941085 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:32419947-32420168 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 200

Conread position: 421-634
Cow position: chr6:33490056-33489836 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:36230528-36230308 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:38932256-38932036 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:39897948-39898168 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:40813363-40813583 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:41231486-41231706 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:44146949-44146729 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:46947817-46948036 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:49826254-49826034 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:55238694-55238908 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 141

Conread position: 421-634
Cow position: chr6:56452097-56451877 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:57521173-57521393 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:60332341-60332561 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:60379161-60379381 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:60876298-60876514 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 124

Conread position: 421-634
Cow position: chr6:61829227-61829447 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:63177041-63177261 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:67173553-67173773 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:67448928-67448708 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 38, 0

Conread position: 421-634
Cow position: chr6:68030177-68030397 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 421-654
Cow position: chr6:3573794-3574030 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 64, 43

Conread position: 421-657
Cow position: chr6:5946777-5946534 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 38, 0

Conread position: 421-657
Cow position: chr6:15276242-15275999 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 38, 110

Conread position: 421-657
Cow position: chr6:55042125-55041888 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 38, 200

Conread position: 421-669
Cow position: chr6:17049368-17049625 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 248

Conread position: 421-669
Cow position: chr6:25357863-25357609 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 245

Conread position: 421-669
Cow position: chr6:58016354-58016601 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 108

Conread position: 421-672
Cow position: chr6:8536297-8536040 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 38, 80

Conread position: 422-575
Cow position: chr6:59710729-59710889 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 422-613
Cow position: chr6:14305623-14305821 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 422-633
Cow position: chr6:40278058-40278276 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 422-634
Cow position: chr6:22737708-22737488 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 422-634
Cow position: chr6:27151442-27151223 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 422-653
Cow position: chr6:58880214-58880443 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 9

Conread position: 422-668
Cow position: chr6:7105530-7105281 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 201

Conread position: 424-633
Cow position: chr6:47025040-47025254 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 424-634
Cow position: chr6:28476072-28476288 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 35, 155

Conread position: 424-654
Cow position: chr6:42616099-42616335 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 120

Conread position: 424-657
Cow position: chr6:14950651-14950411 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 15

Conread position: 424-658
Cow position: chr6:30077281-30077042 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 95

Conread position: 427-609
Cow position: chr6:55945421-55945233 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 427-672
Cow position: chr6:63405816-63406059 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 83

Conread position: 428-621
Cow position: chr6:49732802-49732998 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 110

Conread position: 428-627
Cow position: chr6:49761468-49761681 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 428-630
Cow position: chr6:58952116-58951910 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 75

Conread position: 428-633
Cow position: chr6:11168510-11168724 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 428-633
Cow position: chr6:58072665-58072873 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 428-654
Cow position: chr6:13405233-13405467 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 178
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 428-655
Cow position: chr6:17556667-17556433 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 31, 103

Conread position: 428-655
Cow position: chr6:35600684-35600918 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 103

Conread position: 428-657
Cow position: chr6:16766835-16766599 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 178
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 0

Conread position: 428-660
Cow position: chr6:65892864-65892629 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 31, 127

Conread position: 428-668
Cow position: chr6:52978154-52977907 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 31, 239

Conread position: 428-668
Cow position: chr6:59619079-59619327 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 231

Conread position: 428-669
Cow position: chr6:2618558-2618314 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 57, 36

Conread position: 428-672
Cow position: chr6:14290490-14290255 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 82

Conread position: 428-672
Cow position: chr6:18150280-18150035 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 14

Conread position: 428-672
Cow position: chr6:22930645-22930397 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 59, 36

Conread position: 428-672
Cow position: chr6:34237082-34236840 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 13

Conread position: 429-612
Cow position: chr6:5130447-5130257 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 429-613
Cow position: chr6:27475418-27475608 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 429-613
Cow position: chr6:43087586-43087399 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 98

Conread position: 429-618
Cow position: chr6:21857359-21857163 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 429-618
Cow position: chr6:67553239-67553434 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 11

Conread position: 429-653
Cow position: chr6:47848899-47848671 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 173
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 34, 12

Conread position: 429-653
Cow position: chr6:52189976-52189751 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 14, 7

Conread position: 429-655
Cow position: chr6:9840123-9839897 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 114

Conread position: 429-655
Cow position: chr6:11193577-11193348 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 429-655
Cow position: chr6:14897190-14897417 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 212

Conread position: 429-656
Cow position: chr6:34074874-34075104 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 192

Conread position: 429-657
Cow position: chr6:42266745-42266974 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 125

Conread position: 429-657
Cow position: chr6:43790572-43790335 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 430-584
Cow position: chr6:63704632-63704470 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 430-618
Cow position: chr6:127125-126930 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 0

Conread position: 430-634
Cow position: chr6:23568586-23568375 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 430-651
Cow position: chr6:4680599-4680825 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 174
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 27, 170

Conread position: 430-654
Cow position: chr6:18970428-18970202 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 146

Conread position: 430-655
Cow position: chr6:10570889-10570649 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 172
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 201

Conread position: 430-662
Cow position: chr6:67211581-67211344 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 192

Conread position: 430-672
Cow position: chr6:618423-618667 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 187
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 18, 9

Conread position: 431-596
Cow position: chr6:16699214-16699386 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 431-618
Cow position: chr6:28171919-28172113 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 431-634
Cow position: chr6:22805833-22805628 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 97

Conread position: 431-652
Cow position: chr6:15181174-15181391 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 82

Conread position: 431-653
Cow position: chr6:43330410-43330181 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 26, 14

Conread position: 431-653
Cow position: chr6:52245517-52245745 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 28, 181

Conread position: 431-655
Cow position: chr6:8634296-8634066 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 431-655
Cow position: chr6:38438614-38438845 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 431-656
Cow position: chr6:41531588-41531830 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 431-656
Cow position: chr6:49625841-49626070 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 73

Conread position: 431-657
Cow position: chr6:39957084-39957310 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 27, 133

Conread position: 431-662
Cow position: chr6:41556343-41556575 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 56, 42

Conread position: 431-668
Cow position: chr6:24632239-24631996 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 108

Conread position: 431-669
Cow position: chr6:6595431-6595677 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 431-669
Cow position: chr6:64425800-64426043 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 170

Conread position: 431-672
Cow position: chr6:12534735-12534979 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 177
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 13, 114

Conread position: 432-669
Cow position: chr6:50113693-50113930 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 27, 160

Conread position: 433-618
Cow position: chr6:34017999-34017807 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 172

Conread position: 433-660
Cow position: chr6:44950450-44950215 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 96

Conread position: 434-609
Cow position: chr6:57302622-57302802 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 435-657
Cow position: chr6:57856781-57857011 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 439-648
Cow position: chr6:18571563-18571352 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 7, 62

Conread position: 440-634
Cow position: chr6:2452864-2453064 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 38

Conread position: 440-634
Cow position: chr6:27526946-27526745 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 19, 0

Conread position: 440-672
Cow position: chr6:46218706-46218947 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 18, 229

Conread position: 441-609
Cow position: chr6:66750768-66750939 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 441-628
Cow position: chr6:47154431-47154625 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 441-634
Cow position: chr6:11289441-11289248 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 49, 23

Conread position: 441-660
Cow position: chr6:26654132-26654353 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 72

Conread position: 442-634
Cow position: chr6:46633140-46633337 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 0

Conread position: 442-662
Cow position: chr6:53672357-53672582 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 80

Conread position: 442-669
Cow position: chr6:224489-224252 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 137

Conread position: 448-672
Cow position: chr6:33983841-33984070 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 209

Conread position: 449-612
Cow position: chr6:23000221-23000393 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 137

Conread position: 455-581
Cow position: chr6:45736809-45736678 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 455-634
Cow position: chr6:29283305-29283490 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 455-654
Cow position: chr6:6163172-6163369 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 35, 59

Conread position: 456-672
Cow position: chr6:13591349-13591567 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 169
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 31, 20

Conread position: 457-619
Cow position: chr6:1834030-1834198 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 73

Conread position: 457-634
Cow position: chr6:46764366-46764184 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 457-655
Cow position: chr6:62326310-62326513 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 28, 0

Conread position: 458-613
Cow position: chr6:18987180-18987337 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 71

Conread position: 462-619
Cow position: chr6:28113010-28112853 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 27

Conread position: 462-634
Cow position: chr6:34405342-34405519 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 462-669
Cow position: chr6:11639158-11638954 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 124

Conread position: 466-654
Cow position: chr6:6205725-6205917 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 107

Conread position: 472-618
Cow position: chr6:49963898-49963750 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 475-655
Cow position: chr6:18497381-18497562 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 479-634
Cow position: chr6:10598065-10598222 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 485-621
Cow position: chr6:38988743-38988607 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 486-602
Cow position: chr6:54887783-54887666 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 93
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 486-634
Cow position: chr6:16644965-16645114 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 486-634
Cow position: chr6:18803989-18803841 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 73, 62

Conread position: 486-634
Cow position: chr6:27939103-27939252 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 0

Conread position: 486-634
Cow position: chr6:53537144-53537294 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 486-652
Cow position: chr6:24624069-24623904 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 99

Conread position: 486-655
Cow position: chr6:16410129-16410295 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 24

Conread position: 486-655
Cow position: chr6:43585416-43585246 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 73, 0

Conread position: 486-657
Cow position: chr6:13314960-13314789 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 91

Conread position: 486-668
Cow position: chr6:12090898-12090721 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 114

Conread position: 486-668
Cow position: chr6:35704452-35704266 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 150

Conread position: 486-669
Cow position: chr6:4274138-4274322 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 166

Conread position: 486-669
Cow position: chr6:6944870-6944691 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 487-654
Cow position: chr6:25180112-25179944 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 490-634
Cow position: chr6:19718658-19718803 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 0

Conread position: 490-655
Cow position: chr6:27365252-27365414 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 130, 36

Conread position: 494-634
Cow position: chr6:21163380-21163521 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 494-634
Cow position: chr6:33996824-33996965 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 494-653
Cow position: chr6:58595328-58595169 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 5

Conread position: 501-672
Cow position: chr6:66549714-66549884 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 149, 0

Conread position: 504-618
Cow position: chr6:9587622-9587737 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 505-634
Cow position: chr6:28399684-28399554 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 507-662
Cow position: chr6:61179619-61179774 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 511-672
Cow position: chr6:33896548-33896385 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 142

Conread position: 521-672
Cow position: chr6:48947551-48947402 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 532-672
Cow position: chr6:45792849-45792990 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 92, 120

Show alignments to all cow chromosomes.