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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8003H20.3
        

               
Conread position:
               
1-110
               

               
Cow position:
               
chr13:18002938-18003049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
1-113
               

               
Cow position:
               
chr13:19022595-19022480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr13:17567641-17567759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr13:20597151-20597272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-135
               

               
Cow position:
               
chr13:5608293-5608156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr13:4420658-4420516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-138
               

               
Cow position:
               
chr13:11148110-11147970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr13:5078637-5078799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr13:12618743-12618904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr13:37946630-37946791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr13:28653179-28652992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr13:34190865-34191059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr13:1570813-1570621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
90, 67
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr13:12940901-12940704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr13:25892152-25892349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 179
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr13:28570185-28569980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr13:9900652-9900447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr13:5671220-5671417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr13:51901960-51901753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:179154-179365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
87, 153
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:32733548-32733335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 176
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:39827083-39826880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr13:40989426-40989210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr13:6054724-6054511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr13:26073277-26073069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
125, 150
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr13:21126728-21126947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
54, 190
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr13:5910371-5910590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr13:33347414-33347182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr13:21135384-21135607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr13:18908385-18908162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
105, 134
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr13:20243394-20243612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 97
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:8960927-8960702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr13:46465570-46465347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 109
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:19279680-19279425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr13:45636897-45637125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 124
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr13:3480095-3479846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr13:33049168-33048928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
84, 55
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr13:33218540-33218306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
196, 8
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:18197320-18197074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 11
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:19396698-19396451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:21988757-21989004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:24373753-24373500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:32978361-32978131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
44, 84
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:41360097-41359851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr13:51856290-51856538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 44
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr13:43384288-43384537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:10755262-10755012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr13:38897908-38898154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
125, 180
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr13:52077476-52077723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
53, 168
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr13:17787007-17787259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 179
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr13:265493-265227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr13:7366097-7366369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr13:48629336-48629068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 85
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr13:33467063-33467343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 132
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr13:12233110-12233388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
90, 253
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr13:52010238-52010515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
83, 227
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr13:1011680-1011391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr13:27985096-27985364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr13:60436530-60436822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr13:11290468-11290763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 253
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr13:37947667-37947950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr13:39952066-39952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 107
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr13:42860225-42860528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 249
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:12616103-12615807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
58, 215
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:21402447-21402753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 273
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:25248796-25249114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr13:45355626-45355321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr13:11795058-11794744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr13:61954882-61955198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr13:8690482-8690163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr13:34375603-34375299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr13:1636349-1636039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
83, 158
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr13:19426350-19426670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr13:15958965-15958644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 54
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr13:37945872-37946184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr13:43629416-43629754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 212
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr13:1368360-1368046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 146
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:5175915-5175583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
78, 279
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:6606672-6607002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 261
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:6616400-6616731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 259
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:19178621-19178294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:21155143-21155473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:54237685-54237375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 43
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:60690371-60690707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr13:61170376-61170701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr13:49977313-49977648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr13:6835462-6835780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 23
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr13:21256007-21256346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 86
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:1767117-1766782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 224
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:22774952-22775286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
90, 215
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr13:37516789-37517125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr13:50690044-50690386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr13:24285900-24285565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr13:27018962-27018620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr13:3003792-3003448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 332
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr13:18351191-18350846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr13:32535998-32535661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr13:62169196-62169545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
125, 89
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr13:9803405-9803066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 127
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:16270284-16269924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 170
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr13:58043976-58043625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 276
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:49612447-49612089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 343
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr13:50440185-50439827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 343
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr13:3970282-3970644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
88, 343
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr13:7010817-7010455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 273
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr13:3701779-3701412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 7
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr13:59687521-59687910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
93, 34
               

               
Conread position:
               
1-370
               

               
Cow position:
               
chr13:26079796-26079439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
132, 91
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr13:18215778-18215404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 196
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr13:52922450-52922027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr13:17855720-17855293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:8202542-8202947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 27
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:17613694-17613259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:32949658-32950073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 285
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr13:46324441-46324870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 102
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr13:12682194-12682625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 295
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr13:26382882-26383319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 334
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr13:9974718-9975159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr13:23269865-23270290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 308
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr13:46182121-46181703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 58
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:661289-661730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:3015822-3016263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 181
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:25062763-25062323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:34941309-34941740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 206
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr13:47502368-47502804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr13:1042608-1043066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr13:56686779-56686327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:7663083-7663535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 6
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:22085412-22085859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 124
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr13:57493836-57494302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 313
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:31814213-31813757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr13:53566932-53566482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
1-454
               

               
Cow position:
               
chr13:31511723-31512194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
90, 368
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr13:43762519-43762035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr13:11820925-11820462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr13:12990193-12989711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
1-472
               

               
Cow position:
               
chr13:21175975-21176459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 77
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr13:25434781-25435274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 202
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr13:185852-185370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 123
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr13:2414372-2413874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr13:13766104-13765623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
314, 63
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr13:12407936-12408470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 299
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr13:20605771-20606309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 282
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr13:34263034-34263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 56
               

               
Conread position:
               
1-536
               

               
Cow position:
               
chr13:52637629-52637101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
1-537
               

               
Cow position:
               
chr13:52057886-52057343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 191
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr13:8609204-8609769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr13:12977907-12977379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 155
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr13:33352025-33352565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:311780-311230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 332
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:1155360-1155907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 269
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:9907084-9906526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 120
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:12044993-12045548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:13261363-13260789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 426
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:20377994-20378520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 54
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:21708529-21708002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 249
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:34261597-34261033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:34282028-34281479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 406
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:40943590-40943019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:41807114-41806574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 53
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr13:47007391-47007915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 190
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr13:60974413-60973860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr13:12670109-12670662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 68
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr13:34728492-34729051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 278
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr13:38283636-38284207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 465
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:971548-972116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 216
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:13321124-13320579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:14544459-14543913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 72
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:16292889-16292318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:20683775-20684372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:20820490-20821057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 210
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:35525866-35526413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 196
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr13:52284257-52283688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 249
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr13:60508775-60509350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 67
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:152291-151745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 117
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:12875636-12876201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 179
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:15162323-15162860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:20893292-20893866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 196
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:21107478-21106922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 160
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:21276204-21275628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 277
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr13:38329980-38329395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chr13:49805316-49804766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
1-566
               

               
Cow position:
               
chr13:6086553-6087143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 257
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr13:17158516-17159107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 484
               

               
Conread position:
               
1-569
               

               
Cow position:
               
chr13:38562292-38561698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr13:16015163-16014574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 208
               

               
Conread position:
               
1-570
               

               
Cow position:
               
chr13:51528099-51528667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 40
               

               
Conread position:
               
1-592
               

               
Cow position:
               
chr13:40652281-40651668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 267
               

               
Conread position:
               
2-159
               

               
Cow position:
               
chr13:54864716-54864875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
2-179
               

               
Cow position:
               
chr13:20088202-20088383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
2-199
               

               
Cow position:
               
chr13:3143585-3143386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 131
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr13:4441885-4441680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
50, 96
               

               
Conread position:
               
2-215
               

               
Cow position:
               
chr13:30037501-30037713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr13:25453517-25453268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr13:25882879-25883124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
2-292
               

               
Cow position:
               
chr13:36264311-36264009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr13:57027985-57028310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
89, 244
               

               
Conread position:
               
2-323
               

               
Cow position:
               
chr13:36346335-36345988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr13:46985367-46985033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr13:34556001-34556323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
2-330
               

               
Cow position:
               
chr13:47215906-47216246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr13:562790-563133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-331
               

               
Cow position:
               
chr13:25531443-25531777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr13:50192781-50192413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
84, 5
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr13:20863672-20864046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 5
               

               
Conread position:
               
2-390
               

               
Cow position:
               
chr13:32717525-32717922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 37
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr13:15167163-15166705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 132
               

               
Conread position:
               
2-461
               

               
Cow position:
               
chr13:10928646-10929118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 230
               

               
Conread position:
               
2-521
               

               
Cow position:
               
chr13:20666041-20666567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 231
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr13:20571070-20570529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 149
               

               
Conread position:
               
2-542
               

               
Cow position:
               
chr13:1231998-1231440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 134
               

               
Conread position:
               
3-124
               

               
Cow position:
               
chr13:17612943-17612821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr13:5621750-5621622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr13:13803172-13803300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr13:58313978-58314106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-130
               

               
Cow position:
               
chr13:32980596-32980467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr13:8010233-8010364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr13:54053269-54053400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr13:47317911-47317735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-175
               

               
Cow position:
               
chr13:22980611-22980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 44
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr13:14589868-14589680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr13:4477768-4477960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr13:56526976-56527171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
86, 164
               

               
Conread position:
               
3-201
               

               
Cow position:
               
chr13:30926107-30925904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr13:2137578-2137372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr13:6343524-6343732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
86, 79
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr13:3353645-3353854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr13:19565063-19564855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 143
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr13:50188970-50188761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr13:32826061-32826272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr13:24729294-24729083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
93, 150
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:3166017-3166231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:6317111-6316901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:6716390-6716176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:45455737-45455951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:47509786-47510000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr13:53310368-53310582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr13:58465526-58465305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
86, 198
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr13:2186292-2186501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr13:37558648-37558426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr13:30504802-30504577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr13:24695709-24695466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr13:41608029-41608265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
123, 114
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr13:20777200-20776961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 143
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr13:5938878-5939129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr13:4615651-4615907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-251
               

               
Cow position:
               
chr13:18054901-18055154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr13:15591788-15592046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
86, 41
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr13:3319854-3320125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr13:28130381-28130113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr13:6361293-6361564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr13:20527338-20527070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 165
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr13:33500030-33499762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr13:52090727-52091004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr13:53531186-53531461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr13:16808227-16808510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr13:22790262-22789981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr13:35541046-35541331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr13:50189428-50189139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-287
               

               
Cow position:
               
chr13:32836084-32835814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
223, 81
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr13:995723-996029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr13:12389734-12389429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
81, 101
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr13:1458828-1458528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 125
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr13:50079098-50078790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr13:2114035-2113716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr13:8301200-8301516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:560743-560426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:2466088-2466405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
81, 275
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:4024220-4023899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
86, 317
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:6664483-6664166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:20472614-20472298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 311
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:26161134-26161451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:28413643-28413329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
81, 179
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:32754895-32755206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:32793695-32793380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 142
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:33522315-33521999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr13:54063009-54063319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 129
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr13:23682404-23682713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr13:645569-645889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr13:5028753-5029073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr13:14816000-14815677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr13:17439227-17439533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 133
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr13:24059985-24060311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
63, 234
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr13:60645942-60645615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:670884-671218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:681696-682033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:1568644-1568313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 287
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:6552820-6552490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
81, 295
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:8782753-8783084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:24931176-24930843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:36673313-36673645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:43106871-43106539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:54975459-54975791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr13:57786377-57786709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr13:7504611-7504941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
185, 122
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr13:34871825-34872162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr13:46055513-46055175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:3993470-3993131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:6945719-6945378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:19229547-19229205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:20327319-20327657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 283
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:30794166-30793828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 333
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:42839193-42839528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:52019645-52019305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr13:60447747-60448086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 276
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr13:53156739-53156400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 311
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr13:40657448-40657788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
33, 272
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr13:1346520-1346175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 324
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr13:11834137-11834469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
86, 152
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr13:36701491-36701840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr13:4963871-4964223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 336
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr13:8172753-8172399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr13:13762336-13762689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr13:21231157-21231514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
86, 214
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr13:55338385-55338738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr13:50284549-50284196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 104
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:491728-491372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:2725162-2724806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:4035481-4035135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 133
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:4665700-4666056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 288
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:6869944-6870299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
81, 340
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:7869919-7869555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
83, 145
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:11486681-11487037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:13220605-13220960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
81, 283
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:13776606-13776962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:14551486-14551130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:15536839-15536485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 264
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:15538342-15537988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 264
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:16922522-16922878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:21729460-21729104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 280
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:23456747-23457103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 275
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:31756973-31756623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
83, 335
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:32524220-32523865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 340
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:34212390-34212746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:38574498-38574140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 343
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:42249730-42250086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:43892466-43892818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 114
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:45934269-45934625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:47023054-47022698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:49446401-49446757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:50618620-50618266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 273
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:51297843-51297487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:52276068-52276424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:52316838-52316482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:53208317-53208671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
83, 295
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:57407315-57406959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr13:62027750-62028104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr13:14215350-14214993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 333
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr13:13330191-13330548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 66
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr13:43628777-43629143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:3692971-3693340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:4736087-4736454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 295
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:5498160-5497793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
81, 170
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:11267006-11267375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:14033932-14033563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:15657180-15657549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:18121229-18120860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:27416981-27416612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:27475514-27475145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 337
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:32081521-32081890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
83, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:42086490-42086123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
79, 180
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:44189962-44190331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr13:52433285-52433650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 293
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr13:7403050-7403420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr13:13126085-13125707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
83, 323
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr13:36396822-36397258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-430
               

               
Cow position:
               
chr13:34670195-34669761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
84, 335
               

               
Conread position:
               
3-451
               

               
Cow position:
               
chr13:18835532-18835084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 195
               

               
Conread position:
               
3-452
               

               
Cow position:
               
chr13:17820915-17821391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr13:19882693-19883236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 187
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr13:52894473-52893946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
237, 79
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr13:61976619-61977160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 143
               

               
Conread position:
               
3-553
               

               
Cow position:
               
chr13:51941075-51940513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 198
               

               
Conread position:
               
3-561
               

               
Cow position:
               
chr13:21235346-21235894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr13:609496-610090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr13:30799068-30798484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 185
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr13:42277245-42277459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
4-238
               

               
Cow position:
               
chr13:34052257-34052497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr13:5493014-5493248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
141, 79
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr13:42229664-42229427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 92
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr13:43911316-43911588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr13:27027432-27027706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
4-287
               

               
Cow position:
               
chr13:16128159-16127869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
85, 6
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr13:14716992-14717303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
77, 141
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr13:42215472-42215104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 322
               

               
Conread position:
               
4-540
               

               
Cow position:
               
chr13:26098487-26097983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
4-542
               

               
Cow position:
               
chr13:33876007-33875470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 243
               

               
Conread position:
               
4-561
               

               
Cow position:
               
chr13:47547946-47548508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
80, 103
               

               
Conread position:
               
5-242
               

               
Cow position:
               
chr13:39950175-39950412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
5, 79
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr13:9350366-9350049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr13:32166957-32167299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
6, 183
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr13:9302031-9302400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
5-551
               

               
Cow position:
               
chr13:15288587-15289130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
6-415
               

               
Cow position:
               
chr13:19138780-19138356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 284
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr13:32017180-32017738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 331
               

               
Conread position:
               
7-171
               

               
Cow position:
               
chr13:26822472-26822302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr13:18836128-18836331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 118
               

               
Conread position:
               
7-239
               

               
Cow position:
               
chr13:6839790-6840034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
7-322
               

               
Cow position:
               
chr13:46458978-46458642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
7-371
               

               
Cow position:
               
chr13:13266143-13265768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 153
               

               
Conread position:
               
7-385
               

               
Cow position:
               
chr13:20440259-20440633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
7-416
               

               
Cow position:
               
chr13:889842-890254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 87
               

               
Conread position:
               
7-487
               

               
Cow position:
               
chr13:17800416-17799921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 57
               

               
Conread position:
               
7-564
               

               
Cow position:
               
chr13:56154821-56155394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 188
               

               
Conread position:
               
8-156
               

               
Cow position:
               
chr13:5447843-5447692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 93
               

               
Conread position:
               
8-203
               

               
Cow position:
               
chr13:20635156-20635359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 168
               

               
Conread position:
               
8-329
               

               
Cow position:
               
chr13:34333611-34333926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
76, 166
               

               
Conread position:
               
9-136
               

               
Cow position:
               
chr13:13222662-13222532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-163
               

               
Cow position:
               
chr13:21282136-21282292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
9-169
               

               
Cow position:
               
chr13:13283802-13283644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
9-171
               

               
Cow position:
               
chr13:33976011-33975849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr13:42085147-42084957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
117, 182
               

               
Conread position:
               
9-205
               

               
Cow position:
               
chr13:32870302-32870107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr13:42214485-42214283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr13:15580192-15579988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 140
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr13:44389947-44390149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 117
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr13:46105250-46105457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 176
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr13:49257653-49257863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 116
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr13:8136229-8136448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
9-225
               

               
Cow position:
               
chr13:2789620-2789836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr13:51483862-51484085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
79, 219
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr13:6650921-6651157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr13:9692889-9692660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
75, 204
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr13:12480451-12480694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
9-238
               

               
Cow position:
               
chr13:39487007-39487242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
121, 174
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr13:17270309-17270058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
72, 139
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr13:20537923-20537689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 199
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr13:16092146-16091877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr13:34037906-34037636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-270
               

               
Cow position:
               
chr13:4038206-4037949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
118, 60
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr13:52585685-52585979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr13:36937356-36937659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
75, 220
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr13:43119648-43119343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 108
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr13:26203808-26203486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
77, 267
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr13:3710190-3709861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-321
               

               
Cow position:
               
chr13:5752086-5752406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr13:34021710-34021388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 269
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr13:18567175-18567506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 327
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr13:3162837-3162510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr13:37122586-37122917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
75, 271
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr13:15869457-15869117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 168
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr13:19102026-19101676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 335
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr13:12990978-12990615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 335
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr13:31990531-31990894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 335
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr13:40926954-40926591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 335
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr13:31808852-31808440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 220
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr13:45604072-45604497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 280
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr13:6153439-6153874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-488
               

               
Cow position:
               
chr13:36771082-36771578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 186
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr13:2774458-2773913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 112
               

               
Conread position:
               
9-554
               

               
Cow position:
               
chr13:10988734-10989289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 119
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr13:25695428-25695986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 309
               

               
Conread position:
               
9-563
               

               
Cow position:
               
chr13:12448648-12449206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 142
               

               
Conread position:
               
10-119
               

               
Cow position:
               
chr13:9002087-9001975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-131
               

               
Cow position:
               
chr13:3822437-3822313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
10-160
               

               
Cow position:
               
chr13:8651917-8652075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr13:3649142-3648938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr13:5041156-5041360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr13:25413017-25412813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr13:48628187-48628385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
10-210
               

               
Cow position:
               
chr13:21986958-21987163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
76, 174
               

               
Conread position:
               
10-210
               

               
Cow position:
               
chr13:31607787-31607582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-220
               

               
Cow position:
               
chr13:54286431-54286642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr13:2955502-2955742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr13:27241258-27241027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
65, 75
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr13:30307066-30307303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-251
               

               
Cow position:
               
chr13:62018751-62019004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr13:33162870-33163140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-275
               

               
Cow position:
               
chr13:14743343-14743608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
10-290
               

               
Cow position:
               
chr13:1844788-1845081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
10-301
               

               
Cow position:
               
chr13:35761228-35761528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:1590501-1590193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:4945051-4945361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:8635919-8635609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:15280940-15281250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:18534095-18534404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 166
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:30468466-30468158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
79, 288
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:33332688-33332386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 273
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr13:55371822-55372132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-322
               

               
Cow position:
               
chr13:8838659-8838968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 25
               

               
Conread position:
               
10-322
               

               
Cow position:
               
chr13:21836654-21836332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 260
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr13:47590802-47591148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
69, 220
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr13:3356471-3356836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 312
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr13:32550393-32550759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
79, 337
               

               
Conread position:
               
10-410
               

               
Cow position:
               
chr13:19639088-19639510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr13:13904054-13904478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
79, 329
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr13:18329473-18329045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr13:34345954-34346375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 326
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr13:43151446-43151019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr13:60879564-60879980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
10-500
               

               
Cow position:
               
chr13:28683693-28683192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 74
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr13:1170806-1170256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 21
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr13:20175078-20174535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 170
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr13:30651514-30650983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 173
               

               
Conread position:
               
11-207
               

               
Cow position:
               
chr13:2475827-2476025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
78, 43
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr13:21009013-21008798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr13:16953008-16952785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
113, 69
               

               
Conread position:
               
11-240
               

               
Cow position:
               
chr13:13344294-13344058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 165
               

               
Conread position:
               
11-267
               

               
Cow position:
               
chr13:15920811-15920544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr13:58320608-58320312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
119, 102
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr13:13516887-13516526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
78, 289
               

               
Conread position:
               
11-431
               

               
Cow position:
               
chr13:47356957-47356551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 42
               

               
Conread position:
               
11-465
               

               
Cow position:
               
chr13:37483932-37484412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 292
               

               
Conread position:
               
11-554
               

               
Cow position:
               
chr13:15872787-15872222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 432
               

               
Conread position:
               
11-560
               

               
Cow position:
               
chr13:6974503-6973942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 183
               

               
Conread position:
               
11-563
               

               
Cow position:
               
chr13:6189293-6189823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 106
               

               
Conread position:
               
11-582
               

               
Cow position:
               
chr13:8362408-8362985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 287
               

               
Conread position:
               
12-199
               

               
Cow position:
               
chr13:11774406-11774594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr13:32921384-32921182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
12-210
               

               
Cow position:
               
chr13:35008642-35008841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
12-239
               

               
Cow position:
               
chr13:22076413-22076185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
74, 189
               

               
Conread position:
               
12-307
               

               
Cow position:
               
chr13:20561436-20561141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
69, 94
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr13:33517571-33517900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 253
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr13:9537889-9538212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
12-361
               

               
Cow position:
               
chr13:28140203-28140565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
72, 90
               

               
Conread position:
               
12-400
               

               
Cow position:
               
chr13:34508213-34507819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 270
               

               
Conread position:
               
12-410
               

               
Cow position:
               
chr13:43138892-43139293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr13:9049236-9049650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
72, 171
               

               
Conread position:
               
12-452
               

               
Cow position:
               
chr13:48627079-48626652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 120
               

               
Conread position:
               
12-542
               

               
Cow position:
               
chr13:46516399-46515857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 113
               

               
Conread position:
               
12-589
               

               
Cow position:
               
chr13:41918829-41919410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
13-205
               

               
Cow position:
               
chr13:1637067-1637264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
13-229
               

               
Cow position:
               
chr13:54071760-54071542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
123, 69
               

               
Conread position:
               
13-308
               

               
Cow position:
               
chr13:59169892-59169593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
13-308
               

               
Cow position:
               
chr13:60156568-60156277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 204
               

               
Conread position:
               
13-360
               

               
Cow position:
               
chr13:3557229-3557585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 321
               

               
Conread position:
               
13-477
               

               
Cow position:
               
chr13:12546567-12547052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 359
               

               
Conread position:
               
13-568
               

               
Cow position:
               
chr13:20879501-20880055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 136
               

               
Conread position:
               
14-561
               

               
Cow position:
               
chr13:42114352-42113793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
15-207
               

               
Cow position:
               
chr13:16114584-16114391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
15-215
               

               
Cow position:
               
chr13:41654393-41654597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
15-320
               

               
Cow position:
               
chr13:37981418-37981724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 121
               

               
Conread position:
               
15-363
               

               
Cow position:
               
chr13:6498927-6498581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 158
               

               
Conread position:
               
15-485
               

               
Cow position:
               
chr13:60429747-60430235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 25
               

               
Conread position:
               
16-348
               

               
Cow position:
               
chr13:37320585-37320928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
68, 328
               

               
Conread position:
               
17-227
               

               
Cow position:
               
chr13:18963320-18963105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr13:12244683-12244932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
17-322
               

               
Cow position:
               
chr13:17886824-17886528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
17-551
               

               
Cow position:
               
chr13:17622616-17622072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
18-353
               

               
Cow position:
               
chr13:57482976-57483322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
66, 326
               

               
Conread position:
               
19-210
               

               
Cow position:
               
chr13:62480210-62480405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 49
               

               
Conread position:
               
20-131
               

               
Cow position:
               
chr13:3861782-3861667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr13:6919176-6918989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 97
               

               
Conread position:
               
20-247
               

               
Cow position:
               
chr13:10754888-10754646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
20-276
               

               
Cow position:
               
chr13:32151895-32151631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
20-319
               

               
Cow position:
               
chr13:37980322-37980615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
20-323
               

               
Cow position:
               
chr13:4208489-4208797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
66, 115
               

               
Conread position:
               
20-330
               

               
Cow position:
               
chr13:25338941-25338614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
20-348
               

               
Cow position:
               
chr13:12395353-12395014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 324
               

               
Conread position:
               
20-431
               

               
Cow position:
               
chr13:20563326-20562893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
20-458
               

               
Cow position:
               
chr13:24754212-24753760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
20-561
               

               
Cow position:
               
chr13:16247976-16247418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
21-297
               

               
Cow position:
               
chr13:20834529-20834812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
21-348
               

               
Cow position:
               
chr13:19274926-19275270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
65, 311
               

               
Conread position:
               
22-207
               

               
Cow position:
               
chr13:25332492-25332683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
22-209
               

               
Cow position:
               
chr13:1000879-1000691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 106
               

               
Conread position:
               
22-256
               

               
Cow position:
               
chr13:35533149-35532915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 20
               

               
Conread position:
               
22-314
               

               
Cow position:
               
chr13:15957135-15956841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 199
               

               
Conread position:
               
22-322
               

               
Cow position:
               
chr13:40813456-40813143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
22-322
               

               
Cow position:
               
chr13:49283015-49283330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
22-344
               

               
Cow position:
               
chr13:18268165-18268499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
22-349
               

               
Cow position:
               
chr13:8473302-8472964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 304
               

               
Conread position:
               
23-204
               

               
Cow position:
               
chr13:3400647-3400833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
23-209
               

               
Cow position:
               
chr13:44399783-44399973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 161
               

               
Conread position:
               
23-307
               

               
Cow position:
               
chr13:5867886-5868180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
23-331
               

               
Cow position:
               
chr13:21039277-21039593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 90
               

               
Conread position:
               
24-262
               

               
Cow position:
               
chr13:21524750-21524505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
24-321
               

               
Cow position:
               
chr13:5091337-5091646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 46
               

               
Conread position:
               
24-322
               

               
Cow position:
               
chr13:15172084-15172391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-337
               

               
Cow position:
               
chr13:16833764-16834069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 106
               

               
Conread position:
               
24-412
               

               
Cow position:
               
chr13:2884375-2883980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 152
               

               
Conread position:
               
24-541
               

               
Cow position:
               
chr13:46525116-46525630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 164
               

               
Conread position:
               
25-210
               

               
Cow position:
               
chr13:49575963-49575774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
25-220
               

               
Cow position:
               
chr13:22570861-22570660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
25-235
               

               
Cow position:
               
chr13:31835942-31835733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
25-302
               

               
Cow position:
               
chr13:32773671-32773410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
108, 22
               

               
Conread position:
               
25-313
               

               
Cow position:
               
chr13:11571011-11570723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
66, 225
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr13:36537642-36537972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
58, 7
               

               
Conread position:
               
28-458
               

               
Cow position:
               
chr13:15460474-15460903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
63, 135
               

               
Conread position:
               
30-412
               

               
Cow position:
               
chr13:20649663-20650068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
31-290
               

               
Cow position:
               
chr13:57323773-57323506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
68, 31
               

               
Conread position:
               
31-330
               

               
Cow position:
               
chr13:34932564-34932874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
55, 256
               

               
Conread position:
               
31-542
               

               
Cow position:
               
chr13:26479899-26480405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 159
               

               
Conread position:
               
31-542
               

               
Cow position:
               
chr13:27524944-27525461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 399
               

               
Conread position:
               
31-557
               

               
Cow position:
               
chr13:17291816-17292345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 165
               

               
Conread position:
               
32-212
               

               
Cow position:
               
chr13:28558551-28558366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-240
               

               
Cow position:
               
chr13:29819921-29820141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
32-256
               

               
Cow position:
               
chr13:35853035-35853264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 218
               

               
Conread position:
               
32-319
               

               
Cow position:
               
chr13:36948853-36949149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 248
               

               
Conread position:
               
32-329
               

               
Cow position:
               
chr13:9125990-9125680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 136
               

               
Conread position:
               
32-337
               

               
Cow position:
               
chr13:3144662-3144347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
54, 300
               

               
Conread position:
               
32-366
               

               
Cow position:
               
chr13:20683263-20682919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
32-550
               

               
Cow position:
               
chr13:4553116-4552605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 135
               

               
Conread position:
               
32-562
               

               
Cow position:
               
chr13:44202306-44201787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
32-563
               

               
Cow position:
               
chr13:13089344-13088806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 231
               

               
Conread position:
               
33-308
               

               
Cow position:
               
chr13:22195919-22195637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
33-322
               

               
Cow position:
               
chr13:5119076-5119378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 254
               

               
Conread position:
               
33-542
               

               
Cow position:
               
chr13:57475105-57475619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
34-489
               

               
Cow position:
               
chr13:56148855-56148361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
34-489
               

               
Cow position:
               
chr13:56160112-56160606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 64
               

               
Conread position:
               
35-301
               

               
Cow position:
               
chr13:47073826-47074105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
35-331
               

               
Cow position:
               
chr13:7415724-7416030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
35-339
               

               
Cow position:
               
chr13:39948108-39948413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
94, 193
               

               
Conread position:
               
35-496
               

               
Cow position:
               
chr13:37382125-37381636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
35-541
               

               
Cow position:
               
chr13:20270907-20271432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
36-227
               

               
Cow position:
               
chr13:62151790-62151986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
36-240
               

               
Cow position:
               
chr13:19119310-19119100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 152
               

               
Conread position:
               
36-273
               

               
Cow position:
               
chr13:25825046-25824806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
36-332
               

               
Cow position:
               
chr13:55843797-55843487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
36-412
               

               
Cow position:
               
chr13:34035681-34035286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
53, 317
               

               
Conread position:
               
38-331
               

               
Cow position:
               
chr13:47313214-47312934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 91
               

               
Conread position:
               
39-255
               

               
Cow position:
               
chr13:8779702-8779481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
39-337
               

               
Cow position:
               
chr13:52178408-52178114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 177
               

               
Conread position:
               
39-429
               

               
Cow position:
               
chr13:20816620-20816225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 211
               

               
Conread position:
               
39-533
               

               
Cow position:
               
chr13:20813973-20814467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 211
               

               
Conread position:
               
40-216
               

               
Cow position:
               
chr13:548827-548650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 87
               

               
Conread position:
               
40-304
               

               
Cow position:
               
chr13:32657193-32656925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 209
               

               
Conread position:
               
41-278
               

               
Cow position:
               
chr13:47599672-47599444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
41-330
               

               
Cow position:
               
chr13:39202995-39203296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
41-559
               

               
Cow position:
               
chr13:3994234-3994763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 273
               

               
Conread position:
               
43-210
               

               
Cow position:
               
chr13:56505339-56505511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
44-230
               

               
Cow position:
               
chr13:45515649-45515839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
47, 178
               

               
Conread position:
               
44-330
               

               
Cow position:
               
chr13:25641807-25642108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
45, 269
               

               
Conread position:
               
44-330
               

               
Cow position:
               
chr13:32163704-32163408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 72
               

               
Conread position:
               
44-413
               

               
Cow position:
               
chr13:58525216-58524849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
44-542
               

               
Cow position:
               
chr13:17977639-17977140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 162
               

               
Conread position:
               
44-568
               

               
Cow position:
               
chr13:14927542-14927027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 86
               

               
Conread position:
               
46-330
               

               
Cow position:
               
chr13:34113228-34113520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 287
               

               
Conread position:
               
46-331
               

               
Cow position:
               
chr13:54080501-54080804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
43, 100
               

               
Conread position:
               
47-245
               

               
Cow position:
               
chr13:48378270-48378480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
47-308
               

               
Cow position:
               
chr13:51332157-51331888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
47-329
               

               
Cow position:
               
chr13:15740365-15740076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
158, 86
               

               
Conread position:
               
47-330
               

               
Cow position:
               
chr13:39912344-39912639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 230
               

               
Conread position:
               
47-410
               

               
Cow position:
               
chr13:23460335-23460705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
42, 140
               

               
Conread position:
               
47-561
               

               
Cow position:
               
chr13:9142584-9142050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 147
               

               
Conread position:
               
47-564
               

               
Cow position:
               
chr13:32283421-32282897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 22
               

               
Conread position:
               
48-331
               

               
Cow position:
               
chr13:47756675-47756381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
48, 285
               

               
Conread position:
               
48-337
               

               
Cow position:
               
chr13:43194473-43194181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
49-542
               

               
Cow position:
               
chr13:25817813-25817327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 152
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr13:17994232-17994030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 165
               

               
Conread position:
               
51-322
               

               
Cow position:
               
chr13:37698343-37698059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
51-345
               

               
Cow position:
               
chr13:45353340-45353042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
51-351
               

               
Cow position:
               
chr13:45496965-45497265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 172
               

               
Conread position:
               
51-440
               

               
Cow position:
               
chr13:15234204-15233819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 33
               

               
Conread position:
               
52-250
               

               
Cow position:
               
chr13:711528-711325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
52-360
               

               
Cow position:
               
chr13:7835113-7834793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 292
               

               
Conread position:
               
52-381
               

               
Cow position:
               
chr13:12521487-12521827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
54-299
               

               
Cow position:
               
chr13:51821593-51821847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
44, 183
               

               
Conread position:
               
56-345
               

               
Cow position:
               
chr13:17807114-17806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
30, 288
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr13:60377115-60377415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 245
               

               
Conread position:
               
56-542
               

               
Cow position:
               
chr13:38872682-38873159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
57-299
               

               
Cow position:
               
chr13:38485119-38484874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
57-300
               

               
Cow position:
               
chr13:37497464-37497707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
11, 146
               

               
Conread position:
               
57-360
               

               
Cow position:
               
chr13:20781033-20781348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
29, 248
               

               
Conread position:
               
58-348
               

               
Cow position:
               
chr13:32255835-32256135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr13:18989996-18989655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
31, 174
               

               
Conread position:
               
59-302
               

               
Cow position:
               
chr13:33191206-33190951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
59-559
               

               
Cow position:
               
chr13:8824556-8824060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
30, 162
               

               
Conread position:
               
60-273
               

               
Cow position:
               
chr13:8265763-8265538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 218
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr13:15276428-15276177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
60-412
               

               
Cow position:
               
chr13:13306393-13306015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
60-431
               

               
Cow position:
               
chr13:36352688-36353057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 21
               

               
Conread position:
               
61-273
               

               
Cow position:
               
chr13:27017101-27017314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
61-337
               

               
Cow position:
               
chr13:21194233-21194502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
123, 64
               

               
Conread position:
               
61-559
               

               
Cow position:
               
chr13:12574922-12574404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 220
               

               
Conread position:
               
62-322
               

               
Cow position:
               
chr13:6759503-6759774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr13:32559160-32558904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
66-361
               

               
Cow position:
               
chr13:52097902-52097603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
67-541
               

               
Cow position:
               
chr13:19393565-19393095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 41
               

               
Conread position:
               
68-268
               

               
Cow position:
               
chr13:12605973-12606178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 61
               

               
Conread position:
               
68-411
               

               
Cow position:
               
chr13:51484471-51484834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 260
               

               
Conread position:
               
68-542
               

               
Cow position:
               
chr13:18852353-18851886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 46
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr13:17568406-17568656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
70-348
               

               
Cow position:
               
chr13:12780774-12780485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
16, 274
               

               
Conread position:
               
70-360
               

               
Cow position:
               
chr13:38089774-38090074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 265
               

               
Conread position:
               
70-412
               

               
Cow position:
               
chr13:61047485-61047133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
71-308
               

               
Cow position:
               
chr13:3716264-3716015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
72-348
               

               
Cow position:
               
chr13:16007501-16007214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 272
               

               
Conread position:
               
72-542
               

               
Cow position:
               
chr13:33256773-33256295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 182
               

               
Conread position:
               
73-314
               

               
Cow position:
               
chr13:24539768-24539519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr13:23099983-23099717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 6
               

               
Conread position:
               
73-348
               

               
Cow position:
               
chr13:4531222-4530936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 271
               

               
Conread position:
               
73-350
               

               
Cow position:
               
chr13:23266001-23265722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
73-464
               

               
Cow position:
               
chr13:6079143-6079545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 251
               

               
Conread position:
               
74-360
               

               
Cow position:
               
chr13:39293886-39294188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 270
               

               
Conread position:
               
74-542
               

               
Cow position:
               
chr13:45726154-45725670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
76-233
               

               
Cow position:
               
chr13:22732109-22732269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
57, 18
               

               
Conread position:
               
81-238
               

               
Cow position:
               
chr13:26983883-26983722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
81-323
               

               
Cow position:
               
chr13:1839645-1839401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
116, 163
               

               
Conread position:
               
82-323
               

               
Cow position:
               
chr13:24155806-24155559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
83-559
               

               
Cow position:
               
chr13:6969297-6969784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
50, 148
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr13:14576928-14576773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 48
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr13:38277875-38278071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr13:7749687-7749454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr13:9119850-9120079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 129
               

               
Conread position:
               
84-321
               

               
Cow position:
               
chr13:22115967-22115725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 118
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr13:2217728-2217979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
84-343
               

               
Cow position:
               
chr13:55295364-55295622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 115
               

               
Conread position:
               
84-348
               

               
Cow position:
               
chr13:1341095-1341367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
43, 257
               

               
Conread position:
               
84-359
               

               
Cow position:
               
chr13:7257663-7257378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
45, 193
               

               
Conread position:
               
84-415
               

               
Cow position:
               
chr13:18244117-18243778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
84-431
               

               
Cow position:
               
chr13:60967026-60966669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 108
               

               
Conread position:
               
84-541
               

               
Cow position:
               
chr13:17021458-17021927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 344
               

               
Conread position:
               
84-556
               

               
Cow position:
               
chr13:15041210-15041692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 280
               

               
Conread position:
               
84-559
               

               
Cow position:
               
chr13:18166992-18166511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 130
               

               
Conread position:
               
84-561
               

               
Cow position:
               
chr13:54702452-54701962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
84-563
               

               
Cow position:
               
chr13:5169398-5168909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
84-563
               

               
Cow position:
               
chr13:19023577-19024077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
43, 186
               

               
Conread position:
               
85-249
               

               
Cow position:
               
chr13:46329203-46329374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
85-412
               

               
Cow position:
               
chr13:54381674-54382001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 236
               

               
Conread position:
               
85-542
               

               
Cow position:
               
chr13:21287829-21288287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 136
               

               
Conread position:
               
86-310
               

               
Cow position:
               
chr13:54418490-54418261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
86-559
               

               
Cow position:
               
chr13:57002999-57002500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
38, 295
               

               
Conread position:
               
88-562
               

               
Cow position:
               
chr13:11061243-11060752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
89-348
               

               
Cow position:
               
chr13:19513638-19513373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 197
               

               
Conread position:
               
90-348
               

               
Cow position:
               
chr13:25284481-25284738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
92-542
               

               
Cow position:
               
chr13:25927046-25926586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 209
               

               
Conread position:
               
93-209
               

               
Cow position:
               
chr13:57227961-57227843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-239
               

               
Cow position:
               
chr13:53012132-53012283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
93-239
               

               
Cow position:
               
chr13:58719270-58719417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
93-240
               

               
Cow position:
               
chr13:29671188-29671337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
93-253
               

               
Cow position:
               
chr13:9107828-9107672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
146, 105
               

               
Conread position:
               
93-288
               

               
Cow position:
               
chr13:19556005-19555806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
93-315
               

               
Cow position:
               
chr13:52879665-52879439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
93-318
               

               
Cow position:
               
chr13:7262646-7262416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr13:14227182-14226954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
93-320
               

               
Cow position:
               
chr13:25261552-25261788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
93-322
               

               
Cow position:
               
chr13:9665328-9665081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
93-330
               

               
Cow position:
               
chr13:22780198-22779973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
37, 108
               

               
Conread position:
               
93-351
               

               
Cow position:
               
chr13:46284364-46284630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
93-354
               

               
Cow position:
               
chr13:29631105-29630841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 40
               

               
Conread position:
               
93-395
               

               
Cow position:
               
chr13:4604544-4604237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
93-395
               

               
Cow position:
               
chr13:30693954-30693652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 109
               

               
Conread position:
               
93-421
               

               
Cow position:
               
chr13:11954864-11955207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
200, 32
               

               
Conread position:
               
93-444
               

               
Cow position:
               
chr13:11460876-11460520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 177
               

               
Conread position:
               
93-461
               

               
Cow position:
               
chr13:16343939-16343564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
93-464
               

               
Cow position:
               
chr13:4664608-4664990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 159
               

               
Conread position:
               
93-477
               

               
Cow position:
               
chr13:52285068-52284673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 188
               

               
Conread position:
               
93-488
               

               
Cow position:
               
chr13:23856470-23856052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
93-522
               

               
Cow position:
               
chr13:23479282-23478846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 95
               

               
Conread position:
               
93-542
               

               
Cow position:
               
chr13:3315420-3315888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
93-549
               

               
Cow position:
               
chr13:9246967-9246523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
93-563
               

               
Cow position:
               
chr13:14063275-14063743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 45
               

               
Conread position:
               
93-563
               

               
Cow position:
               
chr13:43594863-43595326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
93-570
               

               
Cow position:
               
chr13:48251739-48252199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
40, 100
               

               
Conread position:
               
94-321
               

               
Cow position:
               
chr13:21904911-21904683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
146, 32
               

               
Conread position:
               
94-332
               

               
Cow position:
               
chr13:60330003-60329763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
94-338
               

               
Cow position:
               
chr13:13563700-13563944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 218
               

               
Conread position:
               
94-466
               

               
Cow position:
               
chr13:5713546-5713182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 112
               

               
Conread position:
               
94-529
               

               
Cow position:
               
chr13:23166845-23167310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
39, 363
               

               
Conread position:
               
94-541
               

               
Cow position:
               
chr13:8195333-8194895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
40, 10
               

               
Conread position:
               
94-554
               

               
Cow position:
               
chr13:20784840-20784380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 178
               

               
Conread position:
               
95-420
               

               
Cow position:
               
chr13:24280499-24280168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 173
               

               
Conread position:
               
96-245
               

               
Cow position:
               
chr13:34299394-34299538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 36
               

               
Conread position:
               
96-260
               

               
Cow position:
               
chr13:30673894-30674063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
96-284
               

               
Cow position:
               
chr13:16155468-16155664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
96-307
               

               
Cow position:
               
chr13:56543449-56543667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 195
               

               
Conread position:
               
96-337
               

               
Cow position:
               
chr13:5658481-5658720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 174
               

               
Conread position:
               
96-346
               

               
Cow position:
               
chr13:21210112-21209854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 15
               

               
Conread position:
               
96-385
               

               
Cow position:
               
chr13:1780085-1779777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
96-431
               

               
Cow position:
               
chr13:40722460-40722807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
96-458
               

               
Cow position:
               
chr13:48037870-48037496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
96-458
               

               
Cow position:
               
chr13:54095054-54094683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
96-542
               

               
Cow position:
               
chr13:37985501-37985950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
34, 221
               

               
Conread position:
               
96-542
               

               
Cow position:
               
chr13:42200868-42200418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 177
               

               
Conread position:
               
96-544
               

               
Cow position:
               
chr13:26261544-26261996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 242
               

               
Conread position:
               
96-563
               

               
Cow position:
               
chr13:15349020-15349474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
96-564
               

               
Cow position:
               
chr13:23960556-23961034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 279
               

               
Conread position:
               
96-564
               

               
Cow position:
               
chr13:35660003-35659530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 244
               

               
Conread position:
               
97-294
               

               
Cow position:
               
chr13:26423785-26423991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr13:12614509-12614273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
97-354
               

               
Cow position:
               
chr13:54969574-54969818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
226, 59
               

               
Conread position:
               
97-423
               

               
Cow position:
               
chr13:61166208-61166542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
97-539
               

               
Cow position:
               
chr13:38012610-38012140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
30, 220
               

               
Conread position:
               
97-559
               

               
Cow position:
               
chr13:19364493-19364022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
97-559
               

               
Cow position:
               
chr13:24715486-24715030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
143, 36
               

               
Conread position:
               
98-308
               

               
Cow position:
               
chr13:52440435-52440221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 194
               

               
Conread position:
               
98-330
               

               
Cow position:
               
chr13:17982037-17981816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
98-331
               

               
Cow position:
               
chr13:8201237-8201472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 149
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr13:60487208-60487547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 321
               

               
Conread position:
               
98-444
               

               
Cow position:
               
chr13:15884766-15885135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
98-458
               

               
Cow position:
               
chr13:53574205-53573842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
98-555
               

               
Cow position:
               
chr13:13501374-13501847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 32
               

               
Conread position:
               
98-563
               

               
Cow position:
               
chr13:17970787-17971270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
98-568
               

               
Cow position:
               
chr13:37069597-37069114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 209
               

               
Conread position:
               
99-330
               

               
Cow position:
               
chr13:24556536-24556295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
99-390
               

               
Cow position:
               
chr13:37521133-37521433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
99-495
               

               
Cow position:
               
chr13:11096415-11096019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
99-542
               

               
Cow position:
               
chr13:60599695-60600138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
34, 106
               

               
Conread position:
               
100-432
               

               
Cow position:
               
chr13:54345023-54344679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 264
               

               
Conread position:
               
100-544
               

               
Cow position:
               
chr13:45022962-45023427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 211
               

               
Conread position:
               
101-318
               

               
Cow position:
               
chr13:54331264-54331043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
32, 189
               

               
Conread position:
               
101-338
               

               
Cow position:
               
chr13:5278943-5279184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
101-384
               

               
Cow position:
               
chr13:20880681-20880981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
101-397
               

               
Cow position:
               
chr13:16024833-16024525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
101-602
               

               
Cow position:
               
chr13:21241847-21242337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
102-323
               

               
Cow position:
               
chr13:26697860-26698087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 145
               

               
Conread position:
               
102-345
               

               
Cow position:
               
chr13:9587340-9587592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 203
               

               
Conread position:
               
102-360
               

               
Cow position:
               
chr13:32736824-32736557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 239
               

               
Conread position:
               
102-461
               

               
Cow position:
               
chr13:8524377-8524742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
102-563
               

               
Cow position:
               
chr13:11808786-11808358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
299, 32
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr13:12283079-12282606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
102-575
               

               
Cow position:
               
chr13:47863455-47863955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 183
               

               
Conread position:
               
103-409
               

               
Cow position:
               
chr13:24376733-24376417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 170
               

               
Conread position:
               
103-482
               

               
Cow position:
               
chr13:12926033-12925628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
28, 321
               

               
Conread position:
               
103-487
               

               
Cow position:
               
chr13:20705960-20706359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 367
               

               
Conread position:
               
103-557
               

               
Cow position:
               
chr13:41154803-41155273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
103-562
               

               
Cow position:
               
chr13:55673962-55674437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 368
               

               
Conread position:
               
104-328
               

               
Cow position:
               
chr13:17612820-17612585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
104-338
               

               
Cow position:
               
chr13:8607277-8607512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
104-541
               

               
Cow position:
               
chr13:15974852-15974417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
104-542
               

               
Cow position:
               
chr13:7076498-7076038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
104-561
               

               
Cow position:
               
chr13:17114138-17114599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 58
               

               
Conread position:
               
105-321
               

               
Cow position:
               
chr13:2462991-2463213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
105-348
               

               
Cow position:
               
chr13:46285553-46285302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 236
               

               
Conread position:
               
105-390
               

               
Cow position:
               
chr13:30510302-30509999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
106-326
               

               
Cow position:
               
chr13:2339669-2339449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
24, 156
               

               
Conread position:
               
106-419
               

               
Cow position:
               
chr13:20466055-20466373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
160, 27
               

               
Conread position:
               
106-461
               

               
Cow position:
               
chr13:13176889-13176521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
106-563
               

               
Cow position:
               
chr13:44323143-44322669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 187
               

               
Conread position:
               
106-573
               

               
Cow position:
               
chr13:37617564-37617079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
108-256
               

               
Cow position:
               
chr13:29122604-29122750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 82
               

               
Conread position:
               
108-431
               

               
Cow position:
               
chr13:6060770-6061108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 191
               

               
Conread position:
               
108-559
               

               
Cow position:
               
chr13:24586285-24585829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 165
               

               
Conread position:
               
109-321
               

               
Cow position:
               
chr13:43184635-43184851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
21, 124
               

               
Conread position:
               
109-515
               

               
Cow position:
               
chr13:25547356-25547761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
110-382
               

               
Cow position:
               
chr13:17816007-17815729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
20, 221
               

               
Conread position:
               
110-557
               

               
Cow position:
               
chr13:55315953-55316440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 370
               

               
Conread position:
               
110-559
               

               
Cow position:
               
chr13:23667498-23667038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 143
               

               
Conread position:
               
111-319
               

               
Cow position:
               
chr13:18551683-18551467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
114-240
               

               
Cow position:
               
chr13:19320981-19320853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
114-377
               

               
Cow position:
               
chr13:54093972-54093700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
114-540
               

               
Cow position:
               
chr13:48528105-48528526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr13:24369817-24369374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 170
               

               
Conread position:
               
114-609
               

               
Cow position:
               
chr13:47963969-47964456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
115-253
               

               
Cow position:
               
chr13:17762842-17762980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 83
               

               
Conread position:
               
115-332
               

               
Cow position:
               
chr13:51108720-51108496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
116-458
               

               
Cow position:
               
chr13:12207273-12206922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
17, 347
               

               
Conread position:
               
116-487
               

               
Cow position:
               
chr13:43868890-43869268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
117-561
               

               
Cow position:
               
chr13:43480290-43479840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
119-487
               

               
Cow position:
               
chr13:17439539-17439922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 296
               

               
Conread position:
               
120-416
               

               
Cow position:
               
chr13:39460013-39459730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
121-337
               

               
Cow position:
               
chr13:20530918-20531143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
123-402
               

               
Cow position:
               
chr13:4464228-4463941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
74, 142
               

               
Conread position:
               
123-451
               

               
Cow position:
               
chr13:45073714-45074034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
189, 61
               

               
Conread position:
               
123-482
               

               
Cow position:
               
chr13:18172561-18172187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 347
               

               
Conread position:
               
124-542
               

               
Cow position:
               
chr13:20509953-20509525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
125-308
               

               
Cow position:
               
chr13:22025482-22025675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
125-547
               

               
Cow position:
               
chr13:48165209-48165630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
126-271
               

               
Cow position:
               
chr13:13465572-13465718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
126-301
               

               
Cow position:
               
chr13:36877290-36877113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
126-314
               

               
Cow position:
               
chr13:11767823-11768014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:6975572-6975771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 171
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:9884986-9884788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 138
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:20041743-20041947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 179
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:30026330-30026133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
115, 83
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:43812302-43812106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 146
               

               
Conread position:
               
126-321
               

               
Cow position:
               
chr13:43839327-43839523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 150
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr13:52199307-52199106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 62
               

               
Conread position:
               
126-329
               

               
Cow position:
               
chr13:6894312-6894105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
126-331
               

               
Cow position:
               
chr13:20536718-20536512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 62
               

               
Conread position:
               
126-338
               

               
Cow position:
               
chr13:18491812-18491605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
114, 34
               

               
Conread position:
               
126-351
               

               
Cow position:
               
chr13:17347025-17346794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
126-400
               

               
Cow position:
               
chr13:37795652-37795391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
213, 64
               

               
Conread position:
               
126-451
               

               
Cow position:
               
chr13:12202583-12202242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
126-461
               

               
Cow position:
               
chr13:20839785-20839436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
126-477
               

               
Cow position:
               
chr13:15281719-15282082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 14
               

               
Conread position:
               
126-528
               

               
Cow position:
               
chr13:17004374-17004788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr13:5263068-5263481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
54, 147
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr13:7059693-7059256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
75, 313
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr13:15192676-15193090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
189, 72
               

               
Conread position:
               
126-560
               

               
Cow position:
               
chr13:19033764-19033333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
142, 63
               

               
Conread position:
               
126-561
               

               
Cow position:
               
chr13:17745457-17745037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
75, 144
               

               
Conread position:
               
128-355
               

               
Cow position:
               
chr13:8245116-8245347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
128-540
               

               
Cow position:
               
chr13:37521516-37521949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 193
               

               
Conread position:
               
128-542
               

               
Cow position:
               
chr13:37804095-37803677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 43
               

               
Conread position:
               
130-444
               

               
Cow position:
               
chr13:15528817-15529150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
132-364
               

               
Cow position:
               
chr13:2192920-2192681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 77
               

               
Conread position:
               
132-412
               

               
Cow position:
               
chr13:60341026-60340725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
73, 181
               

               
Conread position:
               
132-415
               

               
Cow position:
               
chr13:53195080-53195365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
110, 64
               

               
Conread position:
               
132-429
               

               
Cow position:
               
chr13:52227888-52228198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
69, 80
               

               
Conread position:
               
132-540
               

               
Cow position:
               
chr13:15257166-15257567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 116
               

               
Conread position:
               
134-534
               

               
Cow position:
               
chr13:51014970-51015378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
67, 211
               

               
Conread position:
               
134-563
               

               
Cow position:
               
chr13:33054185-33054599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
136-320
               

               
Cow position:
               
chr13:11147514-11147324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
138-412
               

               
Cow position:
               
chr13:9643676-9643968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
138-540
               

               
Cow position:
               
chr13:19022484-19022064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
138-541
               

               
Cow position:
               
chr13:37818551-37818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
138-542
               

               
Cow position:
               
chr13:46112173-46111766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
107, 65
               

               
Conread position:
               
138-582
               

               
Cow position:
               
chr13:20679551-20679087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 53
               

               
Conread position:
               
141-542
               

               
Cow position:
               
chr13:52749285-52749665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 19
               

               
Conread position:
               
142-426
               

               
Cow position:
               
chr13:9593709-9593410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
142-538
               

               
Cow position:
               
chr13:37592736-37593144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
58, 313
               

               
Conread position:
               
142-548
               

               
Cow position:
               
chr13:19223851-19223443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
70, 189
               

               
Conread position:
               
143-311
               

               
Cow position:
               
chr13:60393498-60393670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
143-486
               

               
Cow position:
               
chr13:547689-547342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
143-487
               

               
Cow position:
               
chr13:61990133-61990476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
69, 231
               

               
Conread position:
               
143-534
               

               
Cow position:
               
chr13:61188736-61188334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
143-542
               

               
Cow position:
               
chr13:48598105-48597707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
97, 49
               

               
Conread position:
               
145-432
               

               
Cow position:
               
chr13:23512558-23512269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
145-487
               

               
Cow position:
               
chr13:26369725-26369370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 326
               

               
Conread position:
               
147-431
               

               
Cow position:
               
chr13:8652240-8652542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
148-542
               

               
Cow position:
               
chr13:52055396-52055795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 125
               

               
Conread position:
               
152-322
               

               
Cow position:
               
chr13:5079033-5079204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
153-559
               

               
Cow position:
               
chr13:15991031-15991449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
48, 217
               

               
Conread position:
               
154-561
               

               
Cow position:
               
chr13:15195019-15195421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
155-487
               

               
Cow position:
               
chr13:14771650-14771296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 297
               

               
Conread position:
               
157-492
               

               
Cow position:
               
chr13:2404930-2404604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
39, 160
               

               
Conread position:
               
157-606
               

               
Cow position:
               
chr13:55583386-55582932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
55, 243
               

               
Conread position:
               
159-400
               

               
Cow position:
               
chr13:12618924-12619182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
159-542
               

               
Cow position:
               
chr13:47186409-47186028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
43, 158
               

               
Conread position:
               
159-563
               

               
Cow position:
               
chr13:5671416-5671808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
159, 25
               

               
Conread position:
               
161-322
               

               
Cow position:
               
chr13:21189464-21189297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
49, 103
               

               
Conread position:
               
161-488
               

               
Cow position:
               
chr13:5082837-5082494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
49, 93
               

               
Conread position:
               
161-563
               

               
Cow position:
               
chr13:49503345-49503761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
162-550
               

               
Cow position:
               
chr13:19188486-19188082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 289
               

               
Conread position:
               
163-473
               

               
Cow position:
               
chr13:5758164-5758483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
166-431
               

               
Cow position:
               
chr13:966255-966000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 97
               

               
Conread position:
               
166-563
               

               
Cow position:
               
chr13:49022692-49023089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 109
               

               
Conread position:
               
167-444
               

               
Cow position:
               
chr13:15110501-15110201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
168-563
               

               
Cow position:
               
chr13:607085-607490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
172-361
               

               
Cow position:
               
chr13:28652970-28652773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
176-336
               

               
Cow position:
               
chr13:7790182-7790021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
176-366
               

               
Cow position:
               
chr13:22030256-22030063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
176-541
               

               
Cow position:
               
chr13:18697008-18696622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 66
               

               
Conread position:
               
176-542
               

               
Cow position:
               
chr13:20157896-20157527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 200
               

               
Conread position:
               
177-652
               

               
Cow position:
               
chr13:20473520-20473983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
140, 37
               

               
Conread position:
               
179-451
               

               
Cow position:
               
chr13:15903182-15902904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
183-557
               

               
Cow position:
               
chr13:54583042-54582657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 290
               

               
Conread position:
               
196-444
               

               
Cow position:
               
chr13:17966063-17966323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-557
               

               
Cow position:
               
chr13:18058104-18058464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr13:8374627-8374980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
124, 247
               

               
Conread position:
               
197-563
               

               
Cow position:
               
chr13:26698352-26698724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
65, 212
               

               
Conread position:
               
197-563
               

               
Cow position:
               
chr13:54388876-54389239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
118, 27
               

               
Conread position:
               
197-564
               

               
Cow position:
               
chr13:17568954-17569324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
40, 184
               

               
Conread position:
               
199-478
               

               
Cow position:
               
chr13:11381579-11381871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
122, 87
               

               
Conread position:
               
199-542
               

               
Cow position:
               
chr13:20360413-20360073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
201-431
               

               
Cow position:
               
chr13:48375504-48375733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
155, 109
               

               
Conread position:
               
205-392
               

               
Cow position:
               
chr13:10098854-10099047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
205-487
               

               
Cow position:
               
chr13:51115891-51116180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 255
               

               
Conread position:
               
205-544
               

               
Cow position:
               
chr13:20288466-20288134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
212-487
               

               
Cow position:
               
chr13:6389510-6389238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 142
               

               
Conread position:
               
214-451
               

               
Cow position:
               
chr13:15144244-15144485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
214-542
               

               
Cow position:
               
chr13:20217260-20217600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
35, 250
               

               
Conread position:
               
217-557
               

               
Cow position:
               
chr13:60375363-60375705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
106, 186
               

               
Conread position:
               
221-443
               

               
Cow position:
               
chr13:34555711-34555940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
223-561
               

               
Cow position:
               
chr13:14576325-14575992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 63
               

               
Conread position:
               
224-542
               

               
Cow position:
               
chr13:21135782-21136114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
95, 256
               

               
Conread position:
               
228-475
               

               
Cow position:
               
chr13:8402169-8401914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
231-476
               

               
Cow position:
               
chr13:19320646-19320387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
231-550
               

               
Cow position:
               
chr13:19279202-19278885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
237-562
               

               
Cow position:
               
chr13:12974907-12974590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
164, 18
               

               
Conread position:
               
247-576
               

               
Cow position:
               
chr13:18197508-18197846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 20
               

               
Conread position:
               
271-557
               

               
Cow position:
               
chr13:15757191-15756899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
272-542
               

               
Cow position:
               
chr13:36877121-36876863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
129, 187
               

               
Conread position:
               
272-559
               

               
Cow position:
               
chr13:52880813-52881102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
282-581
               

               
Cow position:
               
chr13:11103131-11103449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 229
               

               
Conread position:
               
283-563
               

               
Cow position:
               
chr13:41549728-41550027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
287-559
               

               
Cow position:
               
chr13:21170584-21170306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 187
               

               
Conread position:
               
308-557
               

               
Cow position:
               
chr13:37614166-37614415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
316-542
               

               
Cow position:
               
chr13:8350341-8350100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
316-542
               

               
Cow position:
               
chr13:45439540-45439330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
316-559
               

               
Cow position:
               
chr13:37621345-37621596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
144, 9
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr13:20314615-20314827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
74, 130
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr13:21171563-21171774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 134
               

               
Conread position:
               
326-548
               

               
Cow position:
               
chr13:35557104-35557319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
326-557
               

               
Cow position:
               
chr13:28440531-28440751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
218, 74
               

               
Conread position:
               
326-563
               

               
Cow position:
               
chr13:3209314-3209546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 11
               

               
Conread position:
               
332-541
               

               
Cow position:
               
chr13:8450331-8450132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 90
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr13:33854699-33854883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
348-558
               

               
Cow position:
               
chr13:53850809-53850602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
375-557
               

               
Cow position:
               
chr13:28081680-28081499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 83
               
Show alignments to all cow chromosomes.