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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8003H20.3
        

               
Conread position:
               
1-115
               

               
Cow position:
               
chr17:23884090-23883973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr17:28830962-28831089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr17:484307-484448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr17:34208437-34208286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-151
               

               
Cow position:
               
chr17:24946876-24946723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr17:19765946-19766117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
88, 59
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr17:42258584-42258760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr17:30727952-30728148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 46
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr17:242022-242229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr17:17240287-17240065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
84, 199
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr17:22773653-22773442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr17:3549492-3549274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 166
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr17:39208991-39208781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:20858359-20858149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:21807130-21806911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:22135177-22135388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
126, 140
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr17:25344262-25344049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr17:9660599-9660381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr17:34153869-34154093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 123
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr17:1105227-1105454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 134
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr17:20507857-20507618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr17:21421006-21421231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr17:33370533-33370289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr17:22057495-22057251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr17:26476829-26477074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr17:13708455-13708683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr17:21363089-21363331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 87
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr17:2151871-2152115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr17:9753477-9753718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:40405985-40406241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr17:1025971-1026217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr17:25947126-25946853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-272
               

               
Cow position:
               
chr17:18569217-18568964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr17:14265875-14265596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr17:20358557-20358833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 6
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr17:43527661-43527943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 45
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr17:20083834-20083545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 204
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr17:27679566-27679255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr17:3498986-3498679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
1-306
               

               
Cow position:
               
chr17:25167991-25168309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr17:6566157-6566461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr17:13409674-13409360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 73
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr17:34628807-34628482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr17:27667516-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr17:20093446-20093134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr17:21680446-21680770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 215
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:3843170-3843486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:5042004-5041676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
59, 155
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:5997424-5997093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:11056698-11056364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr17:24549847-24550183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr17:19455616-19455305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr17:25542134-25541814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 253
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr17:25590546-25590228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 39
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr17:25755462-25755799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr17:42398113-42398443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr17:16895616-16895297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
88, 173
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr17:21707324-21707001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr17:1654003-1653675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr17:6123512-6123853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr17:21874638-21874291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 185
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr17:23337336-23337004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 243
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr17:33271995-33271666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr17:11304712-11305046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
88, 248
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr17:19998814-19999155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr17:27305841-27306178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr17:5255694-5255354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr17:5896234-5895890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 278
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr17:26182900-26183246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 207
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:8993612-8993254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 282
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr17:21439561-21439919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 343
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr17:7560000-7559637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
92, 281
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr17:18494844-18494482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
44, 161
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr17:28130362-28130007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-353
               

               
Cow position:
               
chr17:27698014-27697661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 166
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr17:4299304-4299659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr17:5695264-5694897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 102
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr17:25145632-25145269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
81, 217
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr17:10649527-10649886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 200
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr17:12059415-12059035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 56
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr17:3131739-3132110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr17:43826556-43826191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
303, 197
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr17:11386194-11386587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 234
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr17:4601864-4601452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 9
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr17:20233905-20234316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 178
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr17:18490214-18490647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 174
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr17:29472160-29472573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr17:18861040-18860613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 113
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr17:32651294-32651725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr17:28539721-28540139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr17:1568491-1568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 74
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr17:39735864-39736313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 201
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chr17:21495055-21495513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 148
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr17:18592115-18592595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr17:26764695-26765176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 310
               

               
Conread position:
               
1-459
               

               
Cow position:
               
chr17:13144004-13143553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr17:24580603-24580139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr17:41029630-41030095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 307
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr17:979456-979009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 132
               

               
Conread position:
               
1-485
               

               
Cow position:
               
chr17:1410568-1410059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 471
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr17:29157108-29157597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr17:36265555-36265020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 175
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr17:24883885-24883343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr17:25608828-25608290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 363
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr17:27795326-27795882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:5280964-5280421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 167
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:5730602-5731147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 204
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:9853664-9854211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 274
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:11397348-11397896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 127
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:16446753-16446197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:26514393-26514944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 277
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr17:32138719-32138187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 175
               

               
Conread position:
               
1-544
               

               
Cow position:
               
chr17:15300186-15299619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 82
               

               
Conread position:
               
1-550
               

               
Cow position:
               
chr17:29292690-29292142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 240
               

               
Conread position:
               
1-555
               

               
Cow position:
               
chr17:24553683-24554264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr17:11839379-11839968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
1-558
               

               
Cow position:
               
chr17:42419416-42419954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 103
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr17:11035600-11036161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 291
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr17:11382037-11381479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr17:20848214-20848769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr17:29715508-29714968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 264
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr17:32027784-32027200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 483
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr17:33288976-33288411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 257
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr17:12929865-12929281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
78, 462
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr17:15188397-15187820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 119
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:12289741-12289160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 265
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:15103201-15102639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 6
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:18201455-18202012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 181
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:20800494-20801064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:21960000-21959431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:21973453-21972874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 451
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:24077084-24077647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 158
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:26230617-26231216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 430
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr17:29083884-29084418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr17:20993362-20992785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr17:25188961-25189542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 366
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr17:32989171-32989727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 189
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr17:32993935-32993372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 189
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr17:40771507-40772087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr17:11216202-11215634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 190
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr17:25815286-25815851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 193
               

               
Conread position:
               
1-579
               

               
Cow position:
               
chr17:24823942-24824513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 117
               

               
Conread position:
               
1-634
               

               
Cow position:
               
chr17:22563873-22564501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
2-123
               

               
Cow position:
               
chr17:20912299-20912423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
2-194
               

               
Cow position:
               
chr17:38829763-38829959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr17:2270447-2270647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr17:18553921-18553721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr17:23723556-23723776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr17:42283910-42283706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
2-216
               

               
Cow position:
               
chr17:2730119-2729897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr17:7700126-7700349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr17:22790777-22791001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
87, 144
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr17:23517488-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr17:41919728-41919970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr17:6082226-6082467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr17:8644716-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr17:16117752-16117458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 79
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr17:3386976-3387256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 166
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr17:20815037-20815371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 288
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr17:3139517-3139843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 214
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr17:35184713-35185048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
87, 306
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr17:32365965-32366304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 137
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr17:23803145-23803490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
82, 159
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr17:10271180-10271532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 123
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr17:3306549-3306931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 5
               

               
Conread position:
               
2-392
               

               
Cow position:
               
chr17:11375010-11374620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 162
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr17:6155720-6156138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 205
               

               
Conread position:
               
2-421
               

               
Cow position:
               
chr17:26084716-26085140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 26
               

               
Conread position:
               
2-431
               

               
Cow position:
               
chr17:9564989-9565427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr17:6936977-6936429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
2-572
               

               
Cow position:
               
chr17:23101528-23100963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 89
               

               
Conread position:
               
3-112
               

               
Cow position:
               
chr17:2202028-2202140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr17:1537043-1537171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr17:16876085-16876216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr17:19925395-19925265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr17:4107336-4107179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr17:4123072-4122914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr17:20271676-20271510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 137
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr17:31671169-31670992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
3-202
               

               
Cow position:
               
chr17:1456556-1456350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr17:35020998-35020802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr17:15894627-15894426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 133
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr17:34191252-34191043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:77035-76821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:184877-185091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:3651996-3651790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:5638161-5637947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:6180686-6180899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 121
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:9818210-9817996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:15118547-15118761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:23320690-23320480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:24978789-24979003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:26829015-26828801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:30816197-30815983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:31077061-31077274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:42026216-42026430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr17:43539734-43539948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr17:3371129-3371351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr17:18266742-18266973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 82
               

               
Conread position:
               
3-225
               

               
Cow position:
               
chr17:4155286-4155513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr17:2274954-2275181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 203
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr17:11913020-11912788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr17:16463434-16463198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
86, 163
               

               
Conread position:
               
3-229
               

               
Cow position:
               
chr17:35287663-35287433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 223
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr17:11638566-11638789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
88, 150
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr17:10512209-10511964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 165
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr17:3154089-3153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr17:8492669-8492424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 24
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr17:40802492-40802736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 198
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr17:9663022-9662754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr17:12657962-12657696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
81, 259
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr17:20546868-20547136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr17:42843732-42844003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr17:43725832-43725562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr17:21871055-21870789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
59, 82
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr17:399884-399609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr17:15319022-15319297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr17:9897597-9897860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
202, 91
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr17:17266667-17266391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr17:25077145-25076872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-271
               

               
Cow position:
               
chr17:24503530-24503809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr17:19377420-19377131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr17:35388334-35388044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
3-297
               

               
Cow position:
               
chr17:15893584-15893887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
85, 259
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr17:26771674-26771375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
81, 186
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr17:5541891-5541582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr17:7396563-7396252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr17:1463839-1464152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 288
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr17:20361076-20360764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
83, 261
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr17:36504347-36504039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr17:14231872-14231564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
106, 260
               

               
Conread position:
               
3-305
               

               
Cow position:
               
chr17:19214679-19214366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 194
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr17:4152543-4152227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:8804046-8803742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
127, 91
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:13966773-13966456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:17494021-17494338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:20006238-20006552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 160
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:20987920-20987603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:22226579-22226263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
86, 260
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:22248522-22248205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:26822775-26823092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:28024161-28023844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr17:25844419-25844739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
3-310
               

               
Cow position:
               
chr17:17452935-17452610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
3-314
               

               
Cow position:
               
chr17:20591902-20592229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr17:29074661-29074338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 277
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr17:37528017-37527688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:8213968-8214300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:10249839-10250178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:14021739-14021411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
139, 80
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:18777110-18776784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 310
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:21926390-21926714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:24786065-24786394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 295
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:27791064-27790732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr17:34005557-34005229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr17:15243821-15243483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 289
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr17:1708023-1707690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 178
               

               
Conread position:
               
3-328
               

               
Cow position:
               
chr17:6858712-6858373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr17:11677506-11677167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr17:11786654-11786993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr17:12357233-12356896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
84, 163
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr17:31532041-31532381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr17:32457900-32457553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 165
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr17:17128824-17129170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
3-342
               

               
Cow position:
               
chr17:36197301-36197652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr17:24095033-24094679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr17:13999325-13998972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr17:16699746-16699399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr17:21660035-21659687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr17:30225079-30224726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr17:36413304-36412951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:3743894-3744250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:5174439-5174083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:5805760-5805404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:5809926-5809570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 342
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:6145490-6145846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:6612753-6613109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:7585150-7585503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 258
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:10008884-10008528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:10025720-10025364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:10354382-10354026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:12856982-12857338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:14239755-14239399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:14932208-14931855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
83, 141
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:15293855-15293499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 323
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:16874315-16874671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:17259958-17260314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:18564079-18563726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 246
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:19370727-19370371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:20226330-20226685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 279
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:20232051-20231695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:21212357-21212001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:21716465-21716109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:25195423-25195779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:27863838-27864194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:27986156-27985800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:34565077-34565433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:38837249-38837600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 106
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:39823463-39823107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr17:39844361-39844717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr17:21182228-21182585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-351
               

               
Cow position:
               
chr17:26870585-26870232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:2265919-2266288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:4176943-4176571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
81, 291
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:5548820-5548451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:6956370-6956741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
83, 343
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:8673789-8674143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 184
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:9914288-9914657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:10254627-10254996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:14212290-14211920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
68, 342
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:17958327-17958692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 276
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:19317644-19318013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:20391505-20391874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:29824229-29823868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:33058878-33058510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 333
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:34235519-34235150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr17:35437774-35438143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
83, 337
               

               
Conread position:
               
3-385
               

               
Cow position:
               
chr17:5733753-5733390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
126, 81
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr17:139346-139769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr17:14050512-14050100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 114
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr17:21336017-21335585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr17:31986470-31986047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 403
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr17:923560-923989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr17:17060992-17060559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
3-439
               

               
Cow position:
               
chr17:25835148-25835587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-473
               

               
Cow position:
               
chr17:5767581-5768072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
3-487
               

               
Cow position:
               
chr17:40289320-40288815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 310
               

               
Conread position:
               
3-494
               

               
Cow position:
               
chr17:3683977-3683485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 183
               

               
Conread position:
               
3-540
               

               
Cow position:
               
chr17:7821353-7820798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 91
               

               
Conread position:
               
3-540
               

               
Cow position:
               
chr17:36331282-36330740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 55
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr17:43717628-43717111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
3-549
               

               
Cow position:
               
chr17:14033967-14033405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 450
               

               
Conread position:
               
3-560
               

               
Cow position:
               
chr17:44924495-44923952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 186
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr17:11102103-11101568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr17:20780199-20780774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 24
               

               
Conread position:
               
3-605
               

               
Cow position:
               
chr17:20022837-20022214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 471
               

               
Conread position:
               
4-151
               

               
Cow position:
               
chr17:39257334-39257184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr17:9936478-9936257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
19, 166
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr17:9748451-9748684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
84, 201
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr17:17983093-17982856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
6, 121
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr17:20269294-20269540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr17:255757-256057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 95
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr17:31174-31490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr17:30204339-30204655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr17:34595625-34595944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr17:1061377-1061053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 80
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr17:10473516-10473854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 124
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr17:1970885-1971241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 341
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr17:1312853-1313281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 164
               

               
Conread position:
               
4-451
               

               
Cow position:
               
chr17:5000895-5000442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 5
               

               
Conread position:
               
4-464
               

               
Cow position:
               
chr17:8690770-8690295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 27
               

               
Conread position:
               
4-488
               

               
Cow position:
               
chr17:4213438-4213927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 211
               

               
Conread position:
               
4-491
               

               
Cow position:
               
chr17:1493475-1492961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr17:11767855-11768106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
5, 156
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr17:40642408-40642097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr17:2034232-2034622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 96
               

               
Conread position:
               
6-219
               

               
Cow position:
               
chr17:30806020-30805802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
6-244
               

               
Cow position:
               
chr17:34883088-34882847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 177
               

               
Conread position:
               
6-260
               

               
Cow position:
               
chr17:18410842-18410576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
6-276
               

               
Cow position:
               
chr17:15040722-15040440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
6-568
               

               
Cow position:
               
chr17:3388546-3389095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr17:3095516-3095751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
127, 24
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr17:13410547-13410306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr17:13237037-13236800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
119, 60
               

               
Conread position:
               
7-542
               

               
Cow position:
               
chr17:33934062-33933519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 200
               

               
Conread position:
               
8-128
               

               
Cow position:
               
chr17:12539193-12539072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr17:27053456-27053698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 95
               

               
Conread position:
               
8-244
               

               
Cow position:
               
chr17:11747321-11747088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 77
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr17:34079413-34078863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 214
               

               
Conread position:
               
9-112
               

               
Cow position:
               
chr17:21767617-21767723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-131
               

               
Cow position:
               
chr17:2249766-2249642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr17:26344153-26343968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
9-189
               

               
Cow position:
               
chr17:29450173-29449985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr17:38788541-38788352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 174
               

               
Conread position:
               
9-194
               

               
Cow position:
               
chr17:38799783-38799593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr17:19484763-19484569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-199
               

               
Cow position:
               
chr17:34847398-34847204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr17:18070475-18070669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr17:27580357-27580556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
52, 117
               

               
Conread position:
               
9-212
               

               
Cow position:
               
chr17:28155622-28155414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr17:9903623-9903828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
72, 125
               

               
Conread position:
               
9-216
               

               
Cow position:
               
chr17:28169234-28169445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 193
               

               
Conread position:
               
9-224
               

               
Cow position:
               
chr17:18138681-18138904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 152
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr17:40701357-40701582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 219
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr17:5748114-5747869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr17:31310543-31310297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 179
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr17:20695919-20696165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr17:18627914-18628160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr17:34390875-34390619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-257
               

               
Cow position:
               
chr17:26174635-26174889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
9-259
               

               
Cow position:
               
chr17:36313945-36314182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
9-259
               

               
Cow position:
               
chr17:36318000-36318237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr17:43992221-43992484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr17:14008163-14008438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr17:18036301-18036030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
9-272
               

               
Cow position:
               
chr17:4330327-4330588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
48, 21
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr17:2517153-2516845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr17:2520372-2520064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
80, 207
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr17:40368610-40368919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
80, 285
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr17:5553778-5553458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
117, 238
               

               
Conread position:
               
9-326
               

               
Cow position:
               
chr17:148643-148974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
9-329
               

               
Cow position:
               
chr17:15363875-15363548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
81, 10
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr17:16399111-16398778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr17:20361550-20361881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
9-335
               

               
Cow position:
               
chr17:43142034-43141694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
82, 272
               

               
Conread position:
               
9-344
               

               
Cow position:
               
chr17:43178103-43177786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 96
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr17:16505009-16504662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
77, 332
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr17:17032934-17032584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 335
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr17:36284998-36285348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 335
               

               
Conread position:
               
9-353
               

               
Cow position:
               
chr17:242325-242676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 101
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr17:15329015-15329381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-409
               

               
Cow position:
               
chr17:20082096-20081694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
9-411
               

               
Cow position:
               
chr17:37342787-37342381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
9-412
               

               
Cow position:
               
chr17:18099352-18098937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 159
               

               
Conread position:
               
9-415
               

               
Cow position:
               
chr17:30539563-30539156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 194
               

               
Conread position:
               
9-416
               

               
Cow position:
               
chr17:3781722-3782154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 294
               

               
Conread position:
               
9-431
               

               
Cow position:
               
chr17:38832730-38833169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
9-515
               

               
Cow position:
               
chr17:30664965-30665474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 56
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr17:13940633-13940089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 73
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr17:25900885-25901437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
9-558
               

               
Cow position:
               
chr17:40393714-40394264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
9-559
               

               
Cow position:
               
chr17:5898840-5898273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr17:14026229-14025659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 148
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr17:17179726-17180295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr17:23063400-23063971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 400
               

               
Conread position:
               
9-568
               

               
Cow position:
               
chr17:20033227-20032653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
9-579
               

               
Cow position:
               
chr17:21293359-21292767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 197
               

               
Conread position:
               
10-114
               

               
Cow position:
               
chr17:32977511-32977404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
10-205
               

               
Cow position:
               
chr17:29919868-29919669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 172
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr17:15854477-15854679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr17:6072265-6072470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr17:30753364-30753159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
10-210
               

               
Cow position:
               
chr17:40854517-40854713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
10-215
               

               
Cow position:
               
chr17:4634928-4634720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr17:20855367-20855593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr17:35439782-35439555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
10-238
               

               
Cow position:
               
chr17:17383834-17384061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
10-239
               

               
Cow position:
               
chr17:24983658-24983427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
202, 50
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr17:21038966-21039233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
10-273
               

               
Cow position:
               
chr17:1482039-1482310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
120, 231
               

               
Conread position:
               
10-276
               

               
Cow position:
               
chr17:9175996-9175728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 204
               

               
Conread position:
               
10-284
               

               
Cow position:
               
chr17:20129366-20129635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr17:5281614-5281308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr17:11471591-11471897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr17:19266719-19266417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:3196899-3196597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 226
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:6263595-6263905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:8223441-8223749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:13725999-13726306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 278
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:15439527-15439837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 277
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:18312194-18312498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:20303783-20304090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:24026247-24025929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr17:29951230-29951537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 294
               

               
Conread position:
               
10-321
               

               
Cow position:
               
chr17:4606659-4606962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
10-321
               

               
Cow position:
               
chr17:5246572-5246898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
10-326
               

               
Cow position:
               
chr17:36499891-36499565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-330
               

               
Cow position:
               
chr17:39412810-39412484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
10-337
               

               
Cow position:
               
chr17:3138892-3138574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 115
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr17:29364491-29364839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr17:16854370-16854006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr17:32399834-32399470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
10-405
               

               
Cow position:
               
chr17:37693800-37694200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 199
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr17:2584388-2584806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
141, 84
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr17:14901612-14902038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-458
               

               
Cow position:
               
chr17:5900075-5900522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
10-487
               

               
Cow position:
               
chr17:9117335-9117830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr17:13922165-13922711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 84
               

               
Conread position:
               
10-551
               

               
Cow position:
               
chr17:2810303-2810871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
10-559
               

               
Cow position:
               
chr17:10529054-10528484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 434
               

               
Conread position:
               
10-559
               

               
Cow position:
               
chr17:25875096-25875641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr17:14003516-14004072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
10-563
               

               
Cow position:
               
chr17:11618267-11618834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 229
               

               
Conread position:
               
10-563
               

               
Cow position:
               
chr17:22775079-22775620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 115
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr17:588159-587926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr17:13935424-13935191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr17:27685757-27685526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 74
               

               
Conread position:
               
11-307
               

               
Cow position:
               
chr17:39790374-39790689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
73, 184
               

               
Conread position:
               
11-310
               

               
Cow position:
               
chr17:34317029-34316714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 250
               

               
Conread position:
               
11-319
               

               
Cow position:
               
chr17:41394021-41393710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 56
               

               
Conread position:
               
11-331
               

               
Cow position:
               
chr17:1710082-1710398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 202
               

               
Conread position:
               
11-331
               

               
Cow position:
               
chr17:41400281-41399956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr17:39857106-39857506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 53
               

               
Conread position:
               
11-427
               

               
Cow position:
               
chr17:40421357-40421793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 297
               

               
Conread position:
               
12-204
               

               
Cow position:
               
chr17:12024040-12023852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
121, 82
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr17:2006393-2006615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 99
               

               
Conread position:
               
12-238
               

               
Cow position:
               
chr17:36746623-36746403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
114, 80
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr17:20653212-20652969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 168
               

               
Conread position:
               
12-245
               

               
Cow position:
               
chr17:31798492-31798747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
12-344
               

               
Cow position:
               
chr17:3156596-3156940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
12-348
               

               
Cow position:
               
chr17:6065407-6065754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 332
               

               
Conread position:
               
12-352
               

               
Cow position:
               
chr17:35233794-35234139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
70, 210
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr17:29276921-29277338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
12-581
               

               
Cow position:
               
chr17:17222034-17222612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
14-207
               

               
Cow position:
               
chr17:7128871-7129058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 35
               

               
Conread position:
               
14-253
               

               
Cow position:
               
chr17:14304024-14303790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
14-254
               

               
Cow position:
               
chr17:15187558-15187318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
14-442
               

               
Cow position:
               
chr17:30718725-30718281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 298
               

               
Conread position:
               
14-561
               

               
Cow position:
               
chr17:30529845-30529298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
15-348
               

               
Cow position:
               
chr17:10318823-10319167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 329
               

               
Conread position:
               
15-348
               

               
Cow position:
               
chr17:18337991-18337647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 329
               

               
Conread position:
               
17-210
               

               
Cow position:
               
chr17:35457342-35457540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr17:18764376-18764136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
70, 167
               

               
Conread position:
               
17-337
               

               
Cow position:
               
chr17:17121370-17121691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 190
               

               
Conread position:
               
17-544
               

               
Cow position:
               
chr17:20090924-20090398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
19-179
               

               
Cow position:
               
chr17:17381660-17381488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
20-205
               

               
Cow position:
               
chr17:19906780-19906969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 144
               

               
Conread position:
               
20-209
               

               
Cow position:
               
chr17:8123025-8122829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 31
               

               
Conread position:
               
20-266
               

               
Cow position:
               
chr17:13871247-13871505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
20-287
               

               
Cow position:
               
chr17:34017271-34016993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
64, 262
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr17:11171493-11171787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 245
               

               
Conread position:
               
20-318
               

               
Cow position:
               
chr17:40892851-40893151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 107
               

               
Conread position:
               
20-320
               

               
Cow position:
               
chr17:15985056-15985355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
20-321
               

               
Cow position:
               
chr17:1295874-1295563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr17:23880130-23879821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
60, 260
               

               
Conread position:
               
20-329
               

               
Cow position:
               
chr17:22087363-22087684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
20-330
               

               
Cow position:
               
chr17:20824628-20824305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
69, 117
               

               
Conread position:
               
20-415
               

               
Cow position:
               
chr17:7251742-7252145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 38
               

               
Conread position:
               
20-474
               

               
Cow position:
               
chr17:17405819-17406304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
20-542
               

               
Cow position:
               
chr17:40312429-40312928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
20-557
               

               
Cow position:
               
chr17:40331466-40332023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 113
               

               
Conread position:
               
21-421
               

               
Cow position:
               
chr17:25181448-25181032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
22-156
               

               
Cow position:
               
chr17:18146026-18145885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
22-244
               

               
Cow position:
               
chr17:20874024-20874246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
22-360
               

               
Cow position:
               
chr17:13278713-13278364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 317
               

               
Conread position:
               
22-412
               

               
Cow position:
               
chr17:20889074-20889478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 244
               

               
Conread position:
               
22-412
               

               
Cow position:
               
chr17:43008417-43008829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
23-331
               

               
Cow position:
               
chr17:5224103-5224414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
23-559
               

               
Cow position:
               
chr17:38614660-38615209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
23-621
               

               
Cow position:
               
chr17:24973650-24974246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 310
               

               
Conread position:
               
24-563
               

               
Cow position:
               
chr17:15664370-15664927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 402
               

               
Conread position:
               
25-272
               

               
Cow position:
               
chr17:35232297-35232057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
117, 69
               

               
Conread position:
               
25-321
               

               
Cow position:
               
chr17:21313113-21312804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
66, 199
               

               
Conread position:
               
25-435
               

               
Cow position:
               
chr17:5688645-5688233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 160
               

               
Conread position:
               
25-513
               

               
Cow position:
               
chr17:18109384-18108886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 390
               

               
Conread position:
               
25-543
               

               
Cow position:
               
chr17:28285317-28284806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chr17:32133230-32133413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
26-268
               

               
Cow position:
               
chr17:4339353-4339103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
27-237
               

               
Cow position:
               
chr17:27069188-27069403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
27-357
               

               
Cow position:
               
chr17:12216367-12216033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 52
               

               
Conread position:
               
28-357
               

               
Cow position:
               
chr17:33291092-33290774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
102, 61
               

               
Conread position:
               
30-240
               

               
Cow position:
               
chr17:16869570-16869353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 193
               

               
Conread position:
               
31-542
               

               
Cow position:
               
chr17:13244312-13243825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
99, 37
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr17:13458109-13457926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-212
               

               
Cow position:
               
chr17:15352783-15352972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-304
               

               
Cow position:
               
chr17:15225852-15225571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr17:6801310-6800983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
54, 312
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr17:15910261-15910588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 312
               

               
Conread position:
               
32-385
               

               
Cow position:
               
chr17:1783897-1783527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 109
               

               
Conread position:
               
33-358
               

               
Cow position:
               
chr17:25740660-25740990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
51, 298
               

               
Conread position:
               
33-360
               

               
Cow position:
               
chr17:4480115-4479777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
53, 272
               

               
Conread position:
               
33-364
               

               
Cow position:
               
chr17:3471125-3471476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 162
               

               
Conread position:
               
34-322
               

               
Cow position:
               
chr17:43324507-43324206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
35-301
               

               
Cow position:
               
chr17:31122886-31122608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
36-228
               

               
Cow position:
               
chr17:8832391-8832189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 62
               

               
Conread position:
               
37-237
               

               
Cow position:
               
chr17:4085419-4085628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 7
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr17:16448048-16448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
52, 70
               

               
Conread position:
               
37-330
               

               
Cow position:
               
chr17:25707659-25707974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
56, 249
               

               
Conread position:
               
37-560
               

               
Cow position:
               
chr17:18720730-18720205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 44
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr17:4752603-4752777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
38-322
               

               
Cow position:
               
chr17:10634343-10634054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 237
               

               
Conread position:
               
38-415
               

               
Cow position:
               
chr17:19891332-19891734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
39-217
               

               
Cow position:
               
chr17:24867972-24868147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
133, 83
               

               
Conread position:
               
39-542
               

               
Cow position:
               
chr17:22032967-22032459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 94
               

               
Conread position:
               
40-330
               

               
Cow position:
               
chr17:2711332-2711035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
40-355
               

               
Cow position:
               
chr17:5330290-5330619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 249
               

               
Conread position:
               
41-250
               

               
Cow position:
               
chr17:21771322-21771538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
45, 178
               

               
Conread position:
               
41-349
               

               
Cow position:
               
chr17:30059706-30060025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
45, 303
               

               
Conread position:
               
42-482
               

               
Cow position:
               
chr17:8544027-8544476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
44-167
               

               
Cow position:
               
chr17:18579938-18580064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
44-270
               

               
Cow position:
               
chr17:12054441-12054676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
44-276
               

               
Cow position:
               
chr17:25908814-25909050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
44-368
               

               
Cow position:
               
chr17:1080725-1081054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
44, 118
               

               
Conread position:
               
46-409
               

               
Cow position:
               
chr17:37163806-37163426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 233
               

               
Conread position:
               
47-226
               

               
Cow position:
               
chr17:44926825-44927004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
47-308
               

               
Cow position:
               
chr17:35244891-35244628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 77
               

               
Conread position:
               
47-360
               

               
Cow position:
               
chr17:3709589-3709914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 297
               

               
Conread position:
               
47-360
               

               
Cow position:
               
chr17:11376585-11376910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
39, 240
               

               
Conread position:
               
47-365
               

               
Cow position:
               
chr17:21620438-21620771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
47-432
               

               
Cow position:
               
chr17:13425320-13425714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
47-528
               

               
Cow position:
               
chr17:18472911-18473378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
48-348
               

               
Cow position:
               
chr17:21494492-21494180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 297
               

               
Conread position:
               
49-330
               

               
Cow position:
               
chr17:9568061-9567775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
40, 264
               

               
Conread position:
               
50-230
               

               
Cow position:
               
chr17:42559843-42560028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
50-253
               

               
Cow position:
               
chr17:22082165-22081963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr17:14243897-14244167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
50-313
               

               
Cow position:
               
chr17:7041210-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
50-412
               

               
Cow position:
               
chr17:11278295-11277921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr17:7760742-7760482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
38, 213
               

               
Conread position:
               
51-320
               

               
Cow position:
               
chr17:10790041-10790320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
38, 20
               

               
Conread position:
               
51-479
               

               
Cow position:
               
chr17:20126349-20126767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
51-530
               

               
Cow position:
               
chr17:17950971-17951450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 199
               

               
Conread position:
               
52-224
               

               
Cow position:
               
chr17:6997819-6997992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 145
               

               
Conread position:
               
54-514
               

               
Cow position:
               
chr17:8079048-8079527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
56-328
               

               
Cow position:
               
chr17:14051369-14051084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
56-337
               

               
Cow position:
               
chr17:37161148-37161432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 173
               

               
Conread position:
               
56-506
               

               
Cow position:
               
chr17:25796607-25796140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 334
               

               
Conread position:
               
57-207
               

               
Cow position:
               
chr17:5740300-5740451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
57-330
               

               
Cow position:
               
chr17:16292117-16291831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
57-445
               

               
Cow position:
               
chr17:3503312-3503721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 152
               

               
Conread position:
               
57-563
               

               
Cow position:
               
chr17:31481305-31480779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 69
               

               
Conread position:
               
58-321
               

               
Cow position:
               
chr17:42347486-42347220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
58-557
               

               
Cow position:
               
chr17:26818717-26818228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 238
               

               
Conread position:
               
59-303
               

               
Cow position:
               
chr17:24876878-24877130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
59-312
               

               
Cow position:
               
chr17:22211590-22211855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
59-328
               

               
Cow position:
               
chr17:33121827-33122107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
59-334
               

               
Cow position:
               
chr17:11296374-11296659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
60-239
               

               
Cow position:
               
chr17:9950696-9950880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
29, 73
               

               
Conread position:
               
60-299
               

               
Cow position:
               
chr17:20908662-20908414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
60-308
               

               
Cow position:
               
chr17:3511652-3511392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
60-331
               

               
Cow position:
               
chr17:4612339-4612062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
43, 224
               

               
Conread position:
               
62-538
               

               
Cow position:
               
chr17:21115206-21114730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 123
               

               
Conread position:
               
65-284
               

               
Cow position:
               
chr17:29363618-29363406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
69-210
               

               
Cow position:
               
chr17:24754683-24754536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
69-331
               

               
Cow position:
               
chr17:3042228-3042489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 136
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr17:8212833-8213085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
71-354
               

               
Cow position:
               
chr17:144425-144136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
16, 65
               

               
Conread position:
               
71-381
               

               
Cow position:
               
chr17:5380717-5381032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
55, 93
               

               
Conread position:
               
73-297
               

               
Cow position:
               
chr17:40646751-40646986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
73-331
               

               
Cow position:
               
chr17:2258029-2258299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
74-246
               

               
Cow position:
               
chr17:13124983-13124801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
75-302
               

               
Cow position:
               
chr17:25335628-25335407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
75-315
               

               
Cow position:
               
chr17:21031540-21031782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
77-428
               

               
Cow position:
               
chr17:11172861-11172492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 186
               

               
Conread position:
               
82-337
               

               
Cow position:
               
chr17:4721249-4721514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
82-487
               

               
Cow position:
               
chr17:15340967-15340570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
83-292
               

               
Cow position:
               
chr17:17267169-17266954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 167
               

               
Conread position:
               
83-330
               

               
Cow position:
               
chr17:2177760-2178020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 203
               

               
Conread position:
               
84-212
               

               
Cow position:
               
chr17:2248098-2248228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
84-212
               

               
Cow position:
               
chr17:24285896-24286026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
84-239
               

               
Cow position:
               
chr17:4836377-4836540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
84-308
               

               
Cow position:
               
chr17:37579215-37578984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
84-363
               

               
Cow position:
               
chr17:1526589-1526302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 49
               

               
Conread position:
               
84-482
               

               
Cow position:
               
chr17:18495743-18495345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
84-540
               

               
Cow position:
               
chr17:29080330-29080764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
84-540
               

               
Cow position:
               
chr17:44147208-44146746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 59
               

               
Conread position:
               
84-559
               

               
Cow position:
               
chr17:16371014-16371503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 353
               

               
Conread position:
               
84-562
               

               
Cow position:
               
chr17:11664824-11664323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
84-563
               

               
Cow position:
               
chr17:17059204-17059669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
84-563
               

               
Cow position:
               
chr17:21004067-21003583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 189
               

               
Conread position:
               
85-329
               

               
Cow position:
               
chr17:14848757-14848527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
85-385
               

               
Cow position:
               
chr17:20839793-20839488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 61
               

               
Conread position:
               
86-339
               

               
Cow position:
               
chr17:26627877-26627612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
87-240
               

               
Cow position:
               
chr17:3258265-3258417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
87-336
               

               
Cow position:
               
chr17:18814997-18815239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
87-355
               

               
Cow position:
               
chr17:33999277-33999011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 166
               

               
Conread position:
               
87-444
               

               
Cow position:
               
chr17:27142521-27142884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 215
               

               
Conread position:
               
87-563
               

               
Cow position:
               
chr17:32419352-32418867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 218
               

               
Conread position:
               
88-294
               

               
Cow position:
               
chr17:27162419-27162633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
88-348
               

               
Cow position:
               
chr17:7337262-7336994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
45, 253
               

               
Conread position:
               
88-412
               

               
Cow position:
               
chr17:38200998-38200656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
38, 280
               

               
Conread position:
               
90-308
               

               
Cow position:
               
chr17:6391754-6391971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 35
               

               
Conread position:
               
90-337
               

               
Cow position:
               
chr17:5228913-5229162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 224
               

               
Conread position:
               
90-348
               

               
Cow position:
               
chr17:20561244-20561510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 251
               

               
Conread position:
               
91-308
               

               
Cow position:
               
chr17:21425734-21425960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
92-352
               

               
Cow position:
               
chr17:25141238-25141483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
93-238
               

               
Cow position:
               
chr17:24818026-24818173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
93-272
               

               
Cow position:
               
chr17:37773759-37773579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
93-278
               

               
Cow position:
               
chr17:1359024-1358838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 56
               

               
Conread position:
               
93-281
               

               
Cow position:
               
chr17:23680757-23680946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
93-291
               

               
Cow position:
               
chr17:36817715-36817917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
93-294
               

               
Cow position:
               
chr17:38116185-38116391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 96
               

               
Conread position:
               
93-309
               

               
Cow position:
               
chr17:30999549-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
93-314
               

               
Cow position:
               
chr17:38276465-38276686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
93-320
               

               
Cow position:
               
chr17:2079534-2079766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
93-321
               

               
Cow position:
               
chr17:5745470-5745247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
39, 105
               

               
Conread position:
               
93-336
               

               
Cow position:
               
chr17:13989401-13989152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 173
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr17:33403167-33402916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
37, 239
               

               
Conread position:
               
93-363
               

               
Cow position:
               
chr17:24761450-24761172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
93-373
               

               
Cow position:
               
chr17:9778024-9778309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
93-421
               

               
Cow position:
               
chr17:20215945-20216282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 171
               

               
Conread position:
               
93-464
               

               
Cow position:
               
chr17:12220165-12219779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 320
               

               
Conread position:
               
93-476
               

               
Cow position:
               
chr17:11832363-11831944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
107, 40
               

               
Conread position:
               
93-538
               

               
Cow position:
               
chr17:24587391-24587848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 381
               

               
Conread position:
               
93-539
               

               
Cow position:
               
chr17:32554250-32553824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
93-541
               

               
Cow position:
               
chr17:24787248-24786797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 157
               

               
Conread position:
               
93-542
               

               
Cow position:
               
chr17:7810966-7810518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
93-542
               

               
Cow position:
               
chr17:36275130-36275565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
37, 96
               

               
Conread position:
               
93-556
               

               
Cow position:
               
chr17:36790921-36791367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
182, 33
               

               
Conread position:
               
93-557
               

               
Cow position:
               
chr17:34948413-34948881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
94-238
               

               
Cow position:
               
chr17:3578017-3578164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
94-238
               

               
Cow position:
               
chr17:15376097-15376244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
94-337
               

               
Cow position:
               
chr17:1020793-1020541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
36, 237
               

               
Conread position:
               
94-344
               

               
Cow position:
               
chr17:4824275-4824526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
105, 32
               

               
Conread position:
               
94-348
               

               
Cow position:
               
chr17:10798159-10797897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 247
               

               
Conread position:
               
94-444
               

               
Cow position:
               
chr17:39485581-39485901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
94-461
               

               
Cow position:
               
chr17:9746295-9746668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
94-488
               

               
Cow position:
               
chr17:35126488-35126894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 90
               

               
Conread position:
               
95-322
               

               
Cow position:
               
chr17:156502-156740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
95-344
               

               
Cow position:
               
chr17:9494576-9494318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
95-472
               

               
Cow position:
               
chr17:27047938-27048320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
95-484
               

               
Cow position:
               
chr17:23245986-23246375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 281
               

               
Conread position:
               
96-236
               

               
Cow position:
               
chr17:10769858-10770000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 36
               

               
Conread position:
               
96-240
               

               
Cow position:
               
chr17:7423665-7423517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
96-240
               

               
Cow position:
               
chr17:20337571-20337713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
96-270
               

               
Cow position:
               
chr17:36533437-36533611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr17:16307155-16307382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
96-320
               

               
Cow position:
               
chr17:27780631-27780856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 84
               

               
Conread position:
               
96-331
               

               
Cow position:
               
chr17:22781468-22781706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
104, 36
               

               
Conread position:
               
96-338
               

               
Cow position:
               
chr17:27819078-27819323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
96-343
               

               
Cow position:
               
chr17:15132942-15133177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
219, 76
               

               
Conread position:
               
96-413
               

               
Cow position:
               
chr17:21755665-21755327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 322
               

               
Conread position:
               
96-484
               

               
Cow position:
               
chr17:2662185-2662600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 357
               

               
Conread position:
               
96-546
               

               
Cow position:
               
chr17:5423295-5422845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
96-553
               

               
Cow position:
               
chr17:6423537-6423997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
96-559
               

               
Cow position:
               
chr17:17410074-17410546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
96-564
               

               
Cow position:
               
chr17:7697832-7698307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 42
               

               
Conread position:
               
97-240
               

               
Cow position:
               
chr17:20055447-20055593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
97-322
               

               
Cow position:
               
chr17:21017571-21017803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
36, 158
               

               
Conread position:
               
97-385
               

               
Cow position:
               
chr17:41290240-41289944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 78
               

               
Conread position:
               
97-451
               

               
Cow position:
               
chr17:22806757-22806397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 20
               

               
Conread position:
               
97-539
               

               
Cow position:
               
chr17:39771173-39771628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
97-569
               

               
Cow position:
               
chr17:20157394-20157863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 99
               

               
Conread position:
               
98-323
               

               
Cow position:
               
chr17:8861403-8861175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
98-542
               

               
Cow position:
               
chr17:7132677-7132195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 418
               

               
Conread position:
               
99-267
               

               
Cow position:
               
chr17:12759861-12759684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
99-308
               

               
Cow position:
               
chr17:31263523-31263305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
100-281
               

               
Cow position:
               
chr17:36533154-36533341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
100-323
               

               
Cow position:
               
chr17:8230397-8230630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 173
               

               
Conread position:
               
100-331
               

               
Cow position:
               
chr17:39012498-39012743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
100-338
               

               
Cow position:
               
chr17:18884567-18884313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
100-338
               

               
Cow position:
               
chr17:33386211-33386438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
100-392
               

               
Cow position:
               
chr17:15333930-15333625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
101-230
               

               
Cow position:
               
chr17:32977193-32977060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
101-309
               

               
Cow position:
               
chr17:10220262-10220469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
101-473
               

               
Cow position:
               
chr17:33792963-33793329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
32, 97
               

               
Conread position:
               
101-562
               

               
Cow position:
               
chr17:25128568-25128105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
101-563
               

               
Cow position:
               
chr17:12325965-12325522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 89
               

               
Conread position:
               
102-273
               

               
Cow position:
               
chr17:21323082-21323250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
103, 24
               

               
Conread position:
               
102-309
               

               
Cow position:
               
chr17:29040684-29040472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 155
               

               
Conread position:
               
102-321
               

               
Cow position:
               
chr17:38994167-38994396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
102-348
               

               
Cow position:
               
chr17:12956382-12956128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
31, 239
               

               
Conread position:
               
102-380
               

               
Cow position:
               
chr17:20835375-20835654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 216
               

               
Conread position:
               
102-399
               

               
Cow position:
               
chr17:20870311-20870006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
91, 30
               

               
Conread position:
               
102-541
               

               
Cow position:
               
chr17:24004177-24004601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
102-550
               

               
Cow position:
               
chr17:11281325-11280852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 58
               

               
Conread position:
               
102-558
               

               
Cow position:
               
chr17:21739102-21738618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 389
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr17:30713135-30713600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 59
               

               
Conread position:
               
103-245
               

               
Cow position:
               
chr17:4685349-4685499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
103-245
               

               
Cow position:
               
chr17:18174021-18173876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
103-299
               

               
Cow position:
               
chr17:3182801-3182601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
103-319
               

               
Cow position:
               
chr17:8837158-8836946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
103-321
               

               
Cow position:
               
chr17:4473020-4472811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
103-431
               

               
Cow position:
               
chr17:11156710-11156368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 197
               

               
Conread position:
               
103-542
               

               
Cow position:
               
chr17:33052646-33053083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 95
               

               
Conread position:
               
104-245
               

               
Cow position:
               
chr17:11655210-11655354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
104-254
               

               
Cow position:
               
chr17:15354770-15354921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
104-322
               

               
Cow position:
               
chr17:8279923-8279702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
104-331
               

               
Cow position:
               
chr17:18245859-18246094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
104-344
               

               
Cow position:
               
chr17:15155404-15155152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 224
               

               
Conread position:
               
104-431
               

               
Cow position:
               
chr17:25097247-25097581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
26, 220
               

               
Conread position:
               
104-539
               

               
Cow position:
               
chr17:7436950-7437397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 64
               

               
Conread position:
               
104-559
               

               
Cow position:
               
chr17:15684289-15684749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 372
               

               
Conread position:
               
105-290
               

               
Cow position:
               
chr17:25078208-25078027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
105-330
               

               
Cow position:
               
chr17:44821972-44821738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
106-299
               

               
Cow position:
               
chr17:1328184-1327987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 159
               

               
Conread position:
               
106-322
               

               
Cow position:
               
chr17:19756114-19755892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
36, 200
               

               
Conread position:
               
106-330
               

               
Cow position:
               
chr17:37415114-37414879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 75
               

               
Conread position:
               
106-360
               

               
Cow position:
               
chr17:11837208-11837462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
106-554
               

               
Cow position:
               
chr17:32472005-32471546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 27
               

               
Conread position:
               
107-305
               

               
Cow position:
               
chr17:35372029-35371835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 99
               

               
Conread position:
               
107-536
               

               
Cow position:
               
chr17:4225704-4225263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
108-284
               

               
Cow position:
               
chr17:21710293-21710474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
20, 131
               

               
Conread position:
               
108-420
               

               
Cow position:
               
chr17:1275307-1275638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
25, 266
               

               
Conread position:
               
108-565
               

               
Cow position:
               
chr17:40741435-40741906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 347
               

               
Conread position:
               
109-238
               

               
Cow position:
               
chr17:44108704-44108572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
109-426
               

               
Cow position:
               
chr17:31231325-31231002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
110-304
               

               
Cow position:
               
chr17:966949-966750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
110-317
               

               
Cow position:
               
chr17:27765071-27765271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 85
               

               
Conread position:
               
110-540
               

               
Cow position:
               
chr17:20932126-20932556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
110-541
               

               
Cow position:
               
chr17:11361973-11362404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
111-415
               

               
Cow position:
               
chr17:38646859-38647171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 19
               

               
Conread position:
               
111-466
               

               
Cow position:
               
chr17:25032681-25032320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
16, 102
               

               
Conread position:
               
111-542
               

               
Cow position:
               
chr17:10446707-10447142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
17, 139
               

               
Conread position:
               
111-582
               

               
Cow position:
               
chr17:32279116-32278634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
19, 212
               

               
Conread position:
               
112-273
               

               
Cow position:
               
chr17:20912690-20912850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 88
               

               
Conread position:
               
112-430
               

               
Cow position:
               
chr17:21243994-21243665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 153
               

               
Conread position:
               
113-473
               

               
Cow position:
               
chr17:27429371-27429731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
20, 150
               

               
Conread position:
               
114-238
               

               
Cow position:
               
chr17:10432401-10432277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr17:6624052-6624276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
19, 183
               

               
Conread position:
               
115-344
               

               
Cow position:
               
chr17:21628277-21628508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
18, 96
               

               
Conread position:
               
116-337
               

               
Cow position:
               
chr17:44232924-44232692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
119-261
               

               
Cow position:
               
chr17:26224317-26224467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
122-322
               

               
Cow position:
               
chr17:24490323-24490534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
123-558
               

               
Cow position:
               
chr17:908551-908985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
126-296
               

               
Cow position:
               
chr17:21412439-21412265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
126-322
               

               
Cow position:
               
chr17:32950080-32950280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
126-326
               

               
Cow position:
               
chr17:37480185-37479982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 174
               

               
Conread position:
               
126-330
               

               
Cow position:
               
chr17:35311229-35311440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 205
               

               
Conread position:
               
126-350
               

               
Cow position:
               
chr17:4436423-4436195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
73, 104
               

               
Conread position:
               
126-362
               

               
Cow position:
               
chr17:21207327-21207086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 131
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr17:21697540-21697790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
86, 240
               

               
Conread position:
               
126-421
               

               
Cow position:
               
chr17:35990904-35991197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 119
               

               
Conread position:
               
126-475
               

               
Cow position:
               
chr17:37482271-37481902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 314
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr17:20072267-20071874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 63
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr17:21434921-21434499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
126-543
               

               
Cow position:
               
chr17:5514567-5514987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
126-559
               

               
Cow position:
               
chr17:12447590-12447153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 22
               

               
Conread position:
               
126-563
               

               
Cow position:
               
chr17:1256696-1256245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
127-301
               

               
Cow position:
               
chr17:24773492-24773665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 122
               

               
Conread position:
               
127-322
               

               
Cow position:
               
chr17:5006682-5006482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
127-561
               

               
Cow position:
               
chr17:25999925-26000369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 266
               

               
Conread position:
               
128-464
               

               
Cow position:
               
chr17:9911573-9911917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
128-546
               

               
Cow position:
               
chr17:12536658-12536241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 321
               

               
Conread position:
               
129-368
               

               
Cow position:
               
chr17:34208009-34207754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
130-541
               

               
Cow position:
               
chr17:1063001-1063396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
68, 96
               

               
Conread position:
               
133-567
               

               
Cow position:
               
chr17:25611908-25612345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 70
               

               
Conread position:
               
134-542
               

               
Cow position:
               
chr17:10459119-10458705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
134-542
               

               
Cow position:
               
chr17:21599866-21599451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
135-559
               

               
Cow position:
               
chr17:1035784-1035346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 341
               

               
Conread position:
               
136-321
               

               
Cow position:
               
chr17:36203672-36203482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 83
               

               
Conread position:
               
136-579
               

               
Cow position:
               
chr17:3577356-3577814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 155
               

               
Conread position:
               
137-541
               

               
Cow position:
               
chr17:21415019-21414602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
137-541
               

               
Cow position:
               
chr17:21437502-21437085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 12
               

               
Conread position:
               
138-362
               

               
Cow position:
               
chr17:9697881-9697653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 18
               

               
Conread position:
               
139-290
               

               
Cow position:
               
chr17:3442847-3442694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
61, 130
               

               
Conread position:
               
142-412
               

               
Cow position:
               
chr17:24149001-24149291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
142-527
               

               
Cow position:
               
chr17:32273860-32273467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
66, 46
               

               
Conread position:
               
143-330
               

               
Cow position:
               
chr17:12278315-12278510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
143-444
               

               
Cow position:
               
chr17:12590988-12591313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
144-354
               

               
Cow position:
               
chr17:18824616-18824830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 193
               

               
Conread position:
               
145-461
               

               
Cow position:
               
chr17:20990367-20990033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
146-571
               

               
Cow position:
               
chr17:1634654-1634233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 18
               

               
Conread position:
               
147-479
               

               
Cow position:
               
chr17:24821695-24822035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 134
               

               
Conread position:
               
150-412
               

               
Cow position:
               
chr17:21918042-21917766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
151-489
               

               
Cow position:
               
chr17:38363141-38362811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
151-548
               

               
Cow position:
               
chr17:12306563-12306165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 140
               

               
Conread position:
               
152-376
               

               
Cow position:
               
chr17:10510828-10510588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr17:4106150-4105746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
154-559
               

               
Cow position:
               
chr17:4121886-4121481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
156-542
               

               
Cow position:
               
chr17:7142702-7143086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 141
               

               
Conread position:
               
156-542
               

               
Cow position:
               
chr17:27058715-27058320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
156-550
               

               
Cow position:
               
chr17:1562936-1562554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
157-539
               

               
Cow position:
               
chr17:18419511-18419911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 299
               

               
Conread position:
               
159-345
               

               
Cow position:
               
chr17:38613087-38613274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
159-563
               

               
Cow position:
               
chr17:28467977-28468373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
48, 112
               

               
Conread position:
               
160-421
               

               
Cow position:
               
chr17:14762277-14762006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 86
               

               
Conread position:
               
161-551
               

               
Cow position:
               
chr17:18146025-18146428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 260
               

               
Conread position:
               
163-540
               

               
Cow position:
               
chr17:9966188-9965795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 289
               

               
Conread position:
               
164-431
               

               
Cow position:
               
chr17:4967956-4968238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
164-559
               

               
Cow position:
               
chr17:31037534-31037132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 305
               

               
Conread position:
               
166-541
               

               
Cow position:
               
chr17:31701285-31701663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
34, 157
               

               
Conread position:
               
167-563
               

               
Cow position:
               
chr17:3467618-3468004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
166, 99
               

               
Conread position:
               
168-554
               

               
Cow position:
               
chr17:24559149-24559535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
170-559
               

               
Cow position:
               
chr17:25117742-25118136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
171-415
               

               
Cow position:
               
chr17:6328961-6329225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
183-648
               

               
Cow position:
               
chr17:40673252-40673707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 5
               

               
Conread position:
               
184-582
               

               
Cow position:
               
chr17:32280531-32280938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
30, 137
               

               
Conread position:
               
185-412
               

               
Cow position:
               
chr17:14060909-14060667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-555
               

               
Cow position:
               
chr17:30728402-30728749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
197-584
               

               
Cow position:
               
chr17:6318976-6318595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
201-441
               

               
Cow position:
               
chr17:23563904-23563659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
202-484
               

               
Cow position:
               
chr17:35339029-35338740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
129, 256
               

               
Conread position:
               
203-568
               

               
Cow position:
               
chr17:25616146-25616500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
105, 76
               

               
Conread position:
               
209-534
               

               
Cow position:
               
chr17:40851876-40852189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 81
               

               
Conread position:
               
210-542
               

               
Cow position:
               
chr17:21758252-21757890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 345
               

               
Conread position:
               
214-567
               

               
Cow position:
               
chr17:21325231-21325601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 91
               

               
Conread position:
               
215-513
               

               
Cow position:
               
chr17:14652881-14652576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
106, 213
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:35573663-35573912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
102, 64
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr17:23517040-23516783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
219-541
               

               
Cow position:
               
chr17:11912594-11912277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
219-542
               

               
Cow position:
               
chr17:25514220-25513889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
221-485
               

               
Cow position:
               
chr17:27203139-27202866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
228-542
               

               
Cow position:
               
chr17:25342828-25342511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
14, 134
               

               
Conread position:
               
237-563
               

               
Cow position:
               
chr17:9824590-9824916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 227
               

               
Conread position:
               
248-560
               

               
Cow position:
               
chr17:40638882-40639194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 183
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr17:24750852-24751141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 123
               

               
Conread position:
               
251-562
               

               
Cow position:
               
chr17:3153636-3153319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
251-563
               

               
Cow position:
               
chr17:34791131-34790815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
251-568
               

               
Cow position:
               
chr17:29026003-29026328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 181
               

               
Conread position:
               
275-557
               

               
Cow position:
               
chr17:21039523-21039800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
275-569
               

               
Cow position:
               
chr17:25800923-25800628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
43, 160
               

               
Conread position:
               
281-483
               

               
Cow position:
               
chr17:11306185-11306386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 47
               

               
Conread position:
               
286-564
               

               
Cow position:
               
chr17:17044363-17044083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 166
               

               
Conread position:
               
316-559
               

               
Cow position:
               
chr17:21466256-21466010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
10, 141
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr17:42150410-42150617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
326-556
               

               
Cow position:
               
chr17:26575210-26574978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 147
               

               
Conread position:
               
326-559
               

               
Cow position:
               
chr17:17034968-17035192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 129
               

               
Conread position:
               
326-561
               

               
Cow position:
               
chr17:25473261-25473033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
326-571
               

               
Cow position:
               
chr17:7959199-7959435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
53, 95
               

               
Conread position:
               
328-557
               

               
Cow position:
               
chr17:32333070-32332848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr17:29995414-29995187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
73, 138
               

               
Conread position:
               
330-559
               

               
Cow position:
               
chr17:18934283-18934502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 57
               

               
Conread position:
               
330-566
               

               
Cow position:
               
chr17:37341014-37340778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 131
               

               
Conread position:
               
334-573
               

               
Cow position:
               
chr17:40276767-40276997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
50, 86
               

               
Conread position:
               
335-542
               

               
Cow position:
               
chr17:946385-946585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 120
               

               
Conread position:
               
336-542
               

               
Cow position:
               
chr17:25511274-25511471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
336-568
               

               
Cow position:
               
chr17:9713313-9713066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
348-557
               

               
Cow position:
               
chr17:21718956-21718753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 114
               

               
Conread position:
               
348-563
               

               
Cow position:
               
chr17:24895114-24895327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
55, 107
               

               
Conread position:
               
351-588
               

               
Cow position:
               
chr17:21676934-21677163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 118
               

               
Conread position:
               
378-551
               

               
Cow position:
               
chr17:30737514-30737689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
378-563
               

               
Cow position:
               
chr17:8663575-8663757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
24, 47
               
Show alignments to all cow chromosomes.