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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8003H20.3
        

               
Conread position:
               
1-93
               

               
Cow position:
               
chr18:36232926-36232834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
93
               

               
Alignm identity:
               
79
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-112
               

               
Cow position:
               
chr18:268444-268333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-128
               

               
Cow position:
               
chr18:19761111-19761241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-132
               

               
Cow position:
               
chr18:291104-290970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr18:24267237-24267073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-167
               

               
Cow position:
               
chr18:13877124-13876953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr18:29484738-29484570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
1-171
               

               
Cow position:
               
chr18:49227300-49227472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr18:2864601-2864427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
1-174
               

               
Cow position:
               
chr18:4950157-4950333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr18:48451283-48451457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 132
               

               
Conread position:
               
1-180
               

               
Cow position:
               
chr18:4628314-4628130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr18:11311541-11311360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
90, 175
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr18:12585535-12585347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr18:23658954-23658758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr18:46321664-46321463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 136
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr18:18820054-18819852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
132, 96
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr18:4254321-4254114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 127
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr18:7969820-7970032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 83
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr18:54656894-54657106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:14121687-14121896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 128
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:16050481-16050272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 6
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:20226541-20226325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
87, 199
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:30216171-30216380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
83, 126
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr18:51191147-51190936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr18:21751908-21752125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr18:4725876-4725661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 213
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr18:21106547-21106331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
127, 89
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr18:24491467-24491242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
140, 87
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr18:51679268-51679038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
90, 217
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr18:55699563-55699334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr18:4556781-4556550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 210
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr18:10897265-10897497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
201, 120
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr18:26001757-26001519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr18:52993873-52994116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr18:13212859-13213095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:17341899-17342148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 58
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:32908508-32908746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:36224386-36224623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr18:36346461-36346209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr18:50927340-50927588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
63, 174
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:4535379-4535127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:29013404-29013143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
1-253
               

               
Cow position:
               
chr18:7076373-7076633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr18:11262568-11262822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
132, 69
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:8967609-8967867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 73
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr18:22569422-22569163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr18:1023395-1023653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
127, 212
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr18:35535680-35535407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 194
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr18:34621759-34621473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 139
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr18:35752045-35751776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr18:81368-81646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:21682363-21682079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:33506999-33506708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 79
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr18:52632813-52632505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
89, 271
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr18:7946980-7947298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr18:19123782-19124090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
54, 272
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr18:6829459-6829181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 129
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr18:6046882-6046564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 181
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:4624824-4624510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 191
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:22874477-22874795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 155
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr18:50224631-50224315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr18:32860254-32860566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr18:43463814-43463483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 197
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:6290390-6290712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 8
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:47314693-47314363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
88, 251
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:38089976-38089640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 263
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:4707681-4707353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 6
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr18:35636742-35636419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:4315904-4316243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 194
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr18:25626629-25626954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
103, 281
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr18:19159358-19159032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr18:2270898-2270563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 248
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr18:36097822-36098145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 90
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:28794460-28794126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr18:51691863-51691523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 280
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr18:1859618-1859273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:21195734-21195400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 263
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr18:36445035-36445385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 64
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:601565-601233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 134
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:3166870-3166549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 6
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:55768574-55768221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 337
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr18:19362673-19362332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
205, 78
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr18:26937332-26937692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
87, 189
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr18:54166492-54166140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
129, 11
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr18:44235803-44236179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 129
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr18:33606236-33606614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 11
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr18:19977373-19977001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 248
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr18:22092394-22092779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr18:16418088-16417689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 244
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr18:6103497-6103079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
123, 43
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:55552570-55552998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr18:4926679-4927102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
83, 162
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr18:7322340-7322759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
87, 78
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr18:51500472-51500039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
96, 66
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr18:14815730-14815310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 207
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr18:30248523-30248099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 231
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chr18:45961654-45961231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 155
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:13172920-13172490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 307
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:17324317-17324743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:20174525-20174087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 207
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr18:30794060-30794468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 82
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chr18:5486856-5487286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 263
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr18:51443823-51443390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 370
               

               
Conread position:
               
1-438
               

               
Cow position:
               
chr18:13508121-13507681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 124
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr18:23766815-23766347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr18:55589869-55589430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
1-442
               

               
Cow position:
               
chr18:47511599-47512069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 316
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr18:50637855-50637409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 293
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr18:29357032-29356559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr18:38686707-38687145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:19850140-19849687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 127
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chr18:47183680-47183220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 329
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr18:29796828-29796349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
1-458
               

               
Cow position:
               
chr18:50082628-50082178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
1-460
               

               
Cow position:
               
chr18:11376976-11377444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chr18:55787536-55788005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 17
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:4540267-4539797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 144
               

               
Conread position:
               
1-464
               

               
Cow position:
               
chr18:20641875-20641410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 73
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr18:28658303-28657815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 77
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr18:7649597-7650084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 188
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr18:11322194-11322706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 255
               

               
Conread position:
               
1-489
               

               
Cow position:
               
chr18:19645783-19646283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 160
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:9007753-9008239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 161
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr18:49655321-49655805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 202
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:4796574-4797093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 174
               

               
Conread position:
               
1-539
               

               
Cow position:
               
chr18:3416778-3417318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 241
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:22121275-22120732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 106
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:37002240-37002790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:3193338-3193864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
321, 93
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:9029231-9029768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:16044544-16043995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:19193740-19193217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 106
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:37023951-37023382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr18:40758817-40759376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 240
               

               
Conread position:
               
1-545
               

               
Cow position:
               
chr18:21251594-21252146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 218
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr18:7950718-7951289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
90, 252
               

               
Conread position:
               
1-556
               

               
Cow position:
               
chr18:39002190-39001645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 173
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr18:9066322-9066870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 179
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr18:20125911-20126462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 448
               

               
Conread position:
               
1-557
               

               
Cow position:
               
chr18:31082734-31082173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:7964836-7965404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 296
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:11779271-11779827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:12118240-12117681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 261
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:20864591-20865161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr18:33502767-33502216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
1-560
               

               
Cow position:
               
chr18:12270097-12270685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 317
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr18:30360515-30359969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 189
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr18:36458539-36459126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 214
               

               
Conread position:
               
1-561
               

               
Cow position:
               
chr18:43950444-43951004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr18:3180025-3180585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 336
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr18:5190074-5189515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 166
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr18:7486857-7487413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 296
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr18:52457442-52456885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
126, 29
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr18:55119479-55120042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 271
               

               
Conread position:
               
1-567
               

               
Cow position:
               
chr18:9089311-9089889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr18:9010337-9010894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
1-572
               

               
Cow position:
               
chr18:23630970-23630430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 172
               

               
Conread position:
               
1-573
               

               
Cow position:
               
chr18:31672896-31672328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chr18:28767972-28768583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 166
               

               
Conread position:
               
1-612
               

               
Cow position:
               
chr18:51756705-51757319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
630
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr18:26938592-26939237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr18:52899673-52899885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr18:37492976-37493220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 109
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr18:24293466-24293699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
89, 55
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr18:52596002-52596239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
123, 92
               

               
Conread position:
               
2-239
               

               
Cow position:
               
chr18:19640405-19640652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr18:32280904-32281146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr18:33272552-33272793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr18:10082486-10082727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
167, 90
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr18:54031316-54031565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr18:27078454-27078711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 176
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr18:21721674-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr18:21938961-21939269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 179
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr18:49161850-49161533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr18:29768520-29768836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-322
               

               
Cow position:
               
chr18:11309018-11309354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
2-324
               

               
Cow position:
               
chr18:24021997-24022312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
238, 78
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr18:18340347-18340020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
2-337
               

               
Cow position:
               
chr18:51713103-51712754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 337
               

               
Conread position:
               
2-339
               

               
Cow position:
               
chr18:16045393-16045050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 5
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr18:46108773-46108405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 183
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr18:3098707-3098336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 119
               

               
Conread position:
               
2-432
               

               
Cow position:
               
chr18:17004860-17005313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr18:42747193-42747752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 177
               

               
Conread position:
               
2-542
               

               
Cow position:
               
chr18:14586870-14586324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 141
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr18:28101232-28101805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 385
               

               
Conread position:
               
2-559
               

               
Cow position:
               
chr18:22790463-22789913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
2-563
               

               
Cow position:
               
chr18:55505010-55505581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
3-130
               

               
Cow position:
               
chr18:51749318-51749192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr18:5185437-5185306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr18:10292682-10292813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr18:26568534-26568665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-135
               

               
Cow position:
               
chr18:28820229-28820097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 63
               

               
Conread position:
               
3-165
               

               
Cow position:
               
chr18:32123425-32123258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-169
               

               
Cow position:
               
chr18:18990841-18990670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr18:28925505-28925321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr18:21738332-21738522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr18:42629318-42629513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr18:10084132-10084334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
126, 194
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr18:15678947-15679150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 91
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr18:16378578-16378787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr18:27798198-27797989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr18:16082440-16082653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 62
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr18:30406413-30406217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 127
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr18:34814396-34814610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr18:43393427-43393641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr18:16782051-16781833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
3-215
               

               
Cow position:
               
chr18:45901999-45901781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
81, 158
               

               
Conread position:
               
3-232
               

               
Cow position:
               
chr18:52243550-52243784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr18:45478540-45478774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr18:26844039-26843801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
82, 191
               

               
Conread position:
               
3-238
               

               
Cow position:
               
chr18:50993666-50993417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr18:30607939-30608173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 107
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr18:55697408-55697163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
84, 119
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr18:19115849-19115599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 171
               

               
Conread position:
               
3-247
               

               
Cow position:
               
chr18:28086769-28087025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr18:18445014-18444752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
3-261
               

               
Cow position:
               
chr18:5786645-5786911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 164
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr18:36777260-36777516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr18:10574660-10574940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr18:36524594-36524319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:27995633-27995942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:32019912-32019603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr18:55547469-55547159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-302
               

               
Cow position:
               
chr18:28539780-28539474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 199
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:4323158-4323470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:27102929-27103239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
78, 95
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr18:52629304-52628991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:10040347-10040034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:15911403-15911086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:17349609-17349925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:19761828-19762148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:23466406-23466721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 291
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:29072370-29072687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:37733645-37733962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:41238479-41238792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr18:45981447-45981749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 133
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr18:16857739-16858060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr18:27388161-27388476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 85
               

               
Conread position:
               
3-319
               

               
Cow position:
               
chr18:13977281-13977602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
86, 107
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr18:42966445-42966797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr18:52635474-52635146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 146
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:8624377-8624045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:18091814-18091482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:22181499-22181169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:22591518-22591186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:24547915-24547580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:42608722-42608390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:43075869-43076201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:51346242-51346574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr18:51458891-51458560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr18:36336117-36335790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
81, 198
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:11251428-11251089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:18215068-18214730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 265
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:19320585-19320924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:19531310-19531649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:23660917-23661256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:27529971-27530313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 185
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:29079691-29080031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:31309729-31310068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 280
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:34051010-34050670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:34056390-34056053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
81, 295
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:36632303-36631965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 151
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:40196065-40196404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:45979311-45979641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:53829552-53829215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 111
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr18:55417936-55418273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 323
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr18:21204996-21205306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
309, 81
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr18:42425526-42425867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr18:13270856-13271201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-336
               

               
Cow position:
               
chr18:18639983-18640325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr18:4432680-4433023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr18:2609126-2608770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 279
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr18:32755164-32755517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr18:43539071-43539423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 348
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr18:55022210-55021858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr18:55436180-55435828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr18:55555204-55555553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:1611369-1611725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:8316040-8316396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:24036897-24036541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
81, 284
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:24590738-24591090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 337
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:24599935-24599580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 333
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:26485349-26485705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:26883676-26884031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
81, 165
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:30677268-30677624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:31139703-31140059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:31201983-31202339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:33616468-33616112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:33907604-33907248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:37314772-37314416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:42421798-42421442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:45646497-45646144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
86, 300
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:46581573-46581216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:51579831-51579475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr18:51601713-51601357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr18:16842459-16842097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr18:13498002-13497632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 99
               

               
Conread position:
               
3-353
               

               
Cow position:
               
chr18:22396473-22396111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 280
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr18:26535893-26535542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
3-357
               

               
Cow position:
               
chr18:22391098-22390734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 267
               

               
Conread position:
               
3-358
               

               
Cow position:
               
chr18:27554947-27554585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr18:17002268-17002639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 278
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:215428-215060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 315
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:602512-602145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
83, 322
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:3190698-3191066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
81, 333
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:5186533-5186165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:11271051-11270681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 342
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:19356477-19356845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
81, 161
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:25005974-25005607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
81, 105
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:32436514-32436144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 342
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:42223941-42224320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 154
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:43226342-43225974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 340
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:50114334-50113962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 338
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:52575057-52575426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:54071877-54071508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr18:56017500-56017137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
3-364
               

               
Cow position:
               
chr18:39709497-39709868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 279
               

               
Conread position:
               
3-373
               

               
Cow position:
               
chr18:35364163-35363780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
3-400
               

               
Cow position:
               
chr18:34755317-34754914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
86, 308
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr18:16172664-16172237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 319
               

               
Conread position:
               
3-483
               

               
Cow position:
               
chr18:7359349-7359852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
3-548
               

               
Cow position:
               
chr18:23052957-23053515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 113
               

               
Conread position:
               
3-559
               

               
Cow position:
               
chr18:20329201-20328623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr18:1494902-1495486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 294
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr18:11866963-11867514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
3-563
               

               
Cow position:
               
chr18:33299512-33300090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
3-564
               

               
Cow position:
               
chr18:6881722-6881183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
4-131
               

               
Cow position:
               
chr18:19531068-19531198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr18:21609205-21608993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr18:15859213-15859426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
90, 53
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr18:29387839-29388152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
4-331
               

               
Cow position:
               
chr18:33756501-33756818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
224, 53
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr18:35057957-35058284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 39
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr18:35075995-35076336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 186
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr18:11618090-11618522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 130
               

               
Conread position:
               
4-447
               

               
Cow position:
               
chr18:55462101-55461641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 202
               

               
Conread position:
               
4-540
               

               
Cow position:
               
chr18:55702037-55701508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
4-542
               

               
Cow position:
               
chr18:10656055-10656609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 74
               

               
Conread position:
               
4-542
               

               
Cow position:
               
chr18:12241884-12242432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 20
               

               
Conread position:
               
5-131
               

               
Cow position:
               
chr18:51691201-51691072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
5-196
               

               
Cow position:
               
chr18:23617043-23616846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
83, 139
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr18:5451318-5451071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 80
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr18:25924332-25924646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 265
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr18:27429055-27429369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
84, 26
               

               
Conread position:
               
5-318
               

               
Cow position:
               
chr18:56361992-56361674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
5-322
               

               
Cow position:
               
chr18:13293118-13293444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
5-539
               

               
Cow position:
               
chr18:29648398-29648932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 128
               

               
Conread position:
               
5-558
               

               
Cow position:
               
chr18:15172653-15173176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
6-284
               

               
Cow position:
               
chr18:52463651-52463377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 74
               

               
Conread position:
               
7-153
               

               
Cow position:
               
chr18:9557417-9557271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 97
               

               
Conread position:
               
7-210
               

               
Cow position:
               
chr18:24712058-24711852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 116
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr18:17938327-17938534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
7-321
               

               
Cow position:
               
chr18:56151043-56150717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
7-413
               

               
Cow position:
               
chr18:3027754-3027326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 151
               

               
Conread position:
               
7-504
               

               
Cow position:
               
chr18:38606847-38607343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
7-569
               

               
Cow position:
               
chr18:7951819-7952392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 78
               

               
Conread position:
               
7-576
               

               
Cow position:
               
chr18:4152896-4152364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr18:15324159-15323923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
78, 177
               

               
Conread position:
               
8-310
               

               
Cow position:
               
chr18:7930528-7930219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
8-403
               

               
Cow position:
               
chr18:14048324-14048731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 172
               

               
Conread position:
               
8-542
               

               
Cow position:
               
chr18:45904279-45903741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
9-164
               

               
Cow position:
               
chr18:54274875-54275036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr18:950160-950362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr18:1664089-1664292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr18:20979898-20979693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 174
               

               
Conread position:
               
9-212
               

               
Cow position:
               
chr18:35337327-35337535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr18:6795341-6795135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 107
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr18:42851582-42851376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 71
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr18:30420849-30420626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr18:38670492-38670263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr18:20195890-20195652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr18:31997104-31997327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
9-254
               

               
Cow position:
               
chr18:4776083-4775842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
78, 32
               

               
Conread position:
               
9-262
               

               
Cow position:
               
chr18:41853307-41853045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
9-271
               

               
Cow position:
               
chr18:39279392-39279111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr18:17944475-17944752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
80, 225
               

               
Conread position:
               
9-297
               

               
Cow position:
               
chr18:23447465-23447173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 65
               

               
Conread position:
               
9-297
               

               
Cow position:
               
chr18:49665544-49665249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 101
               

               
Conread position:
               
9-299
               

               
Cow position:
               
chr18:32244409-32244110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
75, 192
               

               
Conread position:
               
9-302
               

               
Cow position:
               
chr18:1584592-1584314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr18:27194456-27194753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr18:27540382-27540689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 168
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr18:26573024-26572714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr18:37021539-37021854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr18:56431216-56430917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
46, 160
               

               
Conread position:
               
9-310
               

               
Cow position:
               
chr18:5570773-5571079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
9-316
               

               
Cow position:
               
chr18:1663118-1662792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
9-319
               

               
Cow position:
               
chr18:22275429-22275105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
80, 231
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr18:43473537-43473862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
77, 177
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr18:54574699-54574390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
9-323
               

               
Cow position:
               
chr18:43563841-43564164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 104
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr18:6665743-6665415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr18:20999001-20998679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr18:27169022-27169351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 178
               

               
Conread position:
               
9-331
               

               
Cow position:
               
chr18:35289007-35289333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 178
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr18:51666164-51666495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
9-338
               

               
Cow position:
               
chr18:45168446-45168785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
86, 335
               

               
Conread position:
               
9-344
               

               
Cow position:
               
chr18:33793317-33793659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 196
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr18:40059636-40059986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 335
               

               
Conread position:
               
9-353
               

               
Cow position:
               
chr18:49543102-49543437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr18:22237342-22236980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr18:25958053-25958415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
75, 316
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr18:40253041-40252678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 317
               

               
Conread position:
               
9-369
               

               
Cow position:
               
chr18:50851714-50851354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
76, 144
               

               
Conread position:
               
9-389
               

               
Cow position:
               
chr18:37334725-37335105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
9-411
               

               
Cow position:
               
chr18:25003264-25002856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 228
               

               
Conread position:
               
9-421
               

               
Cow position:
               
chr18:4182574-4182145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
9-430
               

               
Cow position:
               
chr18:38075543-38075098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
9-451
               

               
Cow position:
               
chr18:45570637-45571084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 205
               

               
Conread position:
               
9-461
               

               
Cow position:
               
chr18:35012692-35012236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
9-561
               

               
Cow position:
               
chr18:39662390-39662955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 176
               

               
Conread position:
               
9-563
               

               
Cow position:
               
chr18:32285006-32285569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
9-563
               

               
Cow position:
               
chr18:32301151-32301714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
9-564
               

               
Cow position:
               
chr18:9974711-9974154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
10-112
               

               
Cow position:
               
chr18:6733012-6732907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-124
               

               
Cow position:
               
chr18:27833465-27833348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-197
               

               
Cow position:
               
chr18:16094837-16095028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr18:39469789-39469587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
10-208
               

               
Cow position:
               
chr18:38157591-38157387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr18:6322353-6322558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr18:37153473-37153278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
118, 82
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr18:45886626-45886434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
10-210
               

               
Cow position:
               
chr18:34052365-34052170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr18:7050565-7050788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
10-238
               

               
Cow position:
               
chr18:34615866-34615636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 65
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr18:6878015-6877769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr18:16134693-16134456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
79, 47
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr18:37690983-37690760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
190, 70
               

               
Conread position:
               
10-243
               

               
Cow position:
               
chr18:90076-90302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
10-245
               

               
Cow position:
               
chr18:54065119-54064875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr18:23700255-23700004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-256
               

               
Cow position:
               
chr18:33852469-33852723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr18:26822557-26822826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
79, 195
               

               
Conread position:
               
10-270
               

               
Cow position:
               
chr18:35295176-35295447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 31
               

               
Conread position:
               
10-282
               

               
Cow position:
               
chr18:51179130-51178851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
79, 15
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr18:41837155-41836852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 258
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr18:43430959-43431265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr18:54033656-54033961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:23802972-23803282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 261
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:35637774-35638078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
79, 253
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:36512589-36512900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:37509901-37510213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-322
               

               
Cow position:
               
chr18:56168302-56167986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
10-328
               

               
Cow position:
               
chr18:30386043-30385713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-329
               

               
Cow position:
               
chr18:5457641-5457327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 86
               

               
Conread position:
               
10-344
               

               
Cow position:
               
chr18:32218640-32218297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
76, 50
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr18:54365575-54365226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 334
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr18:26286527-26286884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 237
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr18:28968328-28967963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr18:27990718-27991130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
120, 364
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr18:29862648-29862230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr18:51485549-51485971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
10-431
               

               
Cow position:
               
chr18:55015012-55015420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 138
               

               
Conread position:
               
10-471
               

               
Cow position:
               
chr18:34527493-34527002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 58
               

               
Conread position:
               
10-561
               

               
Cow position:
               
chr18:43284137-43283582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
10-563
               

               
Cow position:
               
chr18:7965885-7966423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
11-167
               

               
Cow position:
               
chr18:4496565-4496408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
118, 36
               

               
Conread position:
               
11-199
               

               
Cow position:
               
chr18:12679605-12679798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
11-207
               

               
Cow position:
               
chr18:25355477-25355678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
11-208
               

               
Cow position:
               
chr18:21213474-21213675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr18:26242483-26242277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
11-270
               

               
Cow position:
               
chr18:8988964-8989225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
115, 244
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr18:22065746-22065418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 96
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr18:23765387-23765029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 20
               

               
Conread position:
               
11-412
               

               
Cow position:
               
chr18:23949795-23949379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
78, 267
               

               
Conread position:
               
11-472
               

               
Cow position:
               
chr18:55782811-55782337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 328
               

               
Conread position:
               
12-225
               

               
Cow position:
               
chr18:52656808-52657027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
12-229
               

               
Cow position:
               
chr18:1508514-1508734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
12-288
               

               
Cow position:
               
chr18:30186293-30186010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 161
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr18:26306232-26306539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
12-310
               

               
Cow position:
               
chr18:5646858-5647169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
45, 132
               

               
Conread position:
               
12-319
               

               
Cow position:
               
chr18:21810665-21810346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
12-542
               

               
Cow position:
               
chr18:29371483-29372025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 141
               

               
Conread position:
               
12-563
               

               
Cow position:
               
chr18:55692438-55692997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 148
               

               
Conread position:
               
12-574
               

               
Cow position:
               
chr18:44262234-44262815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 228
               

               
Conread position:
               
13-294
               

               
Cow position:
               
chr18:35818382-35818094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
13-334
               

               
Cow position:
               
chr18:24342243-24342563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
13-360
               

               
Cow position:
               
chr18:40141273-40140915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
73, 326
               

               
Conread position:
               
13-416
               

               
Cow position:
               
chr18:15881237-15880807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 213
               

               
Conread position:
               
13-561
               

               
Cow position:
               
chr18:3158983-3158410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 153
               

               
Conread position:
               
14-199
               

               
Cow position:
               
chr18:21880705-21880521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
14-400
               

               
Cow position:
               
chr18:33407240-33407636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 77
               

               
Conread position:
               
15-128
               

               
Cow position:
               
chr18:52665340-52665224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
15-331
               

               
Cow position:
               
chr18:5783491-5783166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
74, 107
               

               
Conread position:
               
15-400
               

               
Cow position:
               
chr18:11831762-11832139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
16-300
               

               
Cow position:
               
chr18:17380205-17380479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 54
               

               
Conread position:
               
16-542
               

               
Cow position:
               
chr18:29065754-29065237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 139
               

               
Conread position:
               
17-256
               

               
Cow position:
               
chr18:25164911-25164660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
17-284
               

               
Cow position:
               
chr18:54646112-54646374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
108, 173
               

               
Conread position:
               
18-331
               

               
Cow position:
               
chr18:41270709-41271032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 101
               

               
Conread position:
               
18-527
               

               
Cow position:
               
chr18:54974367-54973872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 17
               

               
Conread position:
               
19-227
               

               
Cow position:
               
chr18:56191580-56191366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
70, 29
               

               
Conread position:
               
20-163
               

               
Cow position:
               
chr18:36907550-36907401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
20-163
               

               
Cow position:
               
chr18:36912076-36911927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
20-189
               

               
Cow position:
               
chr18:41072491-41072667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
20-238
               

               
Cow position:
               
chr18:35472313-35472086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
20-276
               

               
Cow position:
               
chr18:12604267-12604528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 150
               

               
Conread position:
               
20-310
               

               
Cow position:
               
chr18:21528029-21528327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr18:9818464-9818764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr18:19378060-19377746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
20-337
               

               
Cow position:
               
chr18:55396941-55397252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
205, 118
               

               
Conread position:
               
20-360
               

               
Cow position:
               
chr18:56045797-56046149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 317
               

               
Conread position:
               
20-539
               

               
Cow position:
               
chr18:11183566-11184091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 393
               

               
Conread position:
               
20-542
               

               
Cow position:
               
chr18:49200271-49200790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 78
               

               
Conread position:
               
20-557
               

               
Cow position:
               
chr18:6309718-6310250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 64
               

               
Conread position:
               
20-559
               

               
Cow position:
               
chr18:12776149-12775607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 181
               

               
Conread position:
               
21-322
               

               
Cow position:
               
chr18:7056446-7056753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
67, 258
               

               
Conread position:
               
21-479
               

               
Cow position:
               
chr18:2849636-2849169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 232
               

               
Conread position:
               
22-265
               

               
Cow position:
               
chr18:11671435-11671689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
22-322
               

               
Cow position:
               
chr18:19536285-19536595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
22-431
               

               
Cow position:
               
chr18:4672953-4673356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
66, 106
               

               
Conread position:
               
22-564
               

               
Cow position:
               
chr18:16227185-16227739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 260
               

               
Conread position:
               
23-210
               

               
Cow position:
               
chr18:48818625-48818429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
23-240
               

               
Cow position:
               
chr18:49660413-49660191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
66, 202
               

               
Conread position:
               
23-256
               

               
Cow position:
               
chr18:29264824-29264586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
64, 106
               

               
Conread position:
               
23-308
               

               
Cow position:
               
chr18:30843914-30843610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 110
               

               
Conread position:
               
24-336
               

               
Cow position:
               
chr18:40471968-40472292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
24-542
               

               
Cow position:
               
chr18:10575740-10576258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
24-584
               

               
Cow position:
               
chr18:45104819-45104235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 230
               

               
Conread position:
               
25-195
               

               
Cow position:
               
chr18:43504005-43503830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
25-199
               

               
Cow position:
               
chr18:17645942-17646118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
27-197
               

               
Cow position:
               
chr18:53596723-53596894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 65
               

               
Conread position:
               
27-488
               

               
Cow position:
               
chr18:29058861-29058390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 376
               

               
Conread position:
               
28-302
               

               
Cow position:
               
chr18:48407422-48407704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
30-278
               

               
Cow position:
               
chr18:45395627-45395895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr18:17108205-17108417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 55
               

               
Conread position:
               
31-240
               

               
Cow position:
               
chr18:51239877-51240089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
31-385
               

               
Cow position:
               
chr18:2774952-2774601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
32-159
               

               
Cow position:
               
chr18:33896997-33896868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
32-207
               

               
Cow position:
               
chr18:31947264-31947084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-256
               

               
Cow position:
               
chr18:48241578-48241802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr18:31054478-31054188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr18:31213828-31213540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
32-330
               

               
Cow position:
               
chr18:33856053-33855744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
54, 231
               

               
Conread position:
               
33-197
               

               
Cow position:
               
chr18:18371227-18371063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
96, 37
               

               
Conread position:
               
33-280
               

               
Cow position:
               
chr18:46881046-46880785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 257
               

               
Conread position:
               
33-330
               

               
Cow position:
               
chr18:26006294-26005985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 304
               

               
Conread position:
               
34-319
               

               
Cow position:
               
chr18:18562900-18562605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 184
               

               
Conread position:
               
35-210
               

               
Cow position:
               
chr18:39387639-39387463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
35-421
               

               
Cow position:
               
chr18:51826930-51827323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 169
               

               
Conread position:
               
35-431
               

               
Cow position:
               
chr18:4666569-4666164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 110
               

               
Conread position:
               
35-541
               

               
Cow position:
               
chr18:10954120-10954618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
36-210
               

               
Cow position:
               
chr18:43896601-43896422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
36-304
               

               
Cow position:
               
chr18:9846793-9846522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
58, 189
               

               
Conread position:
               
37-207
               

               
Cow position:
               
chr18:32017336-32017517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
37-334
               

               
Cow position:
               
chr18:18627686-18627375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
38-210
               

               
Cow position:
               
chr18:10116922-10117098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
38-212
               

               
Cow position:
               
chr18:51393597-51393426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 58
               

               
Conread position:
               
38-360
               

               
Cow position:
               
chr18:46145444-46145778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
48, 306
               

               
Conread position:
               
38-393
               

               
Cow position:
               
chr18:32121419-32121055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 82
               

               
Conread position:
               
39-188
               

               
Cow position:
               
chr18:11212888-11213041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
39-192
               

               
Cow position:
               
chr18:5076162-5076002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
40-271
               

               
Cow position:
               
chr18:39739933-39740159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
158, 49
               

               
Conread position:
               
40-420
               

               
Cow position:
               
chr18:35797265-35797660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
51, 355
               

               
Conread position:
               
41-210
               

               
Cow position:
               
chr18:23429428-23429601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
41-268
               

               
Cow position:
               
chr18:55757823-55757581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
41-348
               

               
Cow position:
               
chr18:30608175-30608485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
41-443
               

               
Cow position:
               
chr18:33488565-33488146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 137
               

               
Conread position:
               
41-464
               

               
Cow position:
               
chr18:56159104-56159547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
44-212
               

               
Cow position:
               
chr18:40770209-40770382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
47-260
               

               
Cow position:
               
chr18:4078459-4078677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
49, 87
               

               
Conread position:
               
47-310
               

               
Cow position:
               
chr18:2099700-2099428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
47-348
               

               
Cow position:
               
chr18:26343724-26344036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 297
               

               
Conread position:
               
47-348
               

               
Cow position:
               
chr18:40329508-40329820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
39, 297
               

               
Conread position:
               
48-276
               

               
Cow position:
               
chr18:1733531-1733306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
48-360
               

               
Cow position:
               
chr18:47745704-47746028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
36, 289
               

               
Conread position:
               
48-416
               

               
Cow position:
               
chr18:11811629-11811985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 114
               

               
Conread position:
               
49-238
               

               
Cow position:
               
chr18:1216997-1216803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
49-451
               

               
Cow position:
               
chr18:49100717-49100296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
50-542
               

               
Cow position:
               
chr18:56181801-56181303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 151
               

               
Conread position:
               
51-271
               

               
Cow position:
               
chr18:14480134-14480355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr18:35612511-35612781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
51-330
               

               
Cow position:
               
chr18:24956951-24957242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 163
               

               
Conread position:
               
51-337
               

               
Cow position:
               
chr18:13632296-13632006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
40, 177
               

               
Conread position:
               
51-348
               

               
Cow position:
               
chr18:55046229-55046537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 293
               

               
Conread position:
               
51-412
               

               
Cow position:
               
chr18:4749226-4748849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 249
               

               
Conread position:
               
52-412
               

               
Cow position:
               
chr18:48513677-48513308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
78, 58
               

               
Conread position:
               
53-360
               

               
Cow position:
               
chr18:56292252-56292567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
33, 280
               

               
Conread position:
               
53-444
               

               
Cow position:
               
chr18:19619607-19620007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 223
               

               
Conread position:
               
54-321
               

               
Cow position:
               
chr18:52382354-52382632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
54-331
               

               
Cow position:
               
chr18:18958131-18957850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
14, 206
               

               
Conread position:
               
55-322
               

               
Cow position:
               
chr18:8105284-8105012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
55-330
               

               
Cow position:
               
chr18:53897338-53897624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
56-256
               

               
Cow position:
               
chr18:45880356-45880149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 7
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr18:11515157-11514893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
56-314
               

               
Cow position:
               
chr18:51298140-51298404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr18:20980532-20980229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 288
               

               
Conread position:
               
56-360
               

               
Cow position:
               
chr18:47709500-47709820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 285
               

               
Conread position:
               
56-451
               

               
Cow position:
               
chr18:44802223-44801817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
57-237
               

               
Cow position:
               
chr18:3150700-3150508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
57-288
               

               
Cow position:
               
chr18:56172359-56172117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
57-449
               

               
Cow position:
               
chr18:56165644-56166051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
32, 194
               

               
Conread position:
               
57-542
               

               
Cow position:
               
chr18:9365576-9366077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
59-211
               

               
Cow position:
               
chr18:39184396-39184240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
61-360
               

               
Cow position:
               
chr18:24620406-24620716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
24, 282
               

               
Conread position:
               
62-240
               

               
Cow position:
               
chr18:43065178-43065365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
62-360
               

               
Cow position:
               
chr18:40328892-40328582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 282
               

               
Conread position:
               
65-304
               

               
Cow position:
               
chr18:238675-238428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 119
               

               
Conread position:
               
66-256
               

               
Cow position:
               
chr18:52632224-52632411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
66-280
               

               
Cow position:
               
chr18:5991168-5991393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
66-348
               

               
Cow position:
               
chr18:28547053-28546764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
68-276
               

               
Cow position:
               
chr18:52644296-52644077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
68-311
               

               
Cow position:
               
chr18:55584396-55584158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 21
               

               
Conread position:
               
68-322
               

               
Cow position:
               
chr18:50566547-50566805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 39
               

               
Conread position:
               
68-344
               

               
Cow position:
               
chr18:16516926-16516640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
68-365
               

               
Cow position:
               
chr18:17334739-17334432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
68-421
               

               
Cow position:
               
chr18:29958474-29958122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 119
               

               
Conread position:
               
68-559
               

               
Cow position:
               
chr18:11233103-11233593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 257
               

               
Conread position:
               
69-280
               

               
Cow position:
               
chr18:9712728-9712943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
70-308
               

               
Cow position:
               
chr18:25741235-25741485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
71-473
               

               
Cow position:
               
chr18:19273424-19273002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
71-534
               

               
Cow position:
               
chr18:55001061-55000591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 62
               

               
Conread position:
               
74-412
               

               
Cow position:
               
chr18:6275494-6275844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
17, 198
               

               
Conread position:
               
75-385
               

               
Cow position:
               
chr18:44549225-44548908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
59, 123
               

               
Conread position:
               
81-246
               

               
Cow position:
               
chr18:21095264-21095102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
81-541
               

               
Cow position:
               
chr18:26998552-26999043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
48, 291
               

               
Conread position:
               
81-555
               

               
Cow position:
               
chr18:12113679-12113200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 82
               

               
Conread position:
               
82-359
               

               
Cow position:
               
chr18:48036469-48036751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 52
               

               
Conread position:
               
83-238
               

               
Cow position:
               
chr18:5742745-5742587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
47, 5
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr18:51996391-51996611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
83-348
               

               
Cow position:
               
chr18:17429332-17429066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 42
               

               
Conread position:
               
83-564
               

               
Cow position:
               
chr18:54572608-54572111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
6, 100
               

               
Conread position:
               
84-212
               

               
Cow position:
               
chr18:32406068-32405938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
84-249
               

               
Cow position:
               
chr18:46135011-46135176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
84-260
               

               
Cow position:
               
chr18:11231766-11231581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
84-271
               

               
Cow position:
               
chr18:24834904-24834709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
22, 157
               

               
Conread position:
               
84-315
               

               
Cow position:
               
chr18:26586974-26586731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr18:4371458-4371709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
84-330
               

               
Cow position:
               
chr18:41854423-41854168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
84-428
               

               
Cow position:
               
chr18:15025368-15025721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
84-431
               

               
Cow position:
               
chr18:44484067-44483721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
84-550
               

               
Cow position:
               
chr18:3133051-3132610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
84-559
               

               
Cow position:
               
chr18:43823262-43822779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
49, 217
               

               
Conread position:
               
84-588
               

               
Cow position:
               
chr18:26355331-26354837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 42
               

               
Conread position:
               
85-565
               

               
Cow position:
               
chr18:4884823-4884339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 181
               

               
Conread position:
               
86-308
               

               
Cow position:
               
chr18:35552068-35551839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
87-244
               

               
Cow position:
               
chr18:51595346-51595182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr18:2581991-2581762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
88-360
               

               
Cow position:
               
chr18:5761603-5761321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
45, 247
               

               
Conread position:
               
89-348
               

               
Cow position:
               
chr18:26447706-26447974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
44, 252
               

               
Conread position:
               
89-412
               

               
Cow position:
               
chr18:4625596-4625921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
112, 36
               

               
Conread position:
               
89-488
               

               
Cow position:
               
chr18:46727289-46727697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
38, 189
               

               
Conread position:
               
90-307
               

               
Cow position:
               
chr18:52460159-52459948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
92-280
               

               
Cow position:
               
chr18:3422419-3422612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
92-314
               

               
Cow position:
               
chr18:47931161-47930940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
93-238
               

               
Cow position:
               
chr18:24977651-24977504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
93-262
               

               
Cow position:
               
chr18:11694979-11695151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
93-297
               

               
Cow position:
               
chr18:39115444-39115231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
93-320
               

               
Cow position:
               
chr18:11166679-11166912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-322
               

               
Cow position:
               
chr18:4578769-4578535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
40, 178
               

               
Conread position:
               
93-330
               

               
Cow position:
               
chr18:11680420-11680664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 239
               

               
Conread position:
               
93-331
               

               
Cow position:
               
chr18:4515727-4515970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 208
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr18:16258568-16258802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 105
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr18:47868155-47868411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
93-385
               

               
Cow position:
               
chr18:4649035-4648743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
93-397
               

               
Cow position:
               
chr18:23808173-23807872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
93-444
               

               
Cow position:
               
chr18:51211882-51212248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 181
               

               
Conread position:
               
93-458
               

               
Cow position:
               
chr18:20127402-20127026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 152
               

               
Conread position:
               
93-464
               

               
Cow position:
               
chr18:33157521-33157901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
93-487
               

               
Cow position:
               
chr18:25647549-25647141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 317
               

               
Conread position:
               
93-538
               

               
Cow position:
               
chr18:20271320-20270860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
36, 344
               

               
Conread position:
               
93-542
               

               
Cow position:
               
chr18:46048465-46048909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 29
               

               
Conread position:
               
94-194
               

               
Cow position:
               
chr18:36769224-36769123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
94-207
               

               
Cow position:
               
chr18:43114219-43114104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
94-268
               

               
Cow position:
               
chr18:54029568-54029749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
94-272
               

               
Cow position:
               
chr18:1070112-1069931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
94-301
               

               
Cow position:
               
chr18:4421427-4421643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
94-322
               

               
Cow position:
               
chr18:35827714-35827476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
94-329
               

               
Cow position:
               
chr18:30673939-30673700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
36, 183
               

               
Conread position:
               
94-331
               

               
Cow position:
               
chr18:52658120-52658354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 78
               

               
Conread position:
               
94-412
               

               
Cow position:
               
chr18:32876389-32876721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
94-427
               

               
Cow position:
               
chr18:25206491-25206140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 271
               

               
Conread position:
               
94-542
               

               
Cow position:
               
chr18:19143815-19143349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
94-557
               

               
Cow position:
               
chr18:39875559-39875075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 76
               

               
Conread position:
               
95-542
               

               
Cow position:
               
chr18:52637827-52637372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 252
               

               
Conread position:
               
96-251
               

               
Cow position:
               
chr18:21067643-21067801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
96-299
               

               
Cow position:
               
chr18:50700368-50700581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr18:22214189-22214411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
96-345
               

               
Cow position:
               
chr18:26335112-26334854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
96-346
               

               
Cow position:
               
chr18:37703141-37702902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 61
               

               
Conread position:
               
96-415
               

               
Cow position:
               
chr18:13359765-13360090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
96-431
               

               
Cow position:
               
chr18:5578007-5578359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 283
               

               
Conread position:
               
96-540
               

               
Cow position:
               
chr18:33158657-33159096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
96-541
               

               
Cow position:
               
chr18:3115163-3115610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 244
               

               
Conread position:
               
96-542
               

               
Cow position:
               
chr18:10904549-10905002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
97-319
               

               
Cow position:
               
chr18:48290734-48290512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
36, 178
               

               
Conread position:
               
97-412
               

               
Cow position:
               
chr18:9557685-9558011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
117, 35
               

               
Conread position:
               
97-457
               

               
Cow position:
               
chr18:11684694-11685060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
97-540
               

               
Cow position:
               
chr18:42455316-42454866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
97-542
               

               
Cow position:
               
chr18:1144489-1144037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
33, 45
               

               
Conread position:
               
97-560
               

               
Cow position:
               
chr18:18919249-18918788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
98-421
               

               
Cow position:
               
chr18:6610153-6609815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
29, 93
               

               
Conread position:
               
98-553
               

               
Cow position:
               
chr18:55789287-55788826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
35, 201
               

               
Conread position:
               
98-560
               

               
Cow position:
               
chr18:56183643-56184125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 195
               

               
Conread position:
               
99-561
               

               
Cow position:
               
chr18:32873289-32873776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 218
               

               
Conread position:
               
100-245
               

               
Cow position:
               
chr18:36265076-36264930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 30
               

               
Conread position:
               
100-412
               

               
Cow position:
               
chr18:56145383-56145703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
18, 152
               

               
Conread position:
               
100-451
               

               
Cow position:
               
chr18:29759759-29760099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
100-592
               

               
Cow position:
               
chr18:50381964-50382458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 169
               

               
Conread position:
               
101-308
               

               
Cow position:
               
chr18:34681494-34681279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
101-321
               

               
Cow position:
               
chr18:268103-267884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
29, 75
               

               
Conread position:
               
101-360
               

               
Cow position:
               
chr18:56023462-56023197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 48
               

               
Conread position:
               
101-386
               

               
Cow position:
               
chr18:47517500-47517210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
29, 100
               

               
Conread position:
               
101-517
               

               
Cow position:
               
chr18:5995180-5995601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
32, 55
               

               
Conread position:
               
101-560
               

               
Cow position:
               
chr18:15614136-15613692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 24
               

               
Conread position:
               
102-421
               

               
Cow position:
               
chr18:19387289-19387614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 149
               

               
Conread position:
               
102-564
               

               
Cow position:
               
chr18:31725175-31724698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 28
               

               
Conread position:
               
102-582
               

               
Cow position:
               
chr18:46453170-46452686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 191
               

               
Conread position:
               
103-270
               

               
Cow position:
               
chr18:24047958-24048122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
103-322
               

               
Cow position:
               
chr18:31586654-31586434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
38, 123
               

               
Conread position:
               
103-337
               

               
Cow position:
               
chr18:54658011-54658258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
103-405
               

               
Cow position:
               
chr18:21175890-21176213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 290
               

               
Conread position:
               
103-542
               

               
Cow position:
               
chr18:38985397-38985846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 365
               

               
Conread position:
               
103-556
               

               
Cow position:
               
chr18:42479870-42479411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 29
               

               
Conread position:
               
104-240
               

               
Cow position:
               
chr18:47779167-47779307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
104-256
               

               
Cow position:
               
chr18:2439010-2438855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
104-280
               

               
Cow position:
               
chr18:56163298-56163478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
104-336
               

               
Cow position:
               
chr18:23652902-23652675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 140
               

               
Conread position:
               
104-463
               

               
Cow position:
               
chr18:38344515-38344889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
104-496
               

               
Cow position:
               
chr18:28924121-28923730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 49
               

               
Conread position:
               
104-542
               

               
Cow position:
               
chr18:10891238-10891666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
62, 37
               

               
Conread position:
               
104-542
               

               
Cow position:
               
chr18:55498777-55499225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
107, 29
               

               
Conread position:
               
105-321
               

               
Cow position:
               
chr18:52868907-52869133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 174
               

               
Conread position:
               
105-348
               

               
Cow position:
               
chr18:35258390-35258645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 240
               

               
Conread position:
               
105-464
               

               
Cow position:
               
chr18:25282843-25282469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
28, 286
               

               
Conread position:
               
105-563
               

               
Cow position:
               
chr18:43806163-43806629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 308
               

               
Conread position:
               
106-237
               

               
Cow position:
               
chr18:19831010-19831140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
106-360
               

               
Cow position:
               
chr18:16462278-16462018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
106-477
               

               
Cow position:
               
chr18:21192697-21192313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
24, 90
               

               
Conread position:
               
107-487
               

               
Cow position:
               
chr18:36230997-36230617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
110-540
               

               
Cow position:
               
chr18:2592456-2592007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 277
               

               
Conread position:
               
111-238
               

               
Cow position:
               
chr18:2569518-2569653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
111-240
               

               
Cow position:
               
chr18:5247801-5247668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
111-273
               

               
Cow position:
               
chr18:18976802-18976975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr18:51656335-51656103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 226
               

               
Conread position:
               
112-557
               

               
Cow position:
               
chr18:11691691-11691236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 368
               

               
Conread position:
               
113-338
               

               
Cow position:
               
chr18:34325238-34325007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
85, 220
               

               
Conread position:
               
114-337
               

               
Cow position:
               
chr18:29649972-29649740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 167
               

               
Conread position:
               
114-559
               

               
Cow position:
               
chr18:4668773-4668332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
23, 176
               

               
Conread position:
               
115-336
               

               
Cow position:
               
chr18:52864594-52864364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 212
               

               
Conread position:
               
122-385
               

               
Cow position:
               
chr18:20482144-20481878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
20, 147
               

               
Conread position:
               
124-322
               

               
Cow position:
               
chr18:24946079-24945874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 26
               

               
Conread position:
               
126-265
               

               
Cow position:
               
chr18:52402783-52402640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
126-290
               

               
Cow position:
               
chr18:5711932-5711766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
126-318
               

               
Cow position:
               
chr18:19761433-19761624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 148
               

               
Conread position:
               
126-444
               

               
Cow position:
               
chr18:7952381-7952702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 171
               

               
Conread position:
               
126-488
               

               
Cow position:
               
chr18:21768362-21768724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 209
               

               
Conread position:
               
126-540
               

               
Cow position:
               
chr18:4490139-4489748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
277, 72
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr18:3044167-3044612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
127-265
               

               
Cow position:
               
chr18:20797836-20797975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
127-470
               

               
Cow position:
               
chr18:10322536-10322896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
85, 187
               

               
Conread position:
               
127-485
               

               
Cow position:
               
chr18:48453429-48453776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 151
               

               
Conread position:
               
127-560
               

               
Cow position:
               
chr18:12058753-12059166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
68, 100
               

               
Conread position:
               
129-321
               

               
Cow position:
               
chr18:35582364-35582168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
129-363
               

               
Cow position:
               
chr18:7058967-7059196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 139
               

               
Conread position:
               
130-563
               

               
Cow position:
               
chr18:42431870-42431440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
132-322
               

               
Cow position:
               
chr18:8164299-8164103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
132-415
               

               
Cow position:
               
chr18:22411876-22411575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
132-539
               

               
Cow position:
               
chr18:37382357-37381939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
64, 315
               

               
Conread position:
               
132-561
               

               
Cow position:
               
chr18:12023892-12023465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 223
               

               
Conread position:
               
133-559
               

               
Cow position:
               
chr18:22056112-22055689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
170, 49
               

               
Conread position:
               
139-539
               

               
Cow position:
               
chr18:55709787-55710178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
139-542
               

               
Cow position:
               
chr18:17649988-17649584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
101, 61
               

               
Conread position:
               
142-435
               

               
Cow position:
               
chr18:25984823-25984510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr18:32883053-32883403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
49, 258
               

               
Conread position:
               
144-472
               

               
Cow position:
               
chr18:48713306-48713642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
173, 54
               

               
Conread position:
               
147-399
               

               
Cow position:
               
chr18:12809615-12809873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 238
               

               
Conread position:
               
150-549
               

               
Cow position:
               
chr18:3018320-3017927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
150-550
               

               
Cow position:
               
chr18:33007815-33008247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 330
               

               
Conread position:
               
150-557
               

               
Cow position:
               
chr18:17391215-17390820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 59
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr18:42432329-42431921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 40
               

               
Conread position:
               
152-328
               

               
Cow position:
               
chr18:24636275-24636440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
152-329
               

               
Cow position:
               
chr18:28823208-28823025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
152-539
               

               
Cow position:
               
chr18:18592233-18592616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
155-550
               

               
Cow position:
               
chr18:4496124-4495727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 276
               

               
Conread position:
               
156-330
               

               
Cow position:
               
chr18:14872101-14871927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 120
               

               
Conread position:
               
157-319
               

               
Cow position:
               
chr18:15340674-15340516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
157-486
               

               
Cow position:
               
chr18:43020624-43020297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 56
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr18:10977444-10977043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
158-559
               

               
Cow position:
               
chr18:33896656-33896242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 42
               

               
Conread position:
               
159-321
               

               
Cow position:
               
chr18:219100-219267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
167-542
               

               
Cow position:
               
chr18:16545690-16545307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
45, 91
               

               
Conread position:
               
172-488
               

               
Cow position:
               
chr18:45637615-45637309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
42, 104
               

               
Conread position:
               
177-395
               

               
Cow position:
               
chr18:54056344-54056564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 136
               

               
Conread position:
               
177-561
               

               
Cow position:
               
chr18:1954808-1954406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
178-352
               

               
Cow position:
               
chr18:18868530-18868712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
178-461
               

               
Cow position:
               
chr18:52877170-52877442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 21
               

               
Conread position:
               
186-563
               

               
Cow position:
               
chr18:7108920-7109304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 264
               

               
Conread position:
               
197-561
               

               
Cow position:
               
chr18:1399544-1399178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
126, 277
               

               
Conread position:
               
198-549
               

               
Cow position:
               
chr18:8299822-8300187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
65, 262
               

               
Conread position:
               
201-431
               

               
Cow position:
               
chr18:16686525-16686283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
203-564
               

               
Cow position:
               
chr18:15517351-15516996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
205-487
               

               
Cow position:
               
chr18:51190775-51190491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
209-474
               

               
Cow position:
               
chr18:21740990-21740721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 261
               

               
Conread position:
               
220-544
               

               
Cow position:
               
chr18:48633623-48633934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
227-555
               

               
Cow position:
               
chr18:4556331-4555996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
232-542
               

               
Cow position:
               
chr18:20462851-20462552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr18:46135591-46135836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 60
               

               
Conread position:
               
238-562
               

               
Cow position:
               
chr18:1571388-1571068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
239-461
               

               
Cow position:
               
chr18:51594952-51594722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
82, 29
               

               
Conread position:
               
253-451
               

               
Cow position:
               
chr18:25006625-25006421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
253-542
               

               
Cow position:
               
chr18:49841142-49841438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
270-548
               

               
Cow position:
               
chr18:49038340-49038615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 199
               

               
Conread position:
               
276-542
               

               
Cow position:
               
chr18:41950103-41950368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 126
               

               
Conread position:
               
276-542
               

               
Cow position:
               
chr18:51178830-51178558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
280-488
               

               
Cow position:
               
chr18:7076847-7077061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 168
               

               
Conread position:
               
284-550
               

               
Cow position:
               
chr18:34220027-34219743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 189
               

               
Conread position:
               
286-568
               

               
Cow position:
               
chr18:43797057-43796778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 167
               

               
Conread position:
               
287-487
               

               
Cow position:
               
chr18:49324526-49324326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
176, 39
               

               
Conread position:
               
293-458
               

               
Cow position:
               
chr18:35367283-35367116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
296-542
               

               
Cow position:
               
chr18:47548070-47547827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
311-592
               

               
Cow position:
               
chr18:52251928-52251648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
325-563
               

               
Cow position:
               
chr18:25598294-25598058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
326-531
               

               
Cow position:
               
chr18:34834441-34834640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr18:38937767-38937975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr18:52649402-52649184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
326-558
               

               
Cow position:
               
chr18:51383450-51383227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 21
               

               
Conread position:
               
326-560
               

               
Cow position:
               
chr18:35535201-35534977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
326-563
               

               
Cow position:
               
chr18:2773447-2773210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
326-563
               

               
Cow position:
               
chr18:2776950-2776713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
329-540
               

               
Cow position:
               
chr18:53038778-53039002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
329-558
               

               
Cow position:
               
chr18:32252220-32251994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
330-577
               

               
Cow position:
               
chr18:22569117-22568878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
333-558
               

               
Cow position:
               
chr18:50632490-50632274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
69, 118
               

               
Conread position:
               
340-542
               

               
Cow position:
               
chr18:11672002-11672208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
348-542
               

               
Cow position:
               
chr18:35786023-35786208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 113
               

               
Conread position:
               
353-559
               

               
Cow position:
               
chr18:49603071-49602871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
378-559
               

               
Cow position:
               
chr18:42978648-42978461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 175
               
Show alignments to all cow chromosomes.