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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8003H20.3
        

               
Conread position:
               
1-100
               

               
Cow position:
               
chr23:5721363-5721264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-104
               

               
Cow position:
               
chr23:2269674-2269571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chr23:4005550-4005656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-131
               

               
Cow position:
               
chr23:11079125-11079254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr23:34264874-34264725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
1-189
               

               
Cow position:
               
chr23:19737485-19737292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr23:7311511-7311712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr23:20980484-20980687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 73
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr23:35937662-35937871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr23:25565841-25566061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 193
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr23:16072869-16073093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr23:778319-778076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
100, 83
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr23:27529649-27529412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 213
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:1760188-1760417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
125, 70
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:9222998-9223227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:9712752-9712998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:11973500-11973746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:14642558-14642311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 182
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr23:26322786-26322549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
84, 195
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:14566084-14565831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:15003644-15003885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:25362982-25363233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr23:26824631-26824863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 185
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr23:3167881-3168139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:666468-666219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr23:11010030-11009784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
133, 57
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:20001715-20001959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 192
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr23:1696468-1696722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 137
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr23:20586073-20585816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 169
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr23:16170336-16170594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
87, 232
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr23:1719154-1719438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
88, 206
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr23:35926238-35926514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 73
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr23:28118461-28118177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr23:40734688-40734383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 226
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr23:14191190-14191516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 107
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr23:15056987-15056679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 30
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr23:37992635-37992948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr23:2371019-2371338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 129
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr23:3208977-3208656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 83
               

               
Conread position:
               
1-320
               

               
Cow position:
               
chr23:615263-614936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
63, 101
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr23:1670560-1670869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
85, 48
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr23:406518-406204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 38
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr23:8005894-8006210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr23:15729048-15728726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr23:16610171-16609833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-330
               

               
Cow position:
               
chr23:4608747-4608405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr23:1647258-1647596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
88, 216
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr23:3727760-3727419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr23:37190937-37190606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 198
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr23:11434628-11434280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 211
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr23:18491807-18492151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr23:1009760-1009420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr23:3904631-3904960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 18
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr23:17796678-17796326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 169
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr23:10415385-10415041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 83
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr23:479167-479529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
88, 34
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr23:6720638-6720290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
46, 192
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr23:33658200-33657845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chr23:14862791-14862448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 58
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr23:15710438-15710060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 162
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr23:36146806-36146433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr23:8959238-8959640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 135
               

               
Conread position:
               
1-400
               

               
Cow position:
               
chr23:29441361-29440949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 366
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr23:1254310-1254747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr23:7175262-7175679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 264
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr23:416809-417218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 101
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr23:14839093-14838672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 196
               

               
Conread position:
               
1-432
               

               
Cow position:
               
chr23:27996777-27997217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 100
               

               
Conread position:
               
1-441
               

               
Cow position:
               
chr23:353939-353508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr23:24866945-24867409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 83
               

               
Conread position:
               
1-444
               

               
Cow position:
               
chr23:1721363-1720882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 211
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr23:16700380-16699917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
1-481
               

               
Cow position:
               
chr23:13598993-13599476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 52
               

               
Conread position:
               
1-483
               

               
Cow position:
               
chr23:1924194-1923700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr23:13511375-13511866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 173
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr23:30662985-30662494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 123
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr23:1398395-1397898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 114
               

               
Conread position:
               
1-488
               

               
Cow position:
               
chr23:18698388-18697883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 209
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr23:1700561-1701049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 132
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr23:14739092-14739611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 244
               

               
Conread position:
               
1-515
               

               
Cow position:
               
chr23:7835855-7835320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr23:5870548-5870013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 317
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr23:9874324-9874850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 78
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:4579398-4578843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 274
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:7844928-7845479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 445
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:11128872-11129427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:24509342-24509875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:25865040-25864503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 202
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:31493523-31494058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
1-542
               

               
Cow position:
               
chr23:40502863-40502321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 125
               

               
Conread position:
               
1-551
               

               
Cow position:
               
chr23:18802634-18802067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 434
               

               
Conread position:
               
1-554
               

               
Cow position:
               
chr23:34315329-34314749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr23:344536-343970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 340
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr23:4996445-4995888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr23:13520097-13520653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 107
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr23:20744950-20744372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 290
               

               
Conread position:
               
1-559
               

               
Cow position:
               
chr23:25676030-25675488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
129, 73
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr23:533871-534438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 254
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr23:1430161-1429619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 280
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr23:8698085-8698637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr23:16246383-16246950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr23:22530767-22530226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 88
               

               
Conread position:
               
1-563
               

               
Cow position:
               
chr23:28206254-28206814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
1-576
               

               
Cow position:
               
chr23:40777902-40778492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 390
               

               
Conread position:
               
1-604
               

               
Cow position:
               
chr23:1535961-1536574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 218
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr23:19910311-19910103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
2-210
               

               
Cow position:
               
chr23:40081105-40081319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
2-217
               

               
Cow position:
               
chr23:5738088-5737868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr23:16058239-16058525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
87, 255
               

               
Conread position:
               
2-287
               

               
Cow position:
               
chr23:5691114-5690829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
92, 133
               

               
Conread position:
               
2-297
               

               
Cow position:
               
chr23:26741810-26741514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 193
               

               
Conread position:
               
2-314
               

               
Cow position:
               
chr23:792382-792072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
2-320
               

               
Cow position:
               
chr23:25408477-25408799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
2-321
               

               
Cow position:
               
chr23:7402346-7402671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 199
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr23:32961736-32961380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 333
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr23:6158566-6158210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 127
               

               
Conread position:
               
2-405
               

               
Cow position:
               
chr23:34416209-34416623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 175
               

               
Conread position:
               
2-414
               

               
Cow position:
               
chr23:1604867-1605299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 116
               

               
Conread position:
               
2-453
               

               
Cow position:
               
chr23:18797063-18796594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
102, 320
               

               
Conread position:
               
2-542
               

               
Cow position:
               
chr23:22298380-22297839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 181
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr23:1640451-1641017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 284
               

               
Conread position:
               
2-561
               

               
Cow position:
               
chr23:26986641-26986060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 192
               

               
Conread position:
               
3-112
               

               
Cow position:
               
chr23:2261158-2261052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-122
               

               
Cow position:
               
chr23:22031595-22031474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr23:7324395-7324522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr23:11163337-11163210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 122
               

               
Conread position:
               
3-128
               

               
Cow position:
               
chr23:26798046-26797920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 28
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr23:953948-953817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr23:5441770-5441901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-131
               

               
Cow position:
               
chr23:20977584-20977715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-181
               

               
Cow position:
               
chr23:922058-922241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr23:26230967-26231151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
130, 84
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr23:30588862-30589054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-207
               

               
Cow position:
               
chr23:31585155-31585364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-209
               

               
Cow position:
               
chr23:35374979-35374782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr23:18487391-18487603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr23:18655527-18655739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr23:34855021-34854811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 184
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:977197-976983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:10936443-10936229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:14576065-14576279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:14910584-14910371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:28076522-28076308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:31606281-31606495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:39207266-39207053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr23:39745713-39745927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr23:38708850-38709073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-239
               

               
Cow position:
               
chr23:29467088-29466854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
198, 127
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr23:14896154-14895915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
3-240
               

               
Cow position:
               
chr23:26003705-26003949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-257
               

               
Cow position:
               
chr23:4067766-4068016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
133, 75
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr23:672023-672292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr23:2320095-2319825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr23:292683-292958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-268
               

               
Cow position:
               
chr23:25336652-25336375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr23:3328269-3327991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr23:7294044-7294328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr23:15569415-15569700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr23:20734148-20734421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
83, 231
               

               
Conread position:
               
3-291
               

               
Cow position:
               
chr23:15702864-15702566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
81, 150
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr23:16383831-16383524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
91, 16
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr23:32007576-32007271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 193
               

               
Conread position:
               
3-304
               

               
Cow position:
               
chr23:573414-573095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr23:11459381-11459065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-307
               

               
Cow position:
               
chr23:14215383-14215067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:4855995-4855677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:7852312-7851995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:8708245-8708562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 284
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:11965469-11965152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
86, 126
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:19056512-19056197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:25562485-25562169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:27314596-27314913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:28222707-28223011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 130
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:31353988-31354305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:32650433-32650115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
86, 172
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:32657543-32657862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr23:38934380-38934067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 220
               

               
Conread position:
               
3-311
               

               
Cow position:
               
chr23:3321821-3322141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-320
               

               
Cow position:
               
chr23:30656516-30656208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
163, 80
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr23:40780969-40781291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 298
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:3717015-3717350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:12864541-12864872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
81, 184
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:15764180-15764510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
81, 277
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:17678250-17677924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
83, 277
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:19202988-19202656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
83, 205
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:21351102-21350771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
81, 133
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr23:27735066-27735396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 185
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr23:14266172-14266502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
79, 216
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr23:3286598-3286938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr23:6442642-6442304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr23:28120143-28120478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 152
               

               
Conread position:
               
3-329
               

               
Cow position:
               
chr23:28359004-28358671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
128, 148
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:1113805-1114144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:1131746-1132087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:2531692-2531371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
211, 127
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:4267289-4267628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:7494467-7494806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:9267010-9266670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:10840723-10841062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:11070917-11071256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:21772055-21771716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:25352214-25352553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr23:40710774-40711108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr23:30622553-30622214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr23:3710554-3710894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
86, 229
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr23:33074869-33075224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 343
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:1582020-1582375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 270
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:2528545-2528189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 284
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:2723599-2723955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:3825183-3824827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:3827237-3826881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:3873432-3873076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 338
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:4079998-4079642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:5458592-5458949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
83, 342
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:11080238-11080594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:11711860-11711504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
83, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:14385855-14385501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 298
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:17848250-17848605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 311
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:20455980-20455624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:25380935-25381291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:26373806-26374162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:26932449-26932093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:28085007-28085363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:28622045-28621689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:31126963-31126607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr23:39110735-39111091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr23:31607531-31607151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
81, 378
               

               
Conread position:
               
3-359
               

               
Cow position:
               
chr23:3734595-3734227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:610554-610923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:4293289-4293653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:11409618-11409249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:15020767-15021136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:15271596-15271227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:20545734-20545365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:22011124-22011493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:27423718-27424087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 341
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:29043637-29044006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 334
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:31638461-31638828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 322
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:35284666-35284298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 336
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:39747889-39748258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
48, 324
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr23:40774181-40774550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 280
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr23:26829096-26829459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
86, 125
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr23:38580944-38581314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr23:41285580-41285942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
3-379
               

               
Cow position:
               
chr23:7900169-7899794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 81
               

               
Conread position:
               
3-401
               

               
Cow position:
               
chr23:9595188-9594780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 158
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr23:35070125-35070538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 212
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr23:36129258-36128845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr23:39784610-39785033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 403
               

               
Conread position:
               
3-414
               

               
Cow position:
               
chr23:18322776-18322356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 69
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr23:27564053-27563629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
3-428
               

               
Cow position:
               
chr23:34347977-34348400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 145
               

               
Conread position:
               
3-450
               

               
Cow position:
               
chr23:25669425-25668985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr23:19002427-19001951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 187
               

               
Conread position:
               
3-461
               

               
Cow position:
               
chr23:6593069-6592590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 209
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr23:9268230-9268716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 318
               

               
Conread position:
               
3-487
               

               
Cow position:
               
chr23:7596687-7596210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 153
               

               
Conread position:
               
3-542
               

               
Cow position:
               
chr23:21789130-21788578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 308
               

               
Conread position:
               
3-558
               

               
Cow position:
               
chr23:9734061-9734625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
3-558
               

               
Cow position:
               
chr23:10852696-10853255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 187
               

               
Conread position:
               
3-564
               

               
Cow position:
               
chr23:39049771-39049227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
3-568
               

               
Cow position:
               
chr23:38455543-38454947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 11
               

               
Conread position:
               
4-128
               

               
Cow position:
               
chr23:14969945-14969818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr23:39762010-39762194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 103
               

               
Conread position:
               
4-197
               

               
Cow position:
               
chr23:18204127-18204321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr23:39235726-39235520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
85, 5
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr23:3549341-3549128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr23:29811291-29811506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 204
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr23:30912660-30912411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr23:36688182-36687940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-322
               

               
Cow position:
               
chr23:2369635-2369954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
80, 224
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr23:3208569-3208214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 340
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr23:10873807-10873452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 340
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr23:10518090-10517739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 215
               

               
Conread position:
               
5-240
               

               
Cow position:
               
chr23:28361173-28360923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
5, 211
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr23:27402989-27403294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
84, 151
               

               
Conread position:
               
5-412
               

               
Cow position:
               
chr23:24098981-24099409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
84, 100
               

               
Conread position:
               
5-441
               

               
Cow position:
               
chr23:26319061-26319501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 27
               

               
Conread position:
               
6-210
               

               
Cow position:
               
chr23:30364353-30364148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr23:27963702-27963337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 69
               

               
Conread position:
               
7-278
               

               
Cow position:
               
chr23:1321546-1321276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 191
               

               
Conread position:
               
7-308
               

               
Cow position:
               
chr23:221715-222022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 179
               

               
Conread position:
               
7-488
               

               
Cow position:
               
chr23:11473861-11473361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr23:1240706-1240918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr23:17876048-17875826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
8-560
               

               
Cow position:
               
chr23:1289949-1290520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 116
               

               
Conread position:
               
9-112
               

               
Cow position:
               
chr23:1065665-1065771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-118
               

               
Cow position:
               
chr23:4100737-4100849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-199
               

               
Cow position:
               
chr23:496952-496758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 185
               

               
Conread position:
               
9-210
               

               
Cow position:
               
chr23:35653750-35653953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
9-212
               

               
Cow position:
               
chr23:12570793-12570585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-213
               

               
Cow position:
               
chr23:22170765-22170974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr23:11084020-11083808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
9-214
               

               
Cow position:
               
chr23:27972328-27972538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
82, 47
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr23:281407-281619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 177
               

               
Conread position:
               
9-215
               

               
Cow position:
               
chr23:25086413-25086206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 114
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr23:28026497-28026721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
92, 47
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr23:28111580-28111804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
80, 47
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr23:19967279-19967502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
9-229
               

               
Cow position:
               
chr23:22143167-22142942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 219
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr23:28232151-28231906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 162
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr23:28366680-28366441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 231
               

               
Conread position:
               
9-240
               

               
Cow position:
               
chr23:31277359-31277589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 174
               

               
Conread position:
               
9-249
               

               
Cow position:
               
chr23:208490-208728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 122
               

               
Conread position:
               
9-267
               

               
Cow position:
               
chr23:9517815-9517549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
75, 240
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr23:2790916-2790647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
9-268
               

               
Cow position:
               
chr23:14245157-14245426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 189
               

               
Conread position:
               
9-275
               

               
Cow position:
               
chr23:11559372-11559092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
75, 230
               

               
Conread position:
               
9-282
               

               
Cow position:
               
chr23:24504896-24505177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
80, 144
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr23:11376484-11376179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr23:40825641-40825944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
115, 134
               

               
Conread position:
               
9-307
               

               
Cow position:
               
chr23:28183431-28183741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
9-308
               

               
Cow position:
               
chr23:8308676-8308365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr23:18367343-18367669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr23:23470598-23470903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr23:39793097-39793418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 162
               

               
Conread position:
               
9-322
               

               
Cow position:
               
chr23:39806510-39806834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 209
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr23:805971-806304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
9-330
               

               
Cow position:
               
chr23:4437466-4437798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr23:24120414-24120750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
75, 281
               

               
Conread position:
               
9-348
               

               
Cow position:
               
chr23:2311899-2311549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
77, 335
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr23:32052239-32052604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 333
               

               
Conread position:
               
9-364
               

               
Cow position:
               
chr23:8930464-8930118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 56
               

               
Conread position:
               
9-416
               

               
Cow position:
               
chr23:19636616-19636191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 243
               

               
Conread position:
               
9-444
               

               
Cow position:
               
chr23:11844938-11845376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
9-477
               

               
Cow position:
               
chr23:33601873-33601403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
9-481
               

               
Cow position:
               
chr23:20435405-20434928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 210
               

               
Conread position:
               
9-540
               

               
Cow position:
               
chr23:14164756-14164187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
9-542
               

               
Cow position:
               
chr23:41472262-41472816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
9-559
               

               
Cow position:
               
chr23:3485300-3485862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
10-112
               

               
Cow position:
               
chr23:31609814-31609709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-127
               

               
Cow position:
               
chr23:13408948-13409068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-158
               

               
Cow position:
               
chr23:10960816-10960967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-194
               

               
Cow position:
               
chr23:13945405-13945594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr23:772299-772503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
10-209
               

               
Cow position:
               
chr23:15214994-15214794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
79, 114
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr23:28987891-28988098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr23:30752193-30751986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 174
               

               
Conread position:
               
10-212
               

               
Cow position:
               
chr23:31827363-31827570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr23:28079481-28079709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr23:5151629-5151877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
10-240
               

               
Cow position:
               
chr23:8911127-8911359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 37
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr23:25883328-25883576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr23:1047227-1046973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
79, 172
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr23:37198467-37198200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
89, 84
               

               
Conread position:
               
10-268
               

               
Cow position:
               
chr23:40553281-40553011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-279
               

               
Cow position:
               
chr23:9235417-9235145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 204
               

               
Conread position:
               
10-304
               

               
Cow position:
               
chr23:4892557-4892856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 165
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr23:39389912-39390221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:3877319-3877013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:4273829-4274139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:5623720-5623411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:11344352-11344661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:16172307-16172617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:17846964-17847264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr23:19493713-19494023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
85, 118
               

               
Conread position:
               
10-321
               

               
Cow position:
               
chr23:27861987-27862298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
30, 57
               

               
Conread position:
               
10-330
               

               
Cow position:
               
chr23:29447394-29447069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
50, 283
               

               
Conread position:
               
10-331
               

               
Cow position:
               
chr23:28052925-28053251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 266
               

               
Conread position:
               
10-338
               

               
Cow position:
               
chr23:39741087-39740755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 98
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr23:11782646-11783011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr23:36027393-36027033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
79, 254
               

               
Conread position:
               
10-364
               

               
Cow position:
               
chr23:10843974-10844312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
116, 175
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr23:4636491-4636117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
79, 302
               

               
Conread position:
               
10-369
               

               
Cow position:
               
chr23:28916188-28916557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
79, 177
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr23:1959983-1960404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 283
               

               
Conread position:
               
10-412
               

               
Cow position:
               
chr23:15180801-15181216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
79, 107
               

               
Conread position:
               
10-415
               

               
Cow position:
               
chr23:10554363-10553937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
10-528
               

               
Cow position:
               
chr23:7392635-7392122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 170
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr23:21336841-21336278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 194
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr23:22804372-22804913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 406
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr23:2520408-2520164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 174
               

               
Conread position:
               
11-248
               

               
Cow position:
               
chr23:31395280-31395037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 76
               

               
Conread position:
               
11-268
               

               
Cow position:
               
chr23:40633529-40633260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
11-276
               

               
Cow position:
               
chr23:39126225-39125966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 111
               

               
Conread position:
               
11-321
               

               
Cow position:
               
chr23:39028450-39028747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
78, 118
               

               
Conread position:
               
11-330
               

               
Cow position:
               
chr23:16495420-16495092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
80, 51
               

               
Conread position:
               
11-348
               

               
Cow position:
               
chr23:26932799-26933147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 333
               

               
Conread position:
               
11-361
               

               
Cow position:
               
chr23:7429099-7429463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
78, 311
               

               
Conread position:
               
11-369
               

               
Cow position:
               
chr23:7791264-7790904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
81, 208
               

               
Conread position:
               
12-129
               

               
Cow position:
               
chr23:2721580-2721697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
12-157
               

               
Cow position:
               
chr23:9231886-9231737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
12-168
               

               
Cow position:
               
chr23:35929651-35929816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
12-209
               

               
Cow position:
               
chr23:15529436-15529634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
114, 82
               

               
Conread position:
               
12-240
               

               
Cow position:
               
chr23:15657143-15656916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr23:30633730-30633426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
12-330
               

               
Cow position:
               
chr23:28032091-28032415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 143
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr23:2021804-2021393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
77, 96
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr23:28306704-28307125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
12-451
               

               
Cow position:
               
chr23:5389358-5389806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 47
               

               
Conread position:
               
12-563
               

               
Cow position:
               
chr23:4529242-4528656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 455
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr23:14958026-14957726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
13-314
               

               
Cow position:
               
chr23:7750843-7751141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
13-410
               

               
Cow position:
               
chr23:40526321-40525916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
13-559
               

               
Cow position:
               
chr23:2179996-2179453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
74, 174
               

               
Conread position:
               
13-563
               

               
Cow position:
               
chr23:34356309-34356857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 116
               

               
Conread position:
               
15-229
               

               
Cow position:
               
chr23:39813102-39813319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 124
               

               
Conread position:
               
15-421
               

               
Cow position:
               
chr23:32309334-32309763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 178
               

               
Conread position:
               
16-325
               

               
Cow position:
               
chr23:12896953-12896639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 239
               

               
Conread position:
               
16-430
               

               
Cow position:
               
chr23:4980878-4980460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 24
               

               
Conread position:
               
17-226
               

               
Cow position:
               
chr23:9133011-9132794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr23:26435802-26435569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
18-252
               

               
Cow position:
               
chr23:35369354-35369114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
73, 231
               

               
Conread position:
               
20-322
               

               
Cow position:
               
chr23:30334471-30334159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
20-346
               

               
Cow position:
               
chr23:29824406-29824083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 118
               

               
Conread position:
               
20-352
               

               
Cow position:
               
chr23:8327320-8327666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
68, 320
               

               
Conread position:
               
20-353
               

               
Cow position:
               
chr23:32555517-32555174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
61, 299
               

               
Conread position:
               
20-439
               

               
Cow position:
               
chr23:10014206-10014625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 158
               

               
Conread position:
               
20-574
               

               
Cow position:
               
chr23:26841114-26841645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 60
               

               
Conread position:
               
21-240
               

               
Cow position:
               
chr23:2802648-2802407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 205
               

               
Conread position:
               
21-322
               

               
Cow position:
               
chr23:4531919-4531601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
22-181
               

               
Cow position:
               
chr23:7374534-7374698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
22-542
               

               
Cow position:
               
chr23:37065501-37066047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
23-239
               

               
Cow position:
               
chr23:29175650-29175869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
107, 78
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr23:27378137-27378486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 242
               

               
Conread position:
               
23-563
               

               
Cow position:
               
chr23:5162088-5162659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 191
               

               
Conread position:
               
23-568
               

               
Cow position:
               
chr23:39778077-39778617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 153
               

               
Conread position:
               
24-240
               

               
Cow position:
               
chr23:22574396-22574180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
24-444
               

               
Cow position:
               
chr23:2799232-2799681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
25-322
               

               
Cow position:
               
chr23:3745267-3745576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 143
               

               
Conread position:
               
25-421
               

               
Cow position:
               
chr23:39752777-39753192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 275
               

               
Conread position:
               
26-337
               

               
Cow position:
               
chr23:6995302-6995001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
288, 106
               

               
Conread position:
               
27-459
               

               
Cow position:
               
chr23:6223675-6224089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
288, 36
               

               
Conread position:
               
27-563
               

               
Cow position:
               
chr23:1337649-1337091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 133
               

               
Conread position:
               
28-542
               

               
Cow position:
               
chr23:1745358-1745862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
102, 137
               

               
Conread position:
               
31-265
               

               
Cow position:
               
chr23:1664360-1664601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
31-539
               

               
Cow position:
               
chr23:29471445-29470953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
32-194
               

               
Cow position:
               
chr23:7065181-7065021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
53, 7
               

               
Conread position:
               
32-308
               

               
Cow position:
               
chr23:11404596-11404302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 251
               

               
Conread position:
               
34-360
               

               
Cow position:
               
chr23:12660977-12661306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 102
               

               
Conread position:
               
37-307
               

               
Cow position:
               
chr23:4464434-4464714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr23:19948080-19947798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
39-486
               

               
Cow position:
               
chr23:1905705-1906187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 392
               

               
Conread position:
               
40-181
               

               
Cow position:
               
chr23:1922389-1922244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
41-297
               

               
Cow position:
               
chr23:39309435-39309172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
41-322
               

               
Cow position:
               
chr23:20752692-20752981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
42-240
               

               
Cow position:
               
chr23:22660887-22660694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 123
               

               
Conread position:
               
42-330
               

               
Cow position:
               
chr23:28059532-28059833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
44-210
               

               
Cow position:
               
chr23:7360619-7360789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
44-245
               

               
Cow position:
               
chr23:26462167-26461959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 141
               

               
Conread position:
               
44-337
               

               
Cow position:
               
chr23:21624014-21623711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 277
               

               
Conread position:
               
44-409
               

               
Cow position:
               
chr23:10085498-10085119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 181
               

               
Conread position:
               
47-209
               

               
Cow position:
               
chr23:4819070-4819236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
47-240
               

               
Cow position:
               
chr23:39780297-39780494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
38, 170
               

               
Conread position:
               
47-245
               

               
Cow position:
               
chr23:4472427-4472228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 89
               

               
Conread position:
               
48-348
               

               
Cow position:
               
chr23:25192864-25193173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 246
               

               
Conread position:
               
48-412
               

               
Cow position:
               
chr23:2316495-2316856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
37, 7
               

               
Conread position:
               
49-199
               

               
Cow position:
               
chr23:13674225-13674076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
50-264
               

               
Cow position:
               
chr23:1610530-1610764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
51-197
               

               
Cow position:
               
chr23:36172235-36172387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 144
               

               
Conread position:
               
51-308
               

               
Cow position:
               
chr23:12090448-12090180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
51-330
               

               
Cow position:
               
chr23:6568985-6569276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
51-371
               

               
Cow position:
               
chr23:587085-587418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
52-219
               

               
Cow position:
               
chr23:4903271-4903440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
52-256
               

               
Cow position:
               
chr23:7937846-7937643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 152
               

               
Conread position:
               
52-421
               

               
Cow position:
               
chr23:16563533-16563916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 19
               

               
Conread position:
               
55-299
               

               
Cow position:
               
chr23:29329785-29330047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 6
               

               
Conread position:
               
56-304
               

               
Cow position:
               
chr23:17891201-17890943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 185
               

               
Conread position:
               
56-330
               

               
Cow position:
               
chr23:3449952-3449666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
56-561
               

               
Cow position:
               
chr23:3247285-3247801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 134
               

               
Conread position:
               
57-256
               

               
Cow position:
               
chr23:35363072-35362872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
58-458
               

               
Cow position:
               
chr23:29459398-29458984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 209
               

               
Conread position:
               
59-229
               

               
Cow position:
               
chr23:20605584-20605400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
59-348
               

               
Cow position:
               
chr23:9192853-9193147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 7
               

               
Conread position:
               
61-562
               

               
Cow position:
               
chr23:1883092-1883606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 236
               

               
Conread position:
               
62-330
               

               
Cow position:
               
chr23:19316184-19315904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
62-542
               

               
Cow position:
               
chr23:1428517-1429016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
63-344
               

               
Cow position:
               
chr23:13600518-13600225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 281
               

               
Conread position:
               
64-252
               

               
Cow position:
               
chr23:35366396-35366202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
27, 185
               

               
Conread position:
               
69-253
               

               
Cow position:
               
chr23:1545928-1546113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
69-542
               

               
Cow position:
               
chr23:29626121-29626617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 425
               

               
Conread position:
               
71-297
               

               
Cow position:
               
chr23:5143891-5143653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
73-330
               

               
Cow position:
               
chr23:4544414-4544145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
73-343
               

               
Cow position:
               
chr23:1409672-1409391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 217
               

               
Conread position:
               
73-461
               

               
Cow position:
               
chr23:1690503-1690891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
74-473
               

               
Cow position:
               
chr23:20388920-20388526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
115, 23
               

               
Conread position:
               
76-415
               

               
Cow position:
               
chr23:3262782-3262426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
50, 100
               

               
Conread position:
               
77-267
               

               
Cow position:
               
chr23:29478684-29478491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
77-488
               

               
Cow position:
               
chr23:38208428-38208869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
16, 35
               

               
Conread position:
               
78-348
               

               
Cow position:
               
chr23:22396722-22396453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 40
               

               
Conread position:
               
80-348
               

               
Cow position:
               
chr23:3786014-3785739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
83-266
               

               
Cow position:
               
chr23:8918129-8917940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
83-539
               

               
Cow position:
               
chr23:4972510-4972953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
87, 38
               

               
Conread position:
               
84-266
               

               
Cow position:
               
chr23:24895158-24894967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
84-325
               

               
Cow position:
               
chr23:17461966-17462195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 101
               

               
Conread position:
               
84-331
               

               
Cow position:
               
chr23:1605404-1605655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
84-391
               

               
Cow position:
               
chr23:3918373-3918051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
46, 295
               

               
Conread position:
               
84-559
               

               
Cow position:
               
chr23:31601733-31601240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 353
               

               
Conread position:
               
86-431
               

               
Cow position:
               
chr23:36309154-36309508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 110
               

               
Conread position:
               
87-308
               

               
Cow position:
               
chr23:10824798-10825027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
88-348
               

               
Cow position:
               
chr23:33532864-33533132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 253
               

               
Conread position:
               
89-559
               

               
Cow position:
               
chr23:186901-187387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 350
               

               
Conread position:
               
92-322
               

               
Cow position:
               
chr23:19538261-19538029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
35, 158
               

               
Conread position:
               
93-210
               

               
Cow position:
               
chr23:34612050-34611935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
93-234
               

               
Cow position:
               
chr23:6683467-6683611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-239
               

               
Cow position:
               
chr23:29742118-29742273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
93-245
               

               
Cow position:
               
chr23:11209743-11209901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 141
               

               
Conread position:
               
93-295
               

               
Cow position:
               
chr23:38414223-38414022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
93-311
               

               
Cow position:
               
chr23:14662262-14662048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
37, 150
               

               
Conread position:
               
93-337
               

               
Cow position:
               
chr23:11380526-11380271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 247
               

               
Conread position:
               
93-338
               

               
Cow position:
               
chr23:4338872-4338630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
93-362
               

               
Cow position:
               
chr23:22588536-22588257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
93-444
               

               
Cow position:
               
chr23:17404586-17404939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
230, 87
               

               
Conread position:
               
93-458
               

               
Cow position:
               
chr23:9652733-9652372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 100
               

               
Conread position:
               
93-481
               

               
Cow position:
               
chr23:39775465-39775860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
93-542
               

               
Cow position:
               
chr23:4968785-4968340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
93-557
               

               
Cow position:
               
chr23:3967813-3967347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
93-559
               

               
Cow position:
               
chr23:16881423-16880962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
93-561
               

               
Cow position:
               
chr23:26795170-26794702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 118
               

               
Conread position:
               
94-209
               

               
Cow position:
               
chr23:14580758-14580642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
94-308
               

               
Cow position:
               
chr23:4005429-4005205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
94-315
               

               
Cow position:
               
chr23:21343511-21343290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
107, 31
               

               
Conread position:
               
94-330
               

               
Cow position:
               
chr23:15037115-15037360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
94-451
               

               
Cow position:
               
chr23:8063288-8063651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
94-458
               

               
Cow position:
               
chr23:29346024-29345654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 176
               

               
Conread position:
               
94-559
               

               
Cow position:
               
chr23:29242679-29243143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
22, 210
               

               
Conread position:
               
95-330
               

               
Cow position:
               
chr23:25288545-25288788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
95-547
               

               
Cow position:
               
chr23:26948926-26949397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 383
               

               
Conread position:
               
95-556
               

               
Cow position:
               
chr23:16583173-16582701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
96-220
               

               
Cow position:
               
chr23:28945212-28945336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
96-227
               

               
Cow position:
               
chr23:769854-769714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
96-240
               

               
Cow position:
               
chr23:39899129-39899272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
96-250
               

               
Cow position:
               
chr23:20025909-20026065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
96-319
               

               
Cow position:
               
chr23:12408774-12408544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
96-328
               

               
Cow position:
               
chr23:36199030-36199267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 147
               

               
Conread position:
               
96-351
               

               
Cow position:
               
chr23:20781559-20781821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 158
               

               
Conread position:
               
96-380
               

               
Cow position:
               
chr23:16664813-16664535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
31, 80
               

               
Conread position:
               
96-435
               

               
Cow position:
               
chr23:25358468-25358816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
96-458
               

               
Cow position:
               
chr23:3394752-3394381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
34, 72
               

               
Conread position:
               
96-476
               

               
Cow position:
               
chr23:5539919-5540281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
6, 25
               

               
Conread position:
               
96-537
               

               
Cow position:
               
chr23:21445862-21446314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
96-543
               

               
Cow position:
               
chr23:20195181-20194738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 287
               

               
Conread position:
               
96-550
               

               
Cow position:
               
chr23:13555691-13555223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
96-563
               

               
Cow position:
               
chr23:8293238-8293722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
34, 143
               

               
Conread position:
               
97-210
               

               
Cow position:
               
chr23:3434210-3434097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
97-542
               

               
Cow position:
               
chr23:5617317-5617766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
97-554
               

               
Cow position:
               
chr23:21452995-21452529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 378
               

               
Conread position:
               
99-473
               

               
Cow position:
               
chr23:29034053-29034442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 301
               

               
Conread position:
               
99-542
               

               
Cow position:
               
chr23:33711512-33711953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
226, 26
               

               
Conread position:
               
100-308
               

               
Cow position:
               
chr23:13648303-13648086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
100-563
               

               
Cow position:
               
chr23:15287393-15286935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 189
               

               
Conread position:
               
101-330
               

               
Cow position:
               
chr23:18625308-18625545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
101-387
               

               
Cow position:
               
chr23:1991685-1991396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
101-400
               

               
Cow position:
               
chr23:20057125-20056812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
32, 302
               

               
Conread position:
               
101-462
               

               
Cow position:
               
chr23:6172920-6172559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 163
               

               
Conread position:
               
102-318
               

               
Cow position:
               
chr23:2259855-2259632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
5, 31
               

               
Conread position:
               
102-385
               

               
Cow position:
               
chr23:1803537-1803826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
103-297
               

               
Cow position:
               
chr23:4740735-4740526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
103-556
               

               
Cow position:
               
chr23:6244843-6244398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
104-199
               

               
Cow position:
               
chr23:24562124-24562028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
104-210
               

               
Cow position:
               
chr23:5744842-5744950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
104-257
               

               
Cow position:
               
chr23:39302460-39302621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
104-318
               

               
Cow position:
               
chr23:23884395-23884184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 101
               

               
Conread position:
               
104-337
               

               
Cow position:
               
chr23:38854989-38854753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 50
               

               
Conread position:
               
104-548
               

               
Cow position:
               
chr23:26632545-26632997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 335
               

               
Conread position:
               
104-557
               

               
Cow position:
               
chr23:1878126-1877691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
104-559
               

               
Cow position:
               
chr23:11315272-11314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 91
               

               
Conread position:
               
105-310
               

               
Cow position:
               
chr23:5395679-5395474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 154
               

               
Conread position:
               
105-314
               

               
Cow position:
               
chr23:31654187-31654391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 140
               

               
Conread position:
               
105-338
               

               
Cow position:
               
chr23:6179960-6179728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
105-374
               

               
Cow position:
               
chr23:19979202-19978924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 163
               

               
Conread position:
               
105-411
               

               
Cow position:
               
chr23:41590163-41589854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
105-542
               

               
Cow position:
               
chr23:4810496-4810930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
28, 217
               

               
Conread position:
               
105-563
               

               
Cow position:
               
chr23:2282428-2281977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 60
               

               
Conread position:
               
107-360
               

               
Cow position:
               
chr23:15006604-15006866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 234
               

               
Conread position:
               
107-360
               

               
Cow position:
               
chr23:15007288-15007550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 234
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr23:33940408-33940080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
27, 141
               

               
Conread position:
               
108-395
               

               
Cow position:
               
chr23:33696026-33695722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 138
               

               
Conread position:
               
108-458
               

               
Cow position:
               
chr23:11045233-11045601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
109-542
               

               
Cow position:
               
chr23:38248650-38249076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 135
               

               
Conread position:
               
109-557
               

               
Cow position:
               
chr23:9599252-9599693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 86
               

               
Conread position:
               
110-337
               

               
Cow position:
               
chr23:670370-670601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 157
               

               
Conread position:
               
111-298
               

               
Cow position:
               
chr23:41348896-41348701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
111-488
               

               
Cow position:
               
chr23:18402534-18402150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
111-542
               

               
Cow position:
               
chr23:36726162-36725723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 157
               

               
Conread position:
               
114-284
               

               
Cow position:
               
chr23:7484835-7485007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
114-294
               

               
Cow position:
               
chr23:6767647-6767830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 7
               

               
Conread position:
               
114-320
               

               
Cow position:
               
chr23:40634394-40634611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
115-399
               

               
Cow position:
               
chr23:2055458-2055758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
117-572
               

               
Cow position:
               
chr23:1885418-1884954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 319
               

               
Conread position:
               
118-578
               

               
Cow position:
               
chr23:24704033-24704510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
15, 335
               

               
Conread position:
               
123-319
               

               
Cow position:
               
chr23:4523212-4523014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 7
               

               
Conread position:
               
126-257
               

               
Cow position:
               
chr23:10876198-10876330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
126-336
               

               
Cow position:
               
chr23:10868530-10868738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
126, 91
               

               
Conread position:
               
126-343
               

               
Cow position:
               
chr23:35254469-35254246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
55, 118
               

               
Conread position:
               
126-412
               

               
Cow position:
               
chr23:29521238-29521541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 141
               

               
Conread position:
               
126-438
               

               
Cow position:
               
chr23:6367374-6367708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
79, 122
               

               
Conread position:
               
126-458
               

               
Cow position:
               
chr23:40891130-40891477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
87, 105
               

               
Conread position:
               
126-476
               

               
Cow position:
               
chr23:5706769-5707124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 141
               

               
Conread position:
               
126-487
               

               
Cow position:
               
chr23:33717775-33717401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
86, 273
               

               
Conread position:
               
126-542
               

               
Cow position:
               
chr23:15742868-15743282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 56
               

               
Conread position:
               
126-563
               

               
Cow position:
               
chr23:4499367-4498917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
127-557
               

               
Cow position:
               
chr23:10416653-10416222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
128-415
               

               
Cow position:
               
chr23:12050136-12050428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 145
               

               
Conread position:
               
130-541
               

               
Cow position:
               
chr23:5451098-5451512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
132-458
               

               
Cow position:
               
chr23:27544607-27544943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
183, 80
               

               
Conread position:
               
133-556
               

               
Cow position:
               
chr23:5723319-5723735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 274
               

               
Conread position:
               
134-321
               

               
Cow position:
               
chr23:25189118-25189312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
135-487
               

               
Cow position:
               
chr23:25378433-25378786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
138-344
               

               
Cow position:
               
chr23:2570536-2570325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 11
               

               
Conread position:
               
138-400
               

               
Cow position:
               
chr23:1489837-1490095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
138-542
               

               
Cow position:
               
chr23:4504608-4505003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
139-321
               

               
Cow position:
               
chr23:1068531-1068347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
59, 174
               

               
Conread position:
               
139-557
               

               
Cow position:
               
chr23:2502067-2501651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 57
               

               
Conread position:
               
143-451
               

               
Cow position:
               
chr23:2457248-2457550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
143-464
               

               
Cow position:
               
chr23:18902265-18901933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
71, 265
               

               
Conread position:
               
144-528
               

               
Cow position:
               
chr23:16631052-16631449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
145-322
               

               
Cow position:
               
chr23:31739646-31739828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
145-451
               

               
Cow position:
               
chr23:21764705-21765027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 286
               

               
Conread position:
               
145-477
               

               
Cow position:
               
chr23:18296595-18296939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
53, 324
               

               
Conread position:
               
145-565
               

               
Cow position:
               
chr23:40789773-40790178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
170, 66
               

               
Conread position:
               
146-298
               

               
Cow position:
               
chr23:22399190-22399347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
147-431
               

               
Cow position:
               
chr23:23409536-23409820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 51
               

               
Conread position:
               
150-330
               

               
Cow position:
               
chr23:22674646-22674467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
90, 48
               

               
Conread position:
               
150-559
               

               
Cow position:
               
chr23:1776838-1776445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
41, 139
               

               
Conread position:
               
152-412
               

               
Cow position:
               
chr23:3191329-3191056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
152-557
               

               
Cow position:
               
chr23:4646308-4646713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 215
               

               
Conread position:
               
152-563
               

               
Cow position:
               
chr23:24930278-24929855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
46, 96
               

               
Conread position:
               
154-355
               

               
Cow position:
               
chr23:30585865-30585662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
60, 89
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr23:19227482-19227741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 165
               

               
Conread position:
               
157-542
               

               
Cow position:
               
chr23:36017942-36018356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 297
               

               
Conread position:
               
157-543
               

               
Cow position:
               
chr23:40443665-40444048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
55, 116
               

               
Conread position:
               
159-421
               

               
Cow position:
               
chr23:30999377-30999642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 168
               

               
Conread position:
               
160-338
               

               
Cow position:
               
chr23:38973649-38973829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
161-539
               

               
Cow position:
               
chr23:1585585-1585211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
41, 131
               

               
Conread position:
               
161-561
               

               
Cow position:
               
chr23:5426231-5426647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 305
               

               
Conread position:
               
162-542
               

               
Cow position:
               
chr23:8923408-8923790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 109
               

               
Conread position:
               
163-431
               

               
Cow position:
               
chr23:19371265-19370987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
169-473
               

               
Cow position:
               
chr23:2488173-2487863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
177-554
               

               
Cow position:
               
chr23:3282295-3281906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
178-488
               

               
Cow position:
               
chr23:4104226-4104538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
178-542
               

               
Cow position:
               
chr23:12334032-12334413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
179-458
               

               
Cow position:
               
chr23:34611644-34611376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
197-563
               

               
Cow position:
               
chr23:16744389-16744753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 141
               

               
Conread position:
               
198-458
               

               
Cow position:
               
chr23:26050879-26051153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
200-451
               

               
Cow position:
               
chr23:7360962-7361215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
201, 123
               

               
Conread position:
               
201-461
               

               
Cow position:
               
chr23:19774620-19774886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 225
               

               
Conread position:
               
205-444
               

               
Cow position:
               
chr23:35938191-35938446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
205-484
               

               
Cow position:
               
chr23:21502787-21502492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 70
               

               
Conread position:
               
205-561
               

               
Cow position:
               
chr23:5436794-5436428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
212-556
               

               
Cow position:
               
chr23:3409047-3408680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 55
               

               
Conread position:
               
212-563
               

               
Cow position:
               
chr23:12363761-12363407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 253
               

               
Conread position:
               
217-538
               

               
Cow position:
               
chr23:30950822-30951149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
217-542
               

               
Cow position:
               
chr23:5437136-5436810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
227-560
               

               
Cow position:
               
chr23:3890694-3890361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
19, 174
               

               
Conread position:
               
231-451
               

               
Cow position:
               
chr23:1438173-1438400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
231-551
               

               
Cow position:
               
chr23:5795354-5795677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
84, 149
               

               
Conread position:
               
245-542
               

               
Cow position:
               
chr23:1222349-1222050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
73, 196
               

               
Conread position:
               
248-557
               

               
Cow position:
               
chr23:11212399-11212710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
75, 218
               

               
Conread position:
               
251-542
               

               
Cow position:
               
chr23:24685148-24685431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
69, 200
               

               
Conread position:
               
252-542
               

               
Cow position:
               
chr23:10497606-10497887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
260-557
               

               
Cow position:
               
chr23:3223531-3223236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
237, 64
               

               
Conread position:
               
268-535
               

               
Cow position:
               
chr23:17486913-17486643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
50, 199
               

               
Conread position:
               
270-563
               

               
Cow position:
               
chr23:14523899-14524209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 202
               

               
Conread position:
               
282-569
               

               
Cow position:
               
chr23:5881591-5881298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 183
               

               
Conread position:
               
284-561
               

               
Cow position:
               
chr23:24966537-24966248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 184
               

               
Conread position:
               
287-550
               

               
Cow position:
               
chr23:22586821-22587078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
309-557
               

               
Cow position:
               
chr23:1760880-1760627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
314-563
               

               
Cow position:
               
chr23:40995142-40995375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
316-568
               

               
Cow position:
               
chr23:35965119-35965370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
325-558
               

               
Cow position:
               
chr23:20093262-20093036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
326-542
               

               
Cow position:
               
chr23:40637239-40637455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
329-542
               

               
Cow position:
               
chr23:22238838-22238629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
329-550
               

               
Cow position:
               
chr23:5449689-5449919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
330-508
               

               
Cow position:
               
chr23:5785829-5786001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 125
               

               
Conread position:
               
330-564
               

               
Cow position:
               
chr23:17597411-17597634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 105
               

               
Conread position:
               
331-561
               

               
Cow position:
               
chr23:25990451-25990228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
333-559
               

               
Cow position:
               
chr23:1194504-1194287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 115
               

               
Conread position:
               
333-561
               

               
Cow position:
               
chr23:1652989-1653215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
336-557
               

               
Cow position:
               
chr23:4090418-4090627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 50
               

               
Conread position:
               
341-563
               

               
Cow position:
               
chr23:27848992-27849204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
352-563
               

               
Cow position:
               
chr23:24718795-24718591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
49, 106
               
Show alignments to all cow chromosomes.