Cow genome map

Conread name: Ss1.1-Pig4-TMW8003H20.3

Conread position: 1-96
Cow position: chrX:25816591-25816496 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-112
Cow position: chrX:1823726-1823840 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 1-112
Cow position: chrX:12671823-12671709 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 1-112
Cow position: chrX:13266160-13266046 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-112
Cow position: chrX:37572828-37572942 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 1-114
Cow position: chrX:4750709-4750599 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-120
Cow position: chrX:158164-158048 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 1-131
Cow position: chrX:38852823-38852953 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 112
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 1-136
Cow position: chrX:34222413-34222551 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-140
Cow position: chrX:10256478-10256336 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 120
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 80, 57

Conread position: 1-151
Cow position: chrX:27117631-27117782 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 65

Conread position: 1-158
Cow position: chrX:38067049-38066887 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 1-160
Cow position: chrX:7573043-7573207 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 37

Conread position: 1-160
Cow position: chrX:43199101-43199263 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 1-164
Cow position: chrX:42221904-42221741 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 139
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 86, 127

Conread position: 1-164
Cow position: chrX:47965321-47965153 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 1-174
Cow position: chrX:44983625-44983446 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 126
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 1-180
Cow position: chrX:14008989-14008805 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 1-197
Cow position: chrX:22325740-22325941 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 17

Conread position: 1-198
Cow position: chrX:20382867-20382679 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 78

Conread position: 1-198
Cow position: chrX:27450366-27450155 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 176

Conread position: 1-202
Cow position: chrX:29723115-29723318 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 178

Conread position: 1-207
Cow position: chrX:21862006-21861794 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 29

Conread position: 1-209
Cow position: chrX:501915-501710 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 20

Conread position: 1-209
Cow position: chrX:12810784-12810995 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 169

Conread position: 1-209
Cow position: chrX:26754965-26754755 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 125, 0

Conread position: 1-210
Cow position: chrX:19437423-19437202 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 1-210
Cow position: chrX:20957685-20957891 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 47

Conread position: 1-212
Cow position: chrX:21344058-21344274 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 1-213
Cow position: chrX:13923102-13923299 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 88, 42

Conread position: 1-215
Cow position: chrX:12096582-12096367 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 171
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 83, 6

Conread position: 1-215
Cow position: chrX:41304075-41303864 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 148
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 79

Conread position: 1-220
Cow position: chrX:6659039-6659261 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 34, 46

Conread position: 1-220
Cow position: chrX:22115618-22115393 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 131

Conread position: 1-228
Cow position: chrX:41433755-41433525 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 80, 8

Conread position: 1-236
Cow position: chrX:37299256-37299506 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 44, 0

Conread position: 1-237
Cow position: chrX:32871122-32870876 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 160

Conread position: 1-237
Cow position: chrX:43218056-43218297 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 195

Conread position: 1-238
Cow position: chrX:18293598-18293838 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 32, 85

Conread position: 1-239
Cow position: chrX:37544612-37544852 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 162
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 87, 205

Conread position: 1-240
Cow position: chrX:6906152-6905905 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 165
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 127

Conread position: 1-240
Cow position: chrX:7381988-7382233 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 46

Conread position: 1-240
Cow position: chrX:8661425-8661672 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 132

Conread position: 1-240
Cow position: chrX:10437987-10437753 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 56, 84

Conread position: 1-240
Cow position: chrX:24886827-24886597 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 51

Conread position: 1-240
Cow position: chrX:25283476-25283240 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 83

Conread position: 1-240
Cow position: chrX:34009414-34009660 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 90, 144

Conread position: 1-240
Cow position: chrX:35633089-35632842 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 1-240
Cow position: chrX:40142530-40142287 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 200, 150

Conread position: 1-240
Cow position: chrX:45043222-45043472 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 1-240
Cow position: chrX:46448164-46447918 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 73

Conread position: 1-244
Cow position: chrX:9346809-9347058 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 130, 79

Conread position: 1-245
Cow position: chrX:40365131-40364875 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 58

Conread position: 1-250
Cow position: chrX:38577197-38577447 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 88, 104

Conread position: 1-252
Cow position: chrX:10916418-10916671 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 183

Conread position: 1-252
Cow position: chrX:13058228-13058506 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 1-253
Cow position: chrX:3161352-3161090 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 0

Conread position: 1-254
Cow position: chrX:21795160-21795420 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 0

Conread position: 1-254
Cow position: chrX:22873061-22873328 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 1-256
Cow position: chrX:20504431-20504682 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 39

Conread position: 1-256
Cow position: chrX:20976396-20976148 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 51, 124

Conread position: 1-268
Cow position: chrX:24482707-24482430 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 1-268
Cow position: chrX:32188695-32188420 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 167

Conread position: 1-275
Cow position: chrX:39698990-39699269 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 248

Conread position: 1-278
Cow position: chrX:32978593-32978309 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 179

Conread position: 1-285
Cow position: chrX:2524066-2523770 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 262

Conread position: 1-286
Cow position: chrX:126455-126746 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 248

Conread position: 1-289
Cow position: chrX:35937405-35937121 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 204, 124

Conread position: 1-292
Cow position: chrX:11581601-11581907 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 12

Conread position: 1-294
Cow position: chrX:4123499-4123802 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 202

Conread position: 1-294
Cow position: chrX:47170504-47170811 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 1-297
Cow position: chrX:28111160-28111474 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 218
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 18

Conread position: 1-300
Cow position: chrX:44731264-44731568 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 90

Conread position: 1-301
Cow position: chrX:31260967-31260656 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 95, 269

Conread position: 1-301
Cow position: chrX:32747322-32747628 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 240

Conread position: 1-307
Cow position: chrX:1978160-1978488 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 234
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 180

Conread position: 1-308
Cow position: chrX:9096331-9096648 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 1-308
Cow position: chrX:29841505-29841186 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 1-308
Cow position: chrX:36250198-36249883 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 1-309
Cow position: chrX:48287776-48287470 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 149

Conread position: 1-310
Cow position: chrX:160368-160052 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 133

Conread position: 1-310
Cow position: chrX:24200862-24201167 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 200, 105

Conread position: 1-310
Cow position: chrX:39546309-39545996 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 88, 132

Conread position: 1-314
Cow position: chrX:32743202-32743519 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 204

Conread position: 1-319
Cow position: chrX:28105590-28105909 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 88, 54

Conread position: 1-319
Cow position: chrX:34754528-34754200 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 297

Conread position: 1-321
Cow position: chrX:7718520-7718846 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 292

Conread position: 1-321
Cow position: chrX:12115705-12116038 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 93

Conread position: 1-321
Cow position: chrX:42994278-42994605 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 173

Conread position: 1-322
Cow position: chrX:11981785-11982129 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 83, 261

Conread position: 1-322
Cow position: chrX:17497760-17498075 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 202

Conread position: 1-322
Cow position: chrX:21665927-21665601 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 73

Conread position: 1-322
Cow position: chrX:25419496-25419165 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 274

Conread position: 1-322
Cow position: chrX:28513736-28514069 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 224
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 1-322
Cow position: chrX:28787035-28787347 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 90, 16

Conread position: 1-322
Cow position: chrX:38936363-38936689 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 254

Conread position: 1-326
Cow position: chrX:19019428-19019107 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 95

Conread position: 1-328
Cow position: chrX:45113300-45113619 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 92

Conread position: 1-329
Cow position: chrX:41403625-41403979 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 1-329
Cow position: chrX:41410173-41410527 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 88, 0

Conread position: 1-330
Cow position: chrX:11806352-11806013 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 51

Conread position: 1-330
Cow position: chrX:14908681-14909019 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 237
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 90, 38

Conread position: 1-330
Cow position: chrX:20945232-20945565 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 83, 127

Conread position: 1-331
Cow position: chrX:1055729-1055392 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 205

Conread position: 1-331
Cow position: chrX:3154586-3154244 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 231
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 42, 298

Conread position: 1-331
Cow position: chrX:14819376-14819720 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 243
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 88, 321

Conread position: 1-331
Cow position: chrX:20582694-20583021 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 223

Conread position: 1-331
Cow position: chrX:42462084-42461742 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 0

Conread position: 1-335
Cow position: chrX:27442888-27442553 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 154

Conread position: 1-336
Cow position: chrX:18999562-18999893 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 126

Conread position: 1-336
Cow position: chrX:35803478-35803825 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 275

Conread position: 1-339
Cow position: chrX:3653429-3653769 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 84, 28

Conread position: 1-339
Cow position: chrX:33855576-33855224 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 53

Conread position: 1-346
Cow position: chrX:16790159-16789837 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 31, 75

Conread position: 1-349
Cow position: chrX:39700882-39701245 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 100, 274

Conread position: 1-354
Cow position: chrX:11674722-11675091 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 90, 271

Conread position: 1-354
Cow position: chrX:43648080-43647719 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 179

Conread position: 1-362
Cow position: chrX:40452549-40452177 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 325

Conread position: 1-365
Cow position: chrX:38667970-38667586 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 83, 250

Conread position: 1-394
Cow position: chrX:25232250-25232662 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 386

Conread position: 1-398
Cow position: chrX:29876387-29876000 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 270
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 336, 81

Conread position: 1-400
Cow position: chrX:42507980-42507569 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 0

Conread position: 1-411
Cow position: chrX:7178576-7178988 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 156

Conread position: 1-412
Cow position: chrX:45089101-45089539 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 289
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 88, 165

Conread position: 1-413
Cow position: chrX:19689879-19690309 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 76, 33

Conread position: 1-415
Cow position: chrX:28134013-28134434 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 244

Conread position: 1-415
Cow position: chrX:47481464-47481892 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 50

Conread position: 1-421
Cow position: chrX:630629-630208 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 293
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 194, 17

Conread position: 1-421
Cow position: chrX:43527166-43527610 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 1-428
Cow position: chrX:26626021-26625562 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 290

Conread position: 1-430
Cow position: chrX:35223966-35224407 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 141

Conread position: 1-431
Cow position: chrX:11082950-11082510 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 312

Conread position: 1-431
Cow position: chrX:41122736-41123171 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 191

Conread position: 1-431
Cow position: chrX:44737327-44736888 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 293
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 122

Conread position: 1-444
Cow position: chrX:917706-917243 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 133

Conread position: 1-444
Cow position: chrX:42470273-42469816 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 202

Conread position: 1-451
Cow position: chrX:30543618-30543152 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 316
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 116

Conread position: 1-451
Cow position: chrX:37232075-37232539 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 1-458
Cow position: chrX:20801441-20801908 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 1-461
Cow position: chrX:11073541-11073049 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 337
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 248

Conread position: 1-472
Cow position: chrX:11614385-11614847 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 169

Conread position: 1-481
Cow position: chrX:878705-878222 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 158

Conread position: 1-487
Cow position: chrX:11718114-11717613 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 11

Conread position: 1-487
Cow position: chrX:18695257-18694765 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 222

Conread position: 1-487
Cow position: chrX:27516197-27516688 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 203

Conread position: 1-488
Cow position: chrX:8796915-8797418 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 47

Conread position: 1-488
Cow position: chrX:34401662-34402178 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 60

Conread position: 1-489
Cow position: chrX:14599200-14599700 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 30

Conread position: 1-492
Cow position: chrX:24288249-24287763 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 341
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 211, 125

Conread position: 1-506
Cow position: chrX:35388243-35387738 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 331

Conread position: 1-506
Cow position: chrX:38227426-38226924 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 196

Conread position: 1-515
Cow position: chrX:45967826-45968336 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 344
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 93, 233

Conread position: 1-516
Cow position: chrX:34532195-34532709 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 123

Conread position: 1-517
Cow position: chrX:6413710-6414230 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 172

Conread position: 1-533
Cow position: chrX:46771308-46770754 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 305

Conread position: 1-534
Cow position: chrX:17794659-17795189 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 89

Conread position: 1-534
Cow position: chrX:31949266-31948725 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 35

Conread position: 1-539
Cow position: chrX:47343956-47344513 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 270

Conread position: 1-540
Cow position: chrX:14884298-14883742 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 1-541
Cow position: chrX:4633187-4632638 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 72

Conread position: 1-541
Cow position: chrX:10831848-10831265 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 459

Conread position: 1-541
Cow position: chrX:15596709-15597244 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 70

Conread position: 1-541
Cow position: chrX:31436144-31436685 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 202

Conread position: 1-541
Cow position: chrX:40269140-40269724 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 1-542
Cow position: chrX:2300595-2301140 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 202

Conread position: 1-542
Cow position: chrX:9252510-9251946 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 97

Conread position: 1-542
Cow position: chrX:12249465-12250032 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 185

Conread position: 1-542
Cow position: chrX:15007487-15006942 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 176

Conread position: 1-542
Cow position: chrX:15485961-15485416 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 340

Conread position: 1-542
Cow position: chrX:28632813-28632265 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 8

Conread position: 1-542
Cow position: chrX:28847212-28846675 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 204

Conread position: 1-542
Cow position: chrX:31250056-31250607 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 41

Conread position: 1-542
Cow position: chrX:34554399-34554941 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 54

Conread position: 1-542
Cow position: chrX:38218382-38218930 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 140

Conread position: 1-542
Cow position: chrX:40558012-40557441 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 192

Conread position: 1-542
Cow position: chrX:44054469-44055020 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 101

Conread position: 1-542
Cow position: chrX:44396684-44397228 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 88

Conread position: 1-542
Cow position: chrX:45501812-45502352 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 268

Conread position: 1-542
Cow position: chrX:46532856-46532273 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 475

Conread position: 1-546
Cow position: chrX:43730528-43729998 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 78

Conread position: 1-550
Cow position: chrX:34502587-34503156 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 0

Conread position: 1-551
Cow position: chrX:5017742-5017185 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 103

Conread position: 1-551
Cow position: chrX:21592950-21593517 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 337

Conread position: 1-554
Cow position: chrX:31489176-31489750 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 147

Conread position: 1-557
Cow position: chrX:4996279-4996821 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 76

Conread position: 1-557
Cow position: chrX:10866203-10865637 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 388

Conread position: 1-558
Cow position: chrX:12437571-12437050 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 28

Conread position: 1-558
Cow position: chrX:20887980-20887414 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 176

Conread position: 1-558
Cow position: chrX:40827083-40826517 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 177

Conread position: 1-559
Cow position: chrX:6543920-6544479 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 296

Conread position: 1-559
Cow position: chrX:7277592-7278140 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 115

Conread position: 1-559
Cow position: chrX:7695428-7695997 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 46

Conread position: 1-559
Cow position: chrX:22812726-22813301 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 303

Conread position: 1-559
Cow position: chrX:34441783-34441219 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 152

Conread position: 1-559
Cow position: chrX:38963775-38964334 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 125

Conread position: 1-561
Cow position: chrX:29048697-29049273 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 8

Conread position: 1-563
Cow position: chrX:3654272-3654843 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 83

Conread position: 1-563
Cow position: chrX:9651381-9650789 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 104

Conread position: 1-563
Cow position: chrX:12290401-12290958 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 59

Conread position: 1-563
Cow position: chrX:25035722-25035141 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 461

Conread position: 1-563
Cow position: chrX:27705257-27705827 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 134

Conread position: 1-563
Cow position: chrX:37072070-37072622 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 184

Conread position: 1-563
Cow position: chrX:40481207-40480609 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 31

Conread position: 1-563
Cow position: chrX:44192777-44192202 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 383
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 86, 46

Conread position: 1-564
Cow position: chrX:151565-152140 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 178

Conread position: 1-564
Cow position: chrX:43114836-43115392 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 108

Conread position: 1-565
Cow position: chrX:38094861-38094287 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 170

Conread position: 1-568
Cow position: chrX:5118819-5118255 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 166

Conread position: 1-568
Cow position: chrX:31729122-31729677 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 127

Conread position: 1-575
Cow position: chrX:34238384-34238974 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 275

Conread position: 1-575
Cow position: chrX:45430354-45429779 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 473

Conread position: 1-625
Cow position: chrX:20340227-20339592 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 187

Conread position: 2-128
Cow position: chrX:11583479-11583352 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 2-162
Cow position: chrX:8325925-8326088 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 82, 116

Conread position: 2-194
Cow position: chrX:40581657-40581852 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 82, 188

Conread position: 2-201
Cow position: chrX:26754120-26753916 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 87, 131

Conread position: 2-204
Cow position: chrX:3808071-3808282 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 86, 0

Conread position: 2-208
Cow position: chrX:28646321-28646112 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 9, 109

Conread position: 2-209
Cow position: chrX:7809338-7809125 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 183

Conread position: 2-238
Cow position: chrX:26878332-26878577 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 140

Conread position: 2-239
Cow position: chrX:10415860-10415618 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 181
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 87, 23

Conread position: 2-239
Cow position: chrX:48224521-48224276 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 0

Conread position: 2-240
Cow position: chrX:47379802-47379568 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 187

Conread position: 2-246
Cow position: chrX:29049641-29049880 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 5

Conread position: 2-253
Cow position: chrX:19771952-19771710 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 188
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 127, 92

Conread position: 2-270
Cow position: chrX:36778070-36778352 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 2-287
Cow position: chrX:20653058-20653358 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 87, 251

Conread position: 2-297
Cow position: chrX:29942816-29943123 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 206
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 2-299
Cow position: chrX:2786881-2786589 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 84, 124

Conread position: 2-330
Cow position: chrX:17271623-17271283 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 5

Conread position: 2-331
Cow position: chrX:41743578-41743915 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 0

Conread position: 2-364
Cow position: chrX:15139883-15139504 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 44

Conread position: 2-385
Cow position: chrX:34192346-34192734 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 69

Conread position: 2-385
Cow position: chrX:48243787-48243410 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 260
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 94, 178

Conread position: 2-412
Cow position: chrX:37843385-37843810 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 300

Conread position: 2-415
Cow position: chrX:23583223-23583657 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 274

Conread position: 2-431
Cow position: chrX:7571571-7572017 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 245

Conread position: 2-469
Cow position: chrX:17964850-17964372 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 92

Conread position: 2-477
Cow position: chrX:20697938-20697455 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 102

Conread position: 2-477
Cow position: chrX:24424727-24424245 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 63

Conread position: 2-485
Cow position: chrX:38007103-38006606 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 167

Conread position: 2-495
Cow position: chrX:33639632-33640153 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 53

Conread position: 2-528
Cow position: chrX:11844573-11844037 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 169

Conread position: 2-541
Cow position: chrX:1616386-1615842 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 422

Conread position: 2-542
Cow position: chrX:15147518-15146982 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 29

Conread position: 2-542
Cow position: chrX:37489383-37489946 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 213

Conread position: 2-557
Cow position: chrX:42086527-42087058 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 119

Conread position: 2-559
Cow position: chrX:15545562-15546115 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 131

Conread position: 2-559
Cow position: chrX:24317731-24318301 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 115

Conread position: 2-559
Cow position: chrX:34564965-34565520 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 122

Conread position: 2-560
Cow position: chrX:161093-161639 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 134

Conread position: 2-560
Cow position: chrX:27446356-27446918 (view UCSC Genome Browser custom track)
Alignm length: 573
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 333

Conread position: 2-563
Cow position: chrX:23564132-23563550 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 453

Conread position: 2-577
Cow position: chrX:13912744-13913328 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 252

Conread position: 2-636
Cow position: chrX:31373243-31373860 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 78

Conread position: 3-128
Cow position: chrX:12008016-12007888 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-128
Cow position: chrX:15231961-15231834 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 81, 64

Conread position: 3-128
Cow position: chrX:23341331-23341203 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-128
Cow position: chrX:28542216-28542088 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 3-128
Cow position: chrX:34006476-34006347 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 3-131
Cow position: chrX:2715288-2715419 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 3-131
Cow position: chrX:16222292-16222422 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 83, 36

Conread position: 3-131
Cow position: chrX:20954270-20954401 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 3-131
Cow position: chrX:22522165-22522034 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 3-131
Cow position: chrX:28314091-28314222 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 3-131
Cow position: chrX:39185839-39185970 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 3-131
Cow position: chrX:40224577-40224447 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 119

Conread position: 3-133
Cow position: chrX:30134822-30134687 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 3-156
Cow position: chrX:6407011-6407163 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 124

Conread position: 3-173
Cow position: chrX:45945299-45945471 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 122, 0

Conread position: 3-174
Cow position: chrX:48423601-48423777 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 3-179
Cow position: chrX:12690993-12690813 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 3-192
Cow position: chrX:16040014-16039820 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 3-198
Cow position: chrX:15341372-15341172 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 181

Conread position: 3-199
Cow position: chrX:21844300-21844504 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 3-199
Cow position: chrX:23135241-23135439 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 3-206
Cow position: chrX:24467459-24467251 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 3-207
Cow position: chrX:626378-626170 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 3-207
Cow position: chrX:15620866-15620657 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 3-207
Cow position: chrX:23316754-23316548 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 3-207
Cow position: chrX:26617255-26617047 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 81, 202

Conread position: 3-207
Cow position: chrX:28588636-28588845 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-207
Cow position: chrX:29864765-29864557 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 88, 0

Conread position: 3-207
Cow position: chrX:29877515-29877306 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 159
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 3-209
Cow position: chrX:22600750-22600540 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 3-210
Cow position: chrX:27982479-27982268 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 122

Conread position: 3-210
Cow position: chrX:32182364-32182149 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 67

Conread position: 3-210
Cow position: chrX:47368580-47368371 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 3-212
Cow position: chrX:3096089-3095890 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 51

Conread position: 3-212
Cow position: chrX:5408721-5408935 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:5892894-5893108 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:6454361-6454575 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 0

Conread position: 3-212
Cow position: chrX:6828801-6829016 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 65, 0

Conread position: 3-212
Cow position: chrX:7097124-7097337 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 94

Conread position: 3-212
Cow position: chrX:7118978-7118764 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:7677634-7677849 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:9154026-9154240 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 3-212
Cow position: chrX:9593469-9593255 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:10992284-10992498 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:11566580-11566794 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:11672447-11672661 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:14134847-14135061 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 3-212
Cow position: chrX:23452932-23452718 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:24320606-24320396 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 158
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 124, 182

Conread position: 3-212
Cow position: chrX:26506275-26506064 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 33, 82

Conread position: 3-212
Cow position: chrX:28559169-28558957 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 109

Conread position: 3-212
Cow position: chrX:30863533-30863319 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:30950194-30950408 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:32331297-32331507 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 81, 125

Conread position: 3-212
Cow position: chrX:36535069-36534855 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:37403357-37403142 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:39548996-39549210 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 0

Conread position: 3-212
Cow position: chrX:45467554-45467339 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 83, 0

Conread position: 3-215
Cow position: chrX:15718011-15717798 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 53

Conread position: 3-215
Cow position: chrX:27240402-27240620 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 157

Conread position: 3-227
Cow position: chrX:15114337-15114566 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 225

Conread position: 3-229
Cow position: chrX:3570117-3570349 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 86, 213

Conread position: 3-237
Cow position: chrX:40602630-40602867 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 132

Conread position: 3-239
Cow position: chrX:24735609-24735851 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 89, 27

Conread position: 3-240
Cow position: chrX:1518773-1518530 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 3-240
Cow position: chrX:5127589-5127827 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 78, 43

Conread position: 3-240
Cow position: chrX:37377596-37377352 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 86, 6

Conread position: 3-240
Cow position: chrX:42841387-42841137 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 85, 180

Conread position: 3-245
Cow position: chrX:21255703-21255956 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 143

Conread position: 3-250
Cow position: chrX:24280601-24280851 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 211

Conread position: 3-252
Cow position: chrX:2351728-2351986 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-252
Cow position: chrX:30052803-30052549 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 155
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 3-256
Cow position: chrX:29760365-29760630 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 0

Conread position: 3-259
Cow position: chrX:30965767-30966035 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-260
Cow position: chrX:15561149-15560879 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 81, 0

Conread position: 3-262
Cow position: chrX:13686383-13686658 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 107

Conread position: 3-262
Cow position: chrX:22811552-22811822 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 3-265
Cow position: chrX:44851757-44852034 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 31

Conread position: 3-265
Cow position: chrX:48370762-48371035 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-266
Cow position: chrX:15346303-15346028 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 3-267
Cow position: chrX:2932054-2931777 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 3-267
Cow position: chrX:24809304-24809032 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 161

Conread position: 3-268
Cow position: chrX:12179634-12179904 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 122

Conread position: 3-268
Cow position: chrX:21749792-21749527 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 81, 41

Conread position: 3-269
Cow position: chrX:19674314-19674591 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 81, 275

Conread position: 3-270
Cow position: chrX:37079873-37079601 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 0

Conread position: 3-272
Cow position: chrX:16046814-16047097 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 3-276
Cow position: chrX:16529671-16529956 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 130

Conread position: 3-276
Cow position: chrX:28518057-28517774 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 86, 42

Conread position: 3-276
Cow position: chrX:42855076-42855361 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 3-277
Cow position: chrX:22567198-22567484 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 3-280
Cow position: chrX:37852805-37853086 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 124, 78

Conread position: 3-282
Cow position: chrX:5112890-5112600 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 277

Conread position: 3-295
Cow position: chrX:24975603-24975899 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 81, 154

Conread position: 3-298
Cow position: chrX:18223079-18223385 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 0

Conread position: 3-299
Cow position: chrX:22613052-22613360 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-303
Cow position: chrX:16078335-16078637 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 86, 141

Conread position: 3-304
Cow position: chrX:6652406-6652093 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 218
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-304
Cow position: chrX:39559986-39559673 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 224
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-304
Cow position: chrX:41156977-41157290 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 86, 0

Conread position: 3-305
Cow position: chrX:47386265-47385952 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 3-307
Cow position: chrX:7444750-7445065 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-307
Cow position: chrX:26275805-26276121 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-308
Cow position: chrX:2104071-2104384 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-308
Cow position: chrX:3372187-3371875 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 83, 26

Conread position: 3-308
Cow position: chrX:3464410-3464095 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 170

Conread position: 3-308
Cow position: chrX:5280187-5279871 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 185

Conread position: 3-308
Cow position: chrX:6372847-6373164 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 3-308
Cow position: chrX:8483756-8484061 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 32

Conread position: 3-308
Cow position: chrX:8530206-8530523 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-308
Cow position: chrX:8782410-8782727 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 86, 0

Conread position: 3-308
Cow position: chrX:10528108-10527792 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 183

Conread position: 3-308
Cow position: chrX:10932338-10932655 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 0

Conread position: 3-308
Cow position: chrX:11725601-11725280 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 3-308
Cow position: chrX:11975821-11975512 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 133

Conread position: 3-308
Cow position: chrX:12466161-12466476 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 216
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 81, 180

Conread position: 3-308
Cow position: chrX:13396586-13396269 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 3-308
Cow position: chrX:14162857-14163174 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 81, 0

Conread position: 3-308
Cow position: chrX:19290438-19290741 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 132

Conread position: 3-308
Cow position: chrX:20617131-20616814 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 3-308
Cow position: chrX:21768470-21768786 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 275

Conread position: 3-308
Cow position: chrX:22821080-22821397 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 0

Conread position: 3-308
Cow position: chrX:22888324-22888642 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 0

Conread position: 3-308
Cow position: chrX:25452216-25452525 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 85, 40

Conread position: 3-308
Cow position: chrX:26974576-26974893 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-308
Cow position: chrX:27095785-27096093 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 174

Conread position: 3-308
Cow position: chrX:27627021-27627338 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-308
Cow position: chrX:28752674-28752356 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 83, 190

Conread position: 3-308
Cow position: chrX:30531364-30531045 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 24

Conread position: 3-308
Cow position: chrX:31202506-31202823 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 3-308
Cow position: chrX:31449956-31449640 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 296

Conread position: 3-308
Cow position: chrX:31978178-31977863 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 88, 36

Conread position: 3-308
Cow position: chrX:34840101-34839802 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 198, 49

Conread position: 3-308
Cow position: chrX:39292077-39291778 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 199
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 125

Conread position: 3-308
Cow position: chrX:45674512-45674826 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 49

Conread position: 3-308
Cow position: chrX:47318072-47318389 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 219
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 3-310
Cow position: chrX:17743736-17744045 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 57

Conread position: 3-310
Cow position: chrX:38967317-38967628 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 72

Conread position: 3-313
Cow position: chrX:41790771-41790462 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 225
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 88, 15

Conread position: 3-314
Cow position: chrX:36840533-36840854 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 255

Conread position: 3-318
Cow position: chrX:2499674-2499350 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 89, 0

Conread position: 3-318
Cow position: chrX:42459838-42460174 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 3-319
Cow position: chrX:12776320-12775993 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-320
Cow position: chrX:9227318-9226987 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 85, 129

Conread position: 3-322
Cow position: chrX:1331598-1331933 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 227
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 86, 0

Conread position: 3-322
Cow position: chrX:2160431-2160763 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:4622288-4621956 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:6558516-6558848 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 246

Conread position: 3-322
Cow position: chrX:8434541-8434209 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 225
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:13971561-13971229 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:14462979-14463311 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 0

Conread position: 3-322
Cow position: chrX:14598511-14598843 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:15577975-15577643 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 3-322
Cow position: chrX:18656139-18655807 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:22077993-22078325 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:24413696-24414028 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 229
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 216

Conread position: 3-322
Cow position: chrX:26229842-26229516 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 86, 114

Conread position: 3-322
Cow position: chrX:27422615-27422284 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:29903408-29903741 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:31814223-31813891 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:32010697-32011029 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:35612878-35612547 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 100

Conread position: 3-322
Cow position: chrX:39714215-39714547 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 230
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:42120969-42121301 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 83, 0

Conread position: 3-322
Cow position: chrX:42733531-42733852 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 218
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 232

Conread position: 3-322
Cow position: chrX:43511082-43511417 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 3-322
Cow position: chrX:44557745-44558077 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 3-322
Cow position: chrX:45237132-45237464 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 0

Conread position: 3-322
Cow position: chrX:46297326-46297658 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 0

Conread position: 3-322
Cow position: chrX:47608080-47608412 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-324
Cow position: chrX:23986912-23987244 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 231
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 29

Conread position: 3-326
Cow position: chrX:15091100-15090765 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 204
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 36

Conread position: 3-328
Cow position: chrX:20038552-20038214 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 233
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 0

Conread position: 3-329
Cow position: chrX:6869897-6869557 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:1947055-1946711 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 339

Conread position: 3-330
Cow position: chrX:5306265-5306604 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 3-330
Cow position: chrX:5334153-5333815 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 83, 69

Conread position: 3-330
Cow position: chrX:7311659-7311998 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 235
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:7486530-7486869 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 83, 0

Conread position: 3-330
Cow position: chrX:8591206-8591550 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 81, 245

Conread position: 3-330
Cow position: chrX:9085667-9085327 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:13091495-13091157 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 41

Conread position: 3-330
Cow position: chrX:13385073-13385413 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:14409721-14409384 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 238
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 280

Conread position: 3-330
Cow position: chrX:15259953-15259614 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 82, 0

Conread position: 3-330
Cow position: chrX:16722141-16721804 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 269

Conread position: 3-330
Cow position: chrX:17605895-17605556 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 3-330
Cow position: chrX:22557167-22557506 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:24447467-24447804 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 295

Conread position: 3-330
Cow position: chrX:27105924-27106264 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:27404279-27403941 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 54

Conread position: 3-330
Cow position: chrX:29508449-29508782 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 124, 80

Conread position: 3-330
Cow position: chrX:30196963-30197302 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 334

Conread position: 3-330
Cow position: chrX:30686930-30686588 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 174

Conread position: 3-330
Cow position: chrX:30981499-30981160 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 232
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 3-330
Cow position: chrX:34333534-34333195 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 334

Conread position: 3-330
Cow position: chrX:37764531-37764191 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 3-330
Cow position: chrX:40648332-40648651 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 182

Conread position: 3-330
Cow position: chrX:44980371-44980032 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 236
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 86, 201

Conread position: 3-331
Cow position: chrX:11461206-11460867 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 217
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 324

Conread position: 3-331
Cow position: chrX:36195758-36196098 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 3-331
Cow position: chrX:45412986-45412657 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 80

Conread position: 3-332
Cow position: chrX:16706465-16706809 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 63, 128

Conread position: 3-332
Cow position: chrX:16713863-16714203 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 235
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 125

Conread position: 3-334
Cow position: chrX:10351527-10351872 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-334
Cow position: chrX:29226142-29226484 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 83, 291

Conread position: 3-335
Cow position: chrX:6234768-6234445 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 34

Conread position: 3-336
Cow position: chrX:11358399-11358054 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 174

Conread position: 3-337
Cow position: chrX:8641454-8641797 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 83, 205

Conread position: 3-337
Cow position: chrX:23572134-23571787 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-338
Cow position: chrX:38439140-38439484 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 31

Conread position: 3-338
Cow position: chrX:41103454-41103799 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 86, 317

Conread position: 3-342
Cow position: chrX:18118806-18118455 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 239
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 81, 125

Conread position: 3-344
Cow position: chrX:2417818-2417465 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-344
Cow position: chrX:5423400-5423047 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 341

Conread position: 3-344
Cow position: chrX:5646438-5646085 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-344
Cow position: chrX:24969150-24968797 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 243
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 81, 341

Conread position: 3-344
Cow position: chrX:25276833-25276480 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 216

Conread position: 3-344
Cow position: chrX:34519392-34519745 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 3-348
Cow position: chrX:361787-361431 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:2362165-2362521 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:3078921-3078566 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 174

Conread position: 3-348
Cow position: chrX:3157284-3157640 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 83, 341

Conread position: 3-348
Cow position: chrX:5289021-5288665 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:5599312-5598956 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:5866812-5867167 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 182

Conread position: 3-348
Cow position: chrX:6196088-6195732 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:6566740-6567096 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:7509803-7510158 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 244
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 340

Conread position: 3-348
Cow position: chrX:9018637-9018281 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:10444749-10444392 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 342

Conread position: 3-348
Cow position: chrX:10495899-10496255 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:10915704-10916068 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 246
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 327

Conread position: 3-348
Cow position: chrX:10922905-10922549 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:11663844-11664200 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:11715796-11715440 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 244
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:11860576-11860220 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:12145761-12146116 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 96

Conread position: 3-348
Cow position: chrX:12458364-12458722 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 240
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 0

Conread position: 3-348
Cow position: chrX:13070935-13070580 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 83, 41

Conread position: 3-348
Cow position: chrX:13196305-13195949 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:13447936-13448292 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:15172861-15172511 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 211, 78

Conread position: 3-348
Cow position: chrX:15781247-15781603 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:16735190-16735546 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 246
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 338

Conread position: 3-348
Cow position: chrX:17995125-17995481 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:18451413-18451069 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 211

Conread position: 3-348
Cow position: chrX:19109375-19109019 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:19473495-19473138 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 342

Conread position: 3-348
Cow position: chrX:19495294-19494938 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:19774814-19774458 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:20032165-20031812 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 308

Conread position: 3-348
Cow position: chrX:20098988-20099344 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:21686286-21686636 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 130, 80

Conread position: 3-348
Cow position: chrX:22608926-22608570 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:23109428-23109779 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 65

Conread position: 3-348
Cow position: chrX:23235496-23235852 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:24509533-24509889 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:24966935-24967291 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:25289013-25288657 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 284

Conread position: 3-348
Cow position: chrX:27759373-27759729 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:28058129-28057773 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:28555769-28555413 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:30538486-30538130 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:30752440-30752796 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:30837039-30837385 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 216

Conread position: 3-348
Cow position: chrX:32039177-32038821 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:33764010-33764366 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:34095227-34095583 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:34285398-34285041 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 71, 342

Conread position: 3-348
Cow position: chrX:34413442-34413798 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:36240061-36240417 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:36479598-36479954 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:36730050-36730408 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 343

Conread position: 3-348
Cow position: chrX:36820566-36820210 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:37061125-37060769 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:37497781-37497425 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:37772768-37772411 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 342

Conread position: 3-348
Cow position: chrX:38014760-38015116 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:38442628-38442984 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:39731179-39731535 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:41488499-41488144 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 311

Conread position: 3-348
Cow position: chrX:43767871-43767515 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:44168643-44168287 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 341

Conread position: 3-348
Cow position: chrX:48165189-48165545 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-348
Cow position: chrX:48328721-48328365 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-350
Cow position: chrX:17980261-17980619 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 218
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 332

Conread position: 3-352
Cow position: chrX:29169670-29169308 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 28, 336

Conread position: 3-352
Cow position: chrX:45399832-45399467 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 88, 343

Conread position: 3-353
Cow position: chrX:21062883-21063240 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 44

Conread position: 3-359
Cow position: chrX:3649142-3648784 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 231

Conread position: 3-359
Cow position: chrX:6493398-6493766 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 101

Conread position: 3-360
Cow position: chrX:671343-670974 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 334

Conread position: 3-360
Cow position: chrX:1781571-1781941 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 342

Conread position: 3-360
Cow position: chrX:2559294-2558929 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 337

Conread position: 3-360
Cow position: chrX:2664675-2665044 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:2945203-2944833 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 8, 335

Conread position: 3-360
Cow position: chrX:3387772-3388141 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:4343415-4343784 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 334

Conread position: 3-360
Cow position: chrX:5123695-5123326 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 323

Conread position: 3-360
Cow position: chrX:5406724-5407090 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 250
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 133

Conread position: 3-360
Cow position: chrX:5739547-5739178 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 334

Conread position: 3-360
Cow position: chrX:9128722-9129091 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:9168948-9168581 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 249
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 83, 322

Conread position: 3-360
Cow position: chrX:10428206-10428574 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 86, 73

Conread position: 3-360
Cow position: chrX:12001481-12001112 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:14122085-14121717 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 83, 22

Conread position: 3-360
Cow position: chrX:14134141-14134510 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 334

Conread position: 3-360
Cow position: chrX:14801152-14800783 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 334

Conread position: 3-360
Cow position: chrX:14846408-14846039 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 337

Conread position: 3-360
Cow position: chrX:15438983-15438618 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 83, 125

Conread position: 3-360
Cow position: chrX:15504957-15505326 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:16359343-16358980 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 126, 80

Conread position: 3-360
Cow position: chrX:16465966-16466336 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 338

Conread position: 3-360
Cow position: chrX:17055235-17055604 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 83, 262

Conread position: 3-360
Cow position: chrX:22772321-22772690 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 323

Conread position: 3-360
Cow position: chrX:23047446-23047813 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 336

Conread position: 3-360
Cow position: chrX:23139979-23140344 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 65

Conread position: 3-360
Cow position: chrX:24758031-24757662 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 341

Conread position: 3-360
Cow position: chrX:24769194-24768829 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 127

Conread position: 3-360
Cow position: chrX:30899722-30899352 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 342

Conread position: 3-360
Cow position: chrX:30940847-30941218 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 253
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 0

Conread position: 3-360
Cow position: chrX:31605350-31605719 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:34761732-34762101 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 81, 261

Conread position: 3-360
Cow position: chrX:35533517-35533886 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:37816254-37816623 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 337

Conread position: 3-360
Cow position: chrX:37958163-37958532 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 341

Conread position: 3-360
Cow position: chrX:38230601-38230232 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 334

Conread position: 3-360
Cow position: chrX:38331048-38331401 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 81, 200

Conread position: 3-360
Cow position: chrX:39174547-39174188 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 86, 280

Conread position: 3-360
Cow position: chrX:40591352-40591711 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 216

Conread position: 3-360
Cow position: chrX:42591391-42591762 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 83, 336

Conread position: 3-360
Cow position: chrX:45263402-45263034 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 81, 180

Conread position: 3-360
Cow position: chrX:46579189-46578820 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 334

Conread position: 3-361
Cow position: chrX:3417473-3417104 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 81, 333

Conread position: 3-361
Cow position: chrX:27977163-27976793 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 3-361
Cow position: chrX:45786796-45787164 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 86, 125

Conread position: 3-362
Cow position: chrX:7742791-7742421 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 81, 324

Conread position: 3-368
Cow position: chrX:32128328-32127946 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 200

Conread position: 3-369
Cow position: chrX:2274583-2274961 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 334

Conread position: 3-369
Cow position: chrX:7755567-7755945 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 81, 334

Conread position: 3-369
Cow position: chrX:11145672-11145294 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 255
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 83, 334

Conread position: 3-369
Cow position: chrX:44387656-44388029 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 134, 80

Conread position: 3-369
Cow position: chrX:45903844-45904222 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 334

Conread position: 3-373
Cow position: chrX:17783165-17783547 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 260
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 83, 323

Conread position: 3-385
Cow position: chrX:13785712-13785296 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 212

Conread position: 3-392
Cow position: chrX:39954872-39954478 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 81, 0

Conread position: 3-398
Cow position: chrX:19022643-19022228 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 280
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 83, 411

Conread position: 3-400
Cow position: chrX:23299620-23300037 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 86, 0

Conread position: 3-401
Cow position: chrX:30822250-30822668 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 281
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 81, 411

Conread position: 3-411
Cow position: chrX:32171216-32170797 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 183

Conread position: 3-412
Cow position: chrX:14407784-14407355 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 289
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 86, 130

Conread position: 3-458
Cow position: chrX:15329319-15329781 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 248

Conread position: 3-467
Cow position: chrX:41192356-41192850 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 114

Conread position: 3-506
Cow position: chrX:4044192-4043675 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 250

Conread position: 3-515
Cow position: chrX:28866323-28865814 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 172

Conread position: 3-521
Cow position: chrX:13648118-13647588 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 190

Conread position: 3-537
Cow position: chrX:12309722-12309173 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 234

Conread position: 3-555
Cow position: chrX:8899690-8900248 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 317

Conread position: 3-558
Cow position: chrX:31443154-31442604 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 52

Conread position: 3-560
Cow position: chrX:38072101-38071518 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 81

Conread position: 3-561
Cow position: chrX:34376618-34377177 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 145

Conread position: 3-563
Cow position: chrX:5871979-5872572 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 302

Conread position: 3-563
Cow position: chrX:11655744-11656318 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 338

Conread position: 3-563
Cow position: chrX:30338253-30337718 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 3-563
Cow position: chrX:41879264-41878697 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 54

Conread position: 3-564
Cow position: chrX:13177791-13177242 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 64

Conread position: 4-128
Cow position: chrX:42530240-42530117 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 4-178
Cow position: chrX:24788049-24787875 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 85, 113

Conread position: 4-259
Cow position: chrX:12360556-12360823 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 0

Conread position: 4-274
Cow position: chrX:30139117-30138842 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 159
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 4-308
Cow position: chrX:28024930-28025244 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 214
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 85, 179

Conread position: 4-320
Cow position: chrX:3405688-3405371 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 190

Conread position: 4-330
Cow position: chrX:43983843-43984178 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 230
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 85, 8

Conread position: 4-336
Cow position: chrX:10306340-10306679 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 296

Conread position: 4-354
Cow position: chrX:33803348-33802978 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 85, 47

Conread position: 4-416
Cow position: chrX:26441113-26440688 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 408

Conread position: 4-561
Cow position: chrX:11820026-11820606 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 385
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 27

Conread position: 5-210
Cow position: chrX:36678002-36677792 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 70

Conread position: 5-244
Cow position: chrX:23218746-23218985 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 179

Conread position: 5-244
Cow position: chrX:41049780-41050033 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 5, 166

Conread position: 5-253
Cow position: chrX:18990132-18989873 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 83, 0

Conread position: 5-301
Cow position: chrX:5676030-5675731 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 83, 108

Conread position: 5-304
Cow position: chrX:30454954-30454643 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 0

Conread position: 5-420
Cow position: chrX:11561810-11562247 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 288
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 6, 341

Conread position: 5-431
Cow position: chrX:47967267-47967719 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 5-432
Cow position: chrX:29289244-29289691 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 267

Conread position: 6-197
Cow position: chrX:13363810-13363613 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 117

Conread position: 6-206
Cow position: chrX:41305960-41305759 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 78, 115

Conread position: 6-582
Cow position: chrX:34454343-34454913 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 37

Conread position: 7-171
Cow position: chrX:2079572-2079397 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 7-240
Cow position: chrX:9970600-9970832 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 207, 89

Conread position: 7-240
Cow position: chrX:28516164-28515941 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 85, 0

Conread position: 7-310
Cow position: chrX:3396099-3395787 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 230

Conread position: 7-320
Cow position: chrX:25848585-25848902 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 233
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 78, 129

Conread position: 7-323
Cow position: chrX:42587759-42587434 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 223
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 82, 170

Conread position: 7-412
Cow position: chrX:15120219-15119802 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 272
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 121

Conread position: 8-206
Cow position: chrX:17969178-17968975 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 176

Conread position: 8-234
Cow position: chrX:22329899-22329665 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 76, 48

Conread position: 8-241
Cow position: chrX:3207891-3207652 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 176

Conread position: 8-413
Cow position: chrX:47144746-47145179 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 263

Conread position: 8-431
Cow position: chrX:7508798-7509251 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 18

Conread position: 8-444
Cow position: chrX:47054845-47054400 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 310
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 122, 83

Conread position: 9-131
Cow position: chrX:19399450-19399575 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 9-131
Cow position: chrX:22521549-22521424 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 9-132
Cow position: chrX:34006985-34007111 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 9-142
Cow position: chrX:37905691-37905826 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 126

Conread position: 9-175
Cow position: chrX:40321299-40321472 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 9-184
Cow position: chrX:525348-525528 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 75, 0

Conread position: 9-192
Cow position: chrX:32214799-32214611 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 76, 0

Conread position: 9-196
Cow position: chrX:27749337-27749147 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 172

Conread position: 9-206
Cow position: chrX:4664945-4664743 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 9-208
Cow position: chrX:21495430-21495634 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 9-210
Cow position: chrX:10718182-10718387 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 9-210
Cow position: chrX:18896744-18896542 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 74

Conread position: 9-210
Cow position: chrX:27616510-27616712 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 120, 85

Conread position: 9-210
Cow position: chrX:30163566-30163362 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 159

Conread position: 9-212
Cow position: chrX:42141955-42141759 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 77, 124

Conread position: 9-213
Cow position: chrX:19320262-19320475 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 80, 173

Conread position: 9-214
Cow position: chrX:26289011-26288802 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 172

Conread position: 9-215
Cow position: chrX:508484-508273 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 75, 177

Conread position: 9-215
Cow position: chrX:9898670-9898459 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 208

Conread position: 9-215
Cow position: chrX:11904653-11904441 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 78, 0

Conread position: 9-215
Cow position: chrX:29010405-29010614 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 73, 152

Conread position: 9-215
Cow position: chrX:31777765-31777552 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 199

Conread position: 9-215
Cow position: chrX:39288496-39288286 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 199

Conread position: 9-215
Cow position: chrX:47219583-47219371 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 37

Conread position: 9-216
Cow position: chrX:39386593-39386381 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 82, 0

Conread position: 9-229
Cow position: chrX:24006150-24005927 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 33

Conread position: 9-229
Cow position: chrX:25150865-25151089 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 23, 151

Conread position: 9-238
Cow position: chrX:2737954-2738184 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 80, 49

Conread position: 9-238
Cow position: chrX:4630019-4629777 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 9-238
Cow position: chrX:20710867-20711092 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 138, 39

Conread position: 9-238
Cow position: chrX:26883477-26883224 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 182
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 9-238
Cow position: chrX:30919722-30919480 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 9-238
Cow position: chrX:40515575-40515802 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 117, 125

Conread position: 9-239
Cow position: chrX:17282317-17282083 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 184

Conread position: 9-239
Cow position: chrX:25329685-25329925 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 110, 30

Conread position: 9-240
Cow position: chrX:19210718-19210482 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 55

Conread position: 9-240
Cow position: chrX:24169643-24169400 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 9-240
Cow position: chrX:25302080-25301841 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 189
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 89

Conread position: 9-240
Cow position: chrX:25924865-25924623 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 9-240
Cow position: chrX:27486082-27486320 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 169
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 9-244
Cow position: chrX:12852837-12852592 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 9-244
Cow position: chrX:21217915-21217676 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 171
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 75, 16

Conread position: 9-244
Cow position: chrX:24231447-24231213 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 124, 47

Conread position: 9-261
Cow position: chrX:44096225-44096488 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 9-262
Cow position: chrX:9011999-9012264 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 0

Conread position: 9-271
Cow position: chrX:21227146-21227415 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 80, 15

Conread position: 9-278
Cow position: chrX:7806050-7806330 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 64

Conread position: 9-281
Cow position: chrX:12347550-12347836 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 0

Conread position: 9-298
Cow position: chrX:29913011-29913312 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 77, 0

Conread position: 9-300
Cow position: chrX:27590361-27590064 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 219
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 121, 76

Conread position: 9-301
Cow position: chrX:25458965-25458661 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 9-305
Cow position: chrX:22578488-22578184 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 121, 30

Conread position: 9-307
Cow position: chrX:21785440-21785745 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 56

Conread position: 9-308
Cow position: chrX:2812738-2812429 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 26

Conread position: 9-308
Cow position: chrX:5320046-5319733 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 9-308
Cow position: chrX:6655595-6655284 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 9-308
Cow position: chrX:15590200-15589892 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 0

Conread position: 9-308
Cow position: chrX:16289890-16289579 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 83, 0

Conread position: 9-308
Cow position: chrX:16783166-16783470 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 135

Conread position: 9-308
Cow position: chrX:20029919-20030235 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 9-308
Cow position: chrX:20321095-20320785 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 9-308
Cow position: chrX:25741442-25741131 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 75, 0

Conread position: 9-308
Cow position: chrX:30823188-30823499 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 80, 0

Conread position: 9-308
Cow position: chrX:48490212-48489907 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 133, 261

Conread position: 9-320
Cow position: chrX:35609658-35609980 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 9-322
Cow position: chrX:19196846-19196520 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 77, 278

Conread position: 9-322
Cow position: chrX:20742658-20742984 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 9-322
Cow position: chrX:36373216-36373558 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 75, 294

Conread position: 9-322
Cow position: chrX:47362214-47361897 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 75, 219

Conread position: 9-328
Cow position: chrX:27498440-27498773 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 293

Conread position: 9-329
Cow position: chrX:26759897-26759564 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 9-330
Cow position: chrX:3361491-3361823 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 0

Conread position: 9-330
Cow position: chrX:30816597-30816264 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 9-330
Cow position: chrX:38051760-38051432 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 75, 119

Conread position: 9-330
Cow position: chrX:48205241-48204916 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 227
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 212

Conread position: 9-331
Cow position: chrX:5292219-5291885 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 123

Conread position: 9-331
Cow position: chrX:10302016-10302338 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 110, 75

Conread position: 9-331
Cow position: chrX:35681007-35681342 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 181

Conread position: 9-336
Cow position: chrX:23024376-23024712 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 75, 98

Conread position: 9-336
Cow position: chrX:48247161-48246848 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 78, 50

Conread position: 9-337
Cow position: chrX:14781673-14781335 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 77, 291

Conread position: 9-344
Cow position: chrX:16074248-16074595 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 73, 0

Conread position: 9-344
Cow position: chrX:24105298-24105639 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 267

Conread position: 9-348
Cow position: chrX:1975925-1975576 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 305

Conread position: 9-348
Cow position: chrX:2151260-2150913 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 241
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 75, 192

Conread position: 9-348
Cow position: chrX:12850804-12851154 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 77, 335

Conread position: 9-348
Cow position: chrX:14458495-14458152 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 195

Conread position: 9-354
Cow position: chrX:32309773-32310130 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 75, 263

Conread position: 9-360
Cow position: chrX:16279321-16279684 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 328

Conread position: 9-360
Cow position: chrX:18462303-18461941 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 254

Conread position: 9-360
Cow position: chrX:27305598-27305961 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 328

Conread position: 9-360
Cow position: chrX:27997322-27997681 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 75, 119

Conread position: 9-361
Cow position: chrX:22538282-22537910 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 259
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 9-361
Cow position: chrX:40544938-40544570 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 255
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 80, 0

Conread position: 9-369
Cow position: chrX:27761012-27761386 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 75, 319

Conread position: 9-440
Cow position: chrX:23414710-23414245 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 305
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 151

Conread position: 9-540
Cow position: chrX:47211178-47210621 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 367
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 75, 294

Conread position: 9-545
Cow position: chrX:13868369-13868924 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 430

Conread position: 9-559
Cow position: chrX:14974056-14973523 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 68

Conread position: 9-563
Cow position: chrX:42247504-42246945 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 91

Conread position: 10-119
Cow position: chrX:23038324-23038212 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 10-124
Cow position: chrX:30093691-30093577 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 98
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-128
Cow position: chrX:36794667-36794788 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 74, 0

Conread position: 10-154
Cow position: chrX:30337232-30337382 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 10-194
Cow position: chrX:17691933-17692122 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 74, 0

Conread position: 10-198
Cow position: chrX:8103420-8103227 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 10-201
Cow position: chrX:44930307-44930504 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 10-207
Cow position: chrX:18950072-18949870 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 154
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 10-207
Cow position: chrX:30060858-30060656 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 158

Conread position: 10-209
Cow position: chrX:5353630-5353426 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 10-209
Cow position: chrX:16853716-16853512 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 154
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 10-209
Cow position: chrX:24102652-24102856 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 162
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 79, 0

Conread position: 10-210
Cow position: chrX:2485958-2485753 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 155
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 0

Conread position: 10-210
Cow position: chrX:30141652-30141447 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 79, 0

Conread position: 10-212
Cow position: chrX:22568344-22568139 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 76, 25

Conread position: 10-228
Cow position: chrX:33205319-33205097 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 198

Conread position: 10-229
Cow position: chrX:23080966-23081192 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 74, 117

Conread position: 10-236
Cow position: chrX:33172285-33172051 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 10-237
Cow position: chrX:32144490-32144258 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 79, 167

Conread position: 10-239
Cow position: chrX:30180253-30180015 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 10-240
Cow position: chrX:5856839-5856605 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 74, 117

Conread position: 10-240
Cow position: chrX:23696739-23696499 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 34

Conread position: 10-240
Cow position: chrX:25205383-25205632 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 10-240
Cow position: chrX:44086977-44087219 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 10-240
Cow position: chrX:47743750-47743989 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 159
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 10-245
Cow position: chrX:24827012-24827246 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 118, 79

Conread position: 10-256
Cow position: chrX:24173495-24173237 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 74, 0

Conread position: 10-261
Cow position: chrX:35409341-35409592 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 120

Conread position: 10-268
Cow position: chrX:1550623-1550893 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 10-268
Cow position: chrX:38151361-38151632 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 79, 0

Conread position: 10-271
Cow position: chrX:29915552-29915280 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 79, 56

Conread position: 10-273
Cow position: chrX:39556143-39555888 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 195

Conread position: 10-304
Cow position: chrX:20878090-20877784 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 10-304
Cow position: chrX:32094777-32094471 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 10-307
Cow position: chrX:21415761-21416075 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 10-308
Cow position: chrX:15531482-15531172 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 10-308
Cow position: chrX:16703343-16703653 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 211
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 10-308
Cow position: chrX:16711627-16711937 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 10-308
Cow position: chrX:18078237-18077927 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 218
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 10-308
Cow position: chrX:18897978-18897672 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 118

Conread position: 10-308
Cow position: chrX:21319371-21319655 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 204
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 81, 37

Conread position: 10-308
Cow position: chrX:22493680-22493990 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 233

Conread position: 10-308
Cow position: chrX:23280679-23280986 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 0

Conread position: 10-308
Cow position: chrX:23386866-23386564 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 74, 132

Conread position: 10-308
Cow position: chrX:23396279-23396581 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 132

Conread position: 10-308
Cow position: chrX:24587781-24587471 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 0

Conread position: 10-308
Cow position: chrX:26531631-26531941 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 79, 0

Conread position: 10-308
Cow position: chrX:29083798-29084103 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 0

Conread position: 10-308
Cow position: chrX:30143611-30143302 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 220
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 79, 67

Conread position: 10-308
Cow position: chrX:30228437-30228130 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 32

Conread position: 10-308
Cow position: chrX:40180197-40179897 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 79, 117

Conread position: 10-312
Cow position: chrX:18024712-18025026 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 10-312
Cow position: chrX:30172037-30171723 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 223
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 0

Conread position: 10-322
Cow position: chrX:43979291-43979618 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 72, 0

Conread position: 10-327
Cow position: chrX:25337850-25338182 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 10-329
Cow position: chrX:48248496-48248825 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 76, 274

Conread position: 10-330
Cow position: chrX:45932677-45933009 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 79, 327

Conread position: 10-331
Cow position: chrX:28097803-28098114 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 79, 45

Conread position: 10-334
Cow position: chrX:7054062-7053724 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 10-338
Cow position: chrX:1810488-1810156 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 164

Conread position: 10-348
Cow position: chrX:1576590-1576241 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 244
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 334

Conread position: 10-348
Cow position: chrX:16285882-16286231 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 242
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 76, 273

Conread position: 10-348
Cow position: chrX:30199319-30198970 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 74, 316

Conread position: 10-360
Cow position: chrX:27594507-27594147 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 325

Conread position: 10-361
Cow position: chrX:21833558-21833923 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 79, 0

Conread position: 10-411
Cow position: chrX:11949820-11949409 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 273
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 79, 268

Conread position: 10-412
Cow position: chrX:2425449-2425025 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 277
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 0

Conread position: 10-412
Cow position: chrX:4905316-4904894 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 310

Conread position: 10-412
Cow position: chrX:24441574-24441155 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 279
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 312

Conread position: 10-412
Cow position: chrX:35240537-35240958 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 326

Conread position: 10-412
Cow position: chrX:37133861-37133441 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 275
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 79, 312

Conread position: 10-415
Cow position: chrX:7645931-7646347 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 193

Conread position: 10-431
Cow position: chrX:10412313-10411874 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 131

Conread position: 10-541
Cow position: chrX:18244662-18245211 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 351
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 74, 114

Conread position: 11-164
Cow position: chrX:47654978-47655132 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 117

Conread position: 11-206
Cow position: chrX:5640945-5640759 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 11-207
Cow position: chrX:529477-529675 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 44, 126

Conread position: 11-240
Cow position: chrX:38140358-38140122 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 41

Conread position: 11-240
Cow position: chrX:44907990-44908229 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 48

Conread position: 11-273
Cow position: chrX:29777716-29777989 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 75, 190

Conread position: 11-330
Cow position: chrX:29780419-29780746 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 81, 176

Conread position: 11-344
Cow position: chrX:29356261-29356606 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 235
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 75, 0

Conread position: 11-348
Cow position: chrX:15008758-15008412 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 262

Conread position: 11-348
Cow position: chrX:29844802-29844454 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 333

Conread position: 11-486
Cow position: chrX:42171622-42171129 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 425

Conread position: 11-559
Cow position: chrX:35268564-35269090 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 142

Conread position: 11-567
Cow position: chrX:26492676-26493251 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 444

Conread position: 12-131
Cow position: chrX:17892218-17892340 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 12-206
Cow position: chrX:31955569-31955372 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 72, 170

Conread position: 12-210
Cow position: chrX:27458930-27459134 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 77, 0

Conread position: 12-215
Cow position: chrX:29024124-29024330 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 72, 146

Conread position: 12-245
Cow position: chrX:41846859-41846624 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 72, 202

Conread position: 12-301
Cow position: chrX:27318890-27319193 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 175
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 12-307
Cow position: chrX:32584138-32583831 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 77, 0

Conread position: 12-308
Cow position: chrX:2478952-2478645 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 99

Conread position: 12-308
Cow position: chrX:5376044-5376353 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 209
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 12-308
Cow position: chrX:30159336-30159028 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 77, 0

Conread position: 12-331
Cow position: chrX:23215782-23216113 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 12-412
Cow position: chrX:7551120-7550708 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 274
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 72, 364

Conread position: 12-558
Cow position: chrX:36010217-36009676 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 357
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 119

Conread position: 12-561
Cow position: chrX:23122059-23122631 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 379
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 41, 53

Conread position: 12-562
Cow position: chrX:5638493-5637944 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 258

Conread position: 13-131
Cow position: chrX:10348158-10348037 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 13-238
Cow position: chrX:33822780-33823011 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 34

Conread position: 13-240
Cow position: chrX:42585389-42585161 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 73, 21

Conread position: 13-323
Cow position: chrX:36692911-36693229 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 76, 171

Conread position: 13-361
Cow position: chrX:29848955-29848599 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 252
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 228

Conread position: 14-410
Cow position: chrX:21063963-21064375 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 164

Conread position: 15-171
Cow position: chrX:9044178-9044019 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 71, 59

Conread position: 15-330
Cow position: chrX:27469976-27469649 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 69, 0

Conread position: 15-421
Cow position: chrX:9161266-9161677 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 254

Conread position: 16-348
Cow position: chrX:22521416-22521077 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 190
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 117, 65

Conread position: 17-280
Cow position: chrX:6012427-6012153 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 72, 159

Conread position: 17-321
Cow position: chrX:4404216-4404528 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 7

Conread position: 17-322
Cow position: chrX:20580072-20579753 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 191
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 151

Conread position: 17-360
Cow position: chrX:828572-828922 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 242
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 69, 61

Conread position: 17-378
Cow position: chrX:34990721-34991093 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 177

Conread position: 18-216
Cow position: chrX:45973999-45973797 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 66, 134

Conread position: 20-209
Cow position: chrX:616720-616528 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 156
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 106, 0

Conread position: 20-210
Cow position: chrX:16229293-16229097 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 66, 165

Conread position: 20-210
Cow position: chrX:36364902-36365097 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 20-210
Cow position: chrX:45420992-45420795 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 69, 0

Conread position: 20-215
Cow position: chrX:18647584-18647393 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 52

Conread position: 20-245
Cow position: chrX:26619678-26619446 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 66, 17

Conread position: 20-308
Cow position: chrX:25575645-25575942 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 88

Conread position: 20-321
Cow position: chrX:28157170-28157490 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 234
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 69, 15

Conread position: 20-322
Cow position: chrX:20376653-20376960 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 20-346
Cow position: chrX:30162680-30163018 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 20-348
Cow position: chrX:3658371-3658032 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 64, 324

Conread position: 20-348
Cow position: chrX:39667510-39667171 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 64, 324

Conread position: 21-331
Cow position: chrX:28845528-28845835 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 159

Conread position: 22-268
Cow position: chrX:40121330-40121076 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 22-306
Cow position: chrX:25713494-25713770 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 190, 41

Conread position: 22-308
Cow position: chrX:4869228-4869526 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 22-308
Cow position: chrX:14152530-14152240 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 225

Conread position: 22-337
Cow position: chrX:39704390-39704704 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 69, 35

Conread position: 22-348
Cow position: chrX:43101212-43101547 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 64, 276

Conread position: 22-360
Cow position: chrX:42779441-42779091 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 240
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 64, 315

Conread position: 23-308
Cow position: chrX:42165761-42166058 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 63, 0

Conread position: 23-319
Cow position: chrX:15304639-15304350 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 209
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 161

Conread position: 23-385
Cow position: chrX:19188622-19188995 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 24-164
Cow position: chrX:37129010-37129151 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 24-308
Cow position: chrX:3895289-3894993 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 209
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 24-320
Cow position: chrX:45373605-45373301 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 134

Conread position: 25-209
Cow position: chrX:33615093-33615282 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 159

Conread position: 25-254
Cow position: chrX:45465922-45466166 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 62, 144

Conread position: 25-308
Cow position: chrX:25946146-25945854 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 25-561
Cow position: chrX:7350990-7351537 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 132

Conread position: 26-322
Cow position: chrX:21011633-21011323 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 26-337
Cow position: chrX:20751956-20752260 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 210
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 58

Conread position: 28-195
Cow position: chrX:45410352-45410179 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 28-240
Cow position: chrX:38794416-38794639 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 30-210
Cow position: chrX:4325804-4325619 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 31-228
Cow position: chrX:48135186-48134984 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 31-240
Cow position: chrX:25618224-25617998 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 31-273
Cow position: chrX:24125377-24125125 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 244

Conread position: 31-278
Cow position: chrX:23061148-23061394 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 155

Conread position: 31-321
Cow position: chrX:20709769-20710065 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 74

Conread position: 31-331
Cow position: chrX:33466311-33466610 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 95

Conread position: 31-344
Cow position: chrX:14924694-14925016 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 126

Conread position: 31-350
Cow position: chrX:11314084-11313758 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 51, 97

Conread position: 31-559
Cow position: chrX:47873647-47873104 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 349
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 135

Conread position: 32-210
Cow position: chrX:5919165-5919350 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 45, 86

Conread position: 32-240
Cow position: chrX:27019898-27020104 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 157
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 52, 146

Conread position: 32-245
Cow position: chrX:20787474-20787264 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 45

Conread position: 32-300
Cow position: chrX:30021403-30021123 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 0

Conread position: 32-348
Cow position: chrX:12032666-12032993 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 228
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 54, 312

Conread position: 32-427
Cow position: chrX:45414605-45414196 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 33-240
Cow position: chrX:41733491-41733280 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 94

Conread position: 33-338
Cow position: chrX:5047201-5046892 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 55, 102

Conread position: 34-322
Cow position: chrX:6038225-6037924 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 35-559
Cow position: chrX:30133626-30133090 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 368
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 54, 128

Conread position: 37-313
Cow position: chrX:33020186-33020467 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 211

Conread position: 38-238
Cow position: chrX:4483845-4484053 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 47, 151

Conread position: 38-267
Cow position: chrX:14221784-14222021 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 86

Conread position: 38-294
Cow position: chrX:44835115-44834845 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 38-539
Cow position: chrX:35273045-35273586 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 250

Conread position: 38-542
Cow position: chrX:1176273-1175773 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 346
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 90

Conread position: 39-240
Cow position: chrX:39347084-39346872 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 39-338
Cow position: chrX:19015144-19015440 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 39-369
Cow position: chrX:38102741-38102403 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 50, 18

Conread position: 39-464
Cow position: chrX:41238661-41238209 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 96

Conread position: 40-348
Cow position: chrX:35497789-35498108 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 304

Conread position: 41-212
Cow position: chrX:41886091-41885915 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 41-268
Cow position: chrX:46606806-46606570 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 94

Conread position: 41-318
Cow position: chrX:754662-754951 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 207
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 48, 0

Conread position: 41-322
Cow position: chrX:21598382-21598660 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 48, 87

Conread position: 41-348
Cow position: chrX:16478606-16478924 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 303

Conread position: 42-559
Cow position: chrX:38641969-38642476 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 15

Conread position: 43-245
Cow position: chrX:24193815-24194023 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 43-344
Cow position: chrX:20021269-20021582 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 283

Conread position: 44-200
Cow position: chrX:24291975-24291814 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 44-213
Cow position: chrX:48456638-48456464 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 44-304
Cow position: chrX:23451464-23451190 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 44-304
Cow position: chrX:29066148-29066416 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 42, 0

Conread position: 44-338
Cow position: chrX:158063-157766 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 7, 81

Conread position: 44-348
Cow position: chrX:24577858-24577543 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 42, 300

Conread position: 44-351
Cow position: chrX:25237885-25238188 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 68

Conread position: 44-360
Cow position: chrX:33983898-33983571 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 8, 13

Conread position: 44-361
Cow position: chrX:23264730-23264399 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 44-412
Cow position: chrX:18194620-18195008 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 253
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 44-542
Cow position: chrX:46033011-46032511 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 84

Conread position: 45-558
Cow position: chrX:4269359-4268836 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 351
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 36, 276

Conread position: 47-245
Cow position: chrX:37102331-37102140 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 89

Conread position: 47-249
Cow position: chrX:5507386-5507596 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 208

Conread position: 47-253
Cow position: chrX:48675786-48676000 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 47-338
Cow position: chrX:35041932-35042235 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 47-348
Cow position: chrX:24903794-24904106 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 39, 108

Conread position: 48-185
Cow position: chrX:42928071-42927933 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 48, 68

Conread position: 48-559
Cow position: chrX:22482978-22482455 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 286

Conread position: 49-534
Cow position: chrX:31294828-31294360 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 101

Conread position: 50-443
Cow position: chrX:48195328-48194913 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 284
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 42, 407

Conread position: 51-183
Cow position: chrX:17888072-17888209 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 51-254
Cow position: chrX:36514167-36514373 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 175

Conread position: 51-322
Cow position: chrX:45939732-45939456 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 186
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 165

Conread position: 51-344
Cow position: chrX:16808042-16807737 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 35, 230

Conread position: 51-443
Cow position: chrX:46723027-46722612 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 407

Conread position: 52-273
Cow position: chrX:42590043-42589813 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 201

Conread position: 53-240
Cow position: chrX:37761707-37761892 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 72, 39

Conread position: 54-270
Cow position: chrX:45693823-45694046 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 196

Conread position: 54-360
Cow position: chrX:36931035-36931348 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 79

Conread position: 54-428
Cow position: chrX:37836306-37836687 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 325

Conread position: 55-262
Cow position: chrX:29907511-29907293 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 31, 0

Conread position: 56-207
Cow position: chrX:25587155-25587310 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 56-270
Cow position: chrX:31556779-31556554 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 33, 219

Conread position: 56-330
Cow position: chrX:1749790-1749504 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 198
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 56-348
Cow position: chrX:10293443-10293140 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 288

Conread position: 56-376
Cow position: chrX:42874697-42875038 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 56-412
Cow position: chrX:2467599-2467977 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 46

Conread position: 56-559
Cow position: chrX:16762491-16763007 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 132

Conread position: 57-304
Cow position: chrX:9997611-9997361 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 0

Conread position: 57-308
Cow position: chrX:20353347-20353083 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 57-330
Cow position: chrX:22915185-22915471 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 57-330
Cow position: chrX:40647698-40647988 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 57-541
Cow position: chrX:8730799-8731310 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 257

Conread position: 59-348
Cow position: chrX:23703043-23702743 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 27, 285

Conread position: 59-360
Cow position: chrX:26709326-26709639 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 223
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 27, 278

Conread position: 59-360
Cow position: chrX:34175476-34175163 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 215
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 27, 285

Conread position: 59-449
Cow position: chrX:8925428-8925828 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 144

Conread position: 60-210
Cow position: chrX:28603191-28603039 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 69

Conread position: 60-236
Cow position: chrX:29925853-29925674 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 81

Conread position: 60-240
Cow position: chrX:48211258-48211066 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 60-322
Cow position: chrX:27751512-27751242 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 190

Conread position: 60-326
Cow position: chrX:12017998-12018288 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 135

Conread position: 60-431
Cow position: chrX:35413353-35413722 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 136

Conread position: 61-210
Cow position: chrX:12314078-12314232 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 61-234
Cow position: chrX:16531723-16531901 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 28, 0

Conread position: 61-337
Cow position: chrX:48800261-48800540 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 54

Conread position: 62-308
Cow position: chrX:2963775-2964032 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 27, 205

Conread position: 62-315
Cow position: chrX:34270141-34270386 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 178, 57

Conread position: 62-319
Cow position: chrX:47191670-47191422 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 72, 35

Conread position: 62-330
Cow position: chrX:22549029-22549309 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 62-331
Cow position: chrX:7496974-7497241 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 148, 22

Conread position: 64-229
Cow position: chrX:5856596-5856424 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 64

Conread position: 64-262
Cow position: chrX:16835204-16835414 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 64-330
Cow position: chrX:15094093-15094371 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 64-330
Cow position: chrX:37416348-37416071 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 25, 0

Conread position: 64-542
Cow position: chrX:9635448-9634975 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 20

Conread position: 65-322
Cow position: chrX:488218-488484 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 66-253
Cow position: chrX:46990058-46989867 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 9

Conread position: 68-337
Cow position: chrX:10095757-10096038 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 23, 195

Conread position: 68-443
Cow position: chrX:45404103-45403703 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 276
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 23, 392

Conread position: 70-208
Cow position: chrX:11459827-11459684 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 70-329
Cow position: chrX:16734290-16734560 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 63

Conread position: 70-348
Cow position: chrX:5300625-5300914 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 274

Conread position: 70-348
Cow position: chrX:19333436-19333147 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 16, 274

Conread position: 70-348
Cow position: chrX:41414051-41413762 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 16, 274

Conread position: 70-360
Cow position: chrX:2580132-2580434 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 210
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 16, 267

Conread position: 70-360
Cow position: chrX:22815674-22815976 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 203
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 16, 274

Conread position: 70-488
Cow position: chrX:17725711-17726143 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 59

Conread position: 70-559
Cow position: chrX:40183617-40183119 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 277

Conread position: 74-330
Cow position: chrX:27704516-27704248 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 75-330
Cow position: chrX:2933460-2933724 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 14, 54

Conread position: 76-242
Cow position: chrX:45959321-45959144 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 77-240
Cow position: chrX:42500235-42500401 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 51

Conread position: 81-554
Cow position: chrX:27509273-27508795 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 178

Conread position: 84-205
Cow position: chrX:5556081-5555959 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 84-237
Cow position: chrX:47247159-47247005 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 49, 121

Conread position: 84-253
Cow position: chrX:31473272-31473450 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 84-308
Cow position: chrX:46382026-46381803 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 163
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 205

Conread position: 84-322
Cow position: chrX:11498875-11498627 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 84-322
Cow position: chrX:46425002-46424756 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 49, 0

Conread position: 84-330
Cow position: chrX:5288407-5288152 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 170
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 84-336
Cow position: chrX:22856782-22857043 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 84-343
Cow position: chrX:16084911-16084643 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 49

Conread position: 84-344
Cow position: chrX:30245305-30245038 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 239

Conread position: 84-348
Cow position: chrX:27325035-27324763 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 193
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 50

Conread position: 84-348
Cow position: chrX:39520705-39520433 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 257

Conread position: 84-354
Cow position: chrX:37956118-37956383 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 16

Conread position: 84-360
Cow position: chrX:2576194-2575913 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 188
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 22

Conread position: 84-405
Cow position: chrX:17541714-17542044 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 178

Conread position: 84-538
Cow position: chrX:28878412-28877953 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 314
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 53, 109

Conread position: 84-542
Cow position: chrX:47588451-47588930 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 316
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 102

Conread position: 84-559
Cow position: chrX:23497913-23497464 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 119

Conread position: 84-559
Cow position: chrX:25816146-25815665 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 114

Conread position: 84-561
Cow position: chrX:24366079-24365586 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 333
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 118, 32

Conread position: 85-240
Cow position: chrX:45787405-45787561 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 128

Conread position: 85-249
Cow position: chrX:30462410-30462246 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 42, 9

Conread position: 85-360
Cow position: chrX:45425074-45424790 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 249

Conread position: 86-265
Cow position: chrX:48536914-48536727 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 15, 57

Conread position: 86-542
Cow position: chrX:20151602-20152065 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 319
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 43, 112

Conread position: 86-563
Cow position: chrX:32020370-32019895 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 247

Conread position: 87-360
Cow position: chrX:9572276-9572558 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 247

Conread position: 87-360
Cow position: chrX:9976189-9976471 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 247

Conread position: 87-477
Cow position: chrX:17888652-17888265 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 265
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 43, 7

Conread position: 87-562
Cow position: chrX:41673855-41674332 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 335
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 26, 79

Conread position: 87-563
Cow position: chrX:27432166-27431683 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 352

Conread position: 88-322
Cow position: chrX:28769869-28769621 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 88-351
Cow position: chrX:13323247-13322971 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 179

Conread position: 89-240
Cow position: chrX:30763665-30763513 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 31

Conread position: 91-322
Cow position: chrX:678811-678580 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 31, 143

Conread position: 91-541
Cow position: chrX:27514626-27515075 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 306
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 42, 8

Conread position: 92-306
Cow position: chrX:4942991-4942780 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 41, 17

Conread position: 92-426
Cow position: chrX:17662839-17662492 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 320

Conread position: 93-207
Cow position: chrX:48578174-48578290 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 93-209
Cow position: chrX:47243520-47243401 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 93-245
Cow position: chrX:33519376-33519530 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 40, 120

Conread position: 93-276
Cow position: chrX:42530692-42530510 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 60

Conread position: 93-277
Cow position: chrX:42499270-42499077 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 0

Conread position: 93-278
Cow position: chrX:23970148-23970332 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 37, 104

Conread position: 93-284
Cow position: chrX:9855059-9855259 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 0

Conread position: 93-284
Cow position: chrX:9953900-9954100 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 40, 0

Conread position: 93-287
Cow position: chrX:31745288-31745084 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 152

Conread position: 93-288
Cow position: chrX:46984743-46984533 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 93-291
Cow position: chrX:2206785-2206589 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 40, 109

Conread position: 93-308
Cow position: chrX:46044803-46045024 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 37, 197

Conread position: 93-310
Cow position: chrX:8517635-8517849 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 59

Conread position: 93-311
Cow position: chrX:25411599-25411822 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 86, 37

Conread position: 93-314
Cow position: chrX:24132392-24132166 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 35, 51

Conread position: 93-319
Cow position: chrX:40540383-40540152 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 105, 159

Conread position: 93-330
Cow position: chrX:1105045-1104799 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 241

Conread position: 93-330
Cow position: chrX:40692979-40692751 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 37, 78

Conread position: 93-336
Cow position: chrX:29032176-29032419 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 173, 39

Conread position: 93-338
Cow position: chrX:16416267-16416515 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 177
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 40, 50

Conread position: 93-349
Cow position: chrX:47249029-47248767 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 207

Conread position: 93-350
Cow position: chrX:16284188-16283923 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 226

Conread position: 93-355
Cow position: chrX:7425223-7425493 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 89

Conread position: 93-368
Cow position: chrX:2029149-2029433 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 201
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 37, 160

Conread position: 93-391
Cow position: chrX:26876122-26875811 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 52

Conread position: 93-421
Cow position: chrX:6563271-6563621 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 36, 67

Conread position: 93-421
Cow position: chrX:19878827-19879140 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 228
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 223, 33

Conread position: 93-421
Cow position: chrX:21004443-21004786 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 37

Conread position: 93-423
Cow position: chrX:22624240-22624579 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 246
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 40, 69

Conread position: 93-458
Cow position: chrX:37119358-37119731 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 256
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 40, 83

Conread position: 93-482
Cow position: chrX:619249-618847 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 327

Conread position: 93-488
Cow position: chrX:41884659-41884245 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 381

Conread position: 93-523
Cow position: chrX:33493534-33493981 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 165

Conread position: 93-524
Cow position: chrX:21672310-21672761 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 364

Conread position: 93-542
Cow position: chrX:27394255-27393801 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 112

Conread position: 93-542
Cow position: chrX:34543546-34544003 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 74

Conread position: 93-542
Cow position: chrX:38935040-38935496 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 317
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 34, 176

Conread position: 93-556
Cow position: chrX:13382083-13382575 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 293

Conread position: 93-558
Cow position: chrX:44961506-44961988 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 315
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 42, 343

Conread position: 93-561
Cow position: chrX:42492751-42492282 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 24

Conread position: 93-563
Cow position: chrX:7513275-7513747 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 336
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 99, 200

Conread position: 93-564
Cow position: chrX:39558589-39558110 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 129

Conread position: 93-640
Cow position: chrX:23514259-23513688 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 59

Conread position: 94-240
Cow position: chrX:37364507-37364651 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 94-241
Cow position: chrX:20167964-20168118 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 94-320
Cow position: chrX:9416933-9416702 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 174
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 39, 0

Conread position: 94-321
Cow position: chrX:35284377-35284612 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 31, 110

Conread position: 94-321
Cow position: chrX:39938757-39938531 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 107, 28

Conread position: 94-321
Cow position: chrX:42282196-42282420 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 111, 27

Conread position: 94-329
Cow position: chrX:30833078-30832848 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 118, 32

Conread position: 94-331
Cow position: chrX:44053018-44053261 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 94-421
Cow position: chrX:1514644-1514317 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 109

Conread position: 94-421
Cow position: chrX:43567699-43568021 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 39, 82

Conread position: 94-466
Cow position: chrX:17631042-17630655 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 267
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 39, 167

Conread position: 95-240
Cow position: chrX:8492997-8492844 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 95-416
Cow position: chrX:45598843-45598508 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 146

Conread position: 95-442
Cow position: chrX:11939163-11938810 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 43

Conread position: 95-560
Cow position: chrX:9360644-9361119 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 311
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 35, 84

Conread position: 96-210
Cow position: chrX:7710929-7710814 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 96-240
Cow position: chrX:6607183-6607333 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 96-310
Cow position: chrX:19930419-19930631 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 35, 6

Conread position: 96-319
Cow position: chrX:40788965-40789198 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 172

Conread position: 96-331
Cow position: chrX:24259816-24259580 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 101, 30

Conread position: 96-348
Cow position: chrX:23827351-23827611 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 37, 245

Conread position: 96-381
Cow position: chrX:41167202-41166902 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 198

Conread position: 96-428
Cow position: chrX:27680165-27680507 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 167

Conread position: 96-542
Cow position: chrX:21663071-21663512 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 296
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 37, 51

Conread position: 97-299
Cow position: chrX:40116188-40116390 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 36

Conread position: 97-308
Cow position: chrX:28856740-28856952 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 102

Conread position: 97-360
Cow position: chrX:48387421-48387688 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 177
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 235

Conread position: 97-488
Cow position: chrX:6690485-6690091 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 36, 103

Conread position: 97-508
Cow position: chrX:27772193-27771783 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 286
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 103, 33

Conread position: 98-360
Cow position: chrX:30689105-30689376 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 240

Conread position: 98-400
Cow position: chrX:11589828-11589509 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 81

Conread position: 98-412
Cow position: chrX:15814861-15815177 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 234
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 35, 88

Conread position: 98-458
Cow position: chrX:30421175-30420813 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 191

Conread position: 99-592
Cow position: chrX:22074565-22075059 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 192

Conread position: 100-240
Cow position: chrX:37067099-37067250 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 100-314
Cow position: chrX:2383255-2383473 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 100-322
Cow position: chrX:25571230-25571004 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 142

Conread position: 100-322
Cow position: chrX:47757163-47756935 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 33, 175

Conread position: 100-368
Cow position: chrX:6639890-6640144 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 30, 151

Conread position: 100-479
Cow position: chrX:32623349-32623732 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 267
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 33, 12

Conread position: 100-538
Cow position: chrX:36197733-36198189 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 306
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 89

Conread position: 100-541
Cow position: chrX:38549214-38549662 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 148

Conread position: 101-308
Cow position: chrX:29859210-29858995 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 101-331
Cow position: chrX:19841891-19841658 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 50

Conread position: 101-541
Cow position: chrX:9201314-9201759 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 368

Conread position: 101-551
Cow position: chrX:36975716-36976179 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 311
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 27, 192

Conread position: 101-559
Cow position: chrX:17231501-17231971 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 112

Conread position: 102-226
Cow position: chrX:27176552-27176424 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 102-318
Cow position: chrX:6278738-6278512 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 31, 0

Conread position: 102-321
Cow position: chrX:877255-877042 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 28, 118

Conread position: 102-322
Cow position: chrX:22524761-22524530 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 102-322
Cow position: chrX:42339168-42338953 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 169
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 31, 103

Conread position: 102-331
Cow position: chrX:41198872-41199107 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 31, 191

Conread position: 102-434
Cow position: chrX:45566398-45566738 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 32, 178

Conread position: 102-542
Cow position: chrX:48010362-48010822 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 300
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 25, 354

Conread position: 102-559
Cow position: chrX:30963104-30962641 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 324

Conread position: 103-238
Cow position: chrX:5900226-5900363 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 111

Conread position: 103-240
Cow position: chrX:10462406-10462545 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 93

Conread position: 103-314
Cow position: chrX:2648581-2648369 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 27, 89

Conread position: 103-336
Cow position: chrX:18456161-18456404 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 78

Conread position: 103-337
Cow position: chrX:15996923-15997169 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 227

Conread position: 103-348
Cow position: chrX:47538600-47538853 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 238

Conread position: 103-363
Cow position: chrX:14900952-14900688 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 195
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 142

Conread position: 103-451
Cow position: chrX:37910222-37910576 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 250
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 30, 14

Conread position: 103-534
Cow position: chrX:22821816-22822264 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 297
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 143

Conread position: 103-559
Cow position: chrX:12980060-12979599 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 10

Conread position: 104-347
Cow position: chrX:37048811-37048562 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 23, 147

Conread position: 104-535
Cow position: chrX:35542661-35543094 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 206

Conread position: 104-540
Cow position: chrX:42381330-42380897 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 115

Conread position: 104-560
Cow position: chrX:7721754-7722214 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 357

Conread position: 105-273
Cow position: chrX:18812029-18812196 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 96, 19

Conread position: 105-322
Cow position: chrX:1728646-1728436 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 90, 27

Conread position: 105-351
Cow position: chrX:11746613-11746870 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 105-359
Cow position: chrX:21664952-21664689 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 35

Conread position: 105-362
Cow position: chrX:13265849-13265590 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 28, 116

Conread position: 106-245
Cow position: chrX:4482734-4482880 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 78

Conread position: 106-301
Cow position: chrX:24234706-24234504 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 106-322
Cow position: chrX:35925739-35925949 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 20

Conread position: 107-315
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 93

Conread position: 107-320
Cow position: chrX:13245364-13245586 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 73

Conread position: 107-337
Cow position: chrX:11856202-11856436 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 26, 40

Conread position: 108-413
Cow position: chrX:4865025-4865327 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 93

Conread position: 109-313
Cow position: chrX:29509669-29509458 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 164
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 109-330
Cow position: chrX:46315604-46315379 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 92, 214

Conread position: 109-359
Cow position: chrX:20792043-20791785 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 157

Conread position: 109-415
Cow position: chrX:9041454-9041148 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 140

Conread position: 109-466
Cow position: chrX:41083700-41084062 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 237
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 55

Conread position: 109-542
Cow position: chrX:21642703-21642264 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 292
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 48

Conread position: 109-559
Cow position: chrX:4750523-4750104 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 29

Conread position: 110-278
Cow position: chrX:13191768-13191596 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 110-450
Cow position: chrX:17042466-17042813 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 212

Conread position: 111-297
Cow position: chrX:16541899-16541704 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 111-360
Cow position: chrX:24450398-24450140 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 230

Conread position: 111-410
Cow position: chrX:6265809-6265508 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 18, 80

Conread position: 111-542
Cow position: chrX:6488363-6488782 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 303
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 21, 86

Conread position: 112-226
Cow position: chrX:29193786-29193903 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 63

Conread position: 112-405
Cow position: chrX:36961414-36961723 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 272

Conread position: 113-450
Cow position: chrX:37574635-37574971 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 82

Conread position: 113-463
Cow position: chrX:45110433-45110798 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 19

Conread position: 114-320
Cow position: chrX:280914-281114 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 202, 16

Conread position: 114-458
Cow position: chrX:1503119-1503466 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 236
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 16, 175

Conread position: 114-458
Cow position: chrX:46073042-46072678 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 16, 0

Conread position: 114-473
Cow position: chrX:23091661-23092025 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 16, 138

Conread position: 114-542
Cow position: chrX:36283125-36283557 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 224

Conread position: 114-567
Cow position: chrX:29602053-29601587 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 362

Conread position: 115-331
Cow position: chrX:2701031-2700812 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 27, 11

Conread position: 115-563
Cow position: chrX:36355907-36356339 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 305
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 17

Conread position: 116-563
Cow position: chrX:11633460-11633917 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 320

Conread position: 117-338
Cow position: chrX:28836121-28835899 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 130

Conread position: 117-451
Cow position: chrX:29120841-29121179 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 198, 72

Conread position: 117-559
Cow position: chrX:37781330-37780879 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 15

Conread position: 118-322
Cow position: chrX:8070916-8070704 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 123-541
Cow position: chrX:16996297-16996710 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 271
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 117, 80

Conread position: 123-563
Cow position: chrX:3579735-3580183 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 75, 171

Conread position: 126-291
Cow position: chrX:16324170-16324003 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 0

Conread position: 126-301
Cow position: chrX:46430064-46429889 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 74, 168

Conread position: 126-331
Cow position: chrX:26285773-26285981 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 72, 137

Conread position: 126-331
Cow position: chrX:45015380-45015582 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 124, 65

Conread position: 126-390
Cow position: chrX:26940698-26940439 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 233, 70

Conread position: 126-450
Cow position: chrX:45845889-45846232 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 236
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 250

Conread position: 126-463
Cow position: chrX:10959607-10959251 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 126-465
Cow position: chrX:4826034-4825690 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 230
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 67, 114

Conread position: 126-497
Cow position: chrX:9425948-9425578 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 86, 120

Conread position: 126-519
Cow position: chrX:47046726-47046319 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 264
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 273

Conread position: 126-541
Cow position: chrX:841952-842371 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 285
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 114, 299

Conread position: 126-550
Cow position: chrX:40035652-40035212 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 131

Conread position: 126-559
Cow position: chrX:27174788-27175234 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 305
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 321

Conread position: 126-559
Cow position: chrX:38852990-38853444 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 167

Conread position: 126-559
Cow position: chrX:40567393-40567839 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 290
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 159

Conread position: 126-563
Cow position: chrX:29542425-29541991 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 296

Conread position: 126-563
Cow position: chrX:46587611-46588060 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 304
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 82, 325

Conread position: 126-564
Cow position: chrX:34411633-34412087 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 347

Conread position: 126-568
Cow position: chrX:32420012-32420456 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 305
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 72, 162

Conread position: 128-542
Cow position: chrX:28013644-28013223 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 278
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 61

Conread position: 129-328
Cow position: chrX:17908487-17908292 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 66

Conread position: 129-416
Cow position: chrX:31340501-31340805 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 296

Conread position: 130-523
Cow position: chrX:36067817-36068222 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 95

Conread position: 132-437
Cow position: chrX:43780053-43779724 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 223
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 105

Conread position: 132-537
Cow position: chrX:1499469-1499866 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 289
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 121, 66

Conread position: 133-443
Cow position: chrX:45148975-45149290 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 67, 190

Conread position: 134-273
Cow position: chrX:29770377-29770230 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 134-547
Cow position: chrX:29545078-29544664 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 49

Conread position: 135-354
Cow position: chrX:40809489-40809718 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 135-542
Cow position: chrX:10252379-10251985 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 15

Conread position: 135-559
Cow position: chrX:33000706-33001132 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 292
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 293

Conread position: 139-373
Cow position: chrX:18195748-18195974 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 101, 50

Conread position: 142-344
Cow position: chrX:37540934-37541136 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 98, 147

Conread position: 142-439
Cow position: chrX:47362802-47362503 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 199
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 124

Conread position: 142-487
Cow position: chrX:23785463-23785812 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 238
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 70, 160

Conread position: 142-487
Cow position: chrX:31311835-31312199 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 150

Conread position: 142-564
Cow position: chrX:8869599-8869165 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 109

Conread position: 143-304
Cow position: chrX:24149450-24149615 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 143-318
Cow position: chrX:1505523-1505697 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 23

Conread position: 146-322
Cow position: chrX:31256681-31256858 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 147-542
Cow position: chrX:35383205-35382825 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 263
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 134

Conread position: 149-346
Cow position: chrX:45759214-45759412 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 167, 47

Conread position: 150-550
Cow position: chrX:32820847-32821265 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 11

Conread position: 151-321
Cow position: chrX:7336645-7336820 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 24, 160

Conread position: 154-515
Cow position: chrX:31252239-31252598 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 255
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 57, 20

Conread position: 155-438
Cow position: chrX:38066616-38066336 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 169, 20

Conread position: 155-557
Cow position: chrX:47186498-47186095 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 267
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 43, 128

Conread position: 157-328
Cow position: chrX:23341143-23340968 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 136

Conread position: 157-563
Cow position: chrX:18485619-18486041 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 281
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 108

Conread position: 157-563
Cow position: chrX:27145447-27145835 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 148

Conread position: 160-563
Cow position: chrX:6407376-6407784 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 280
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 53, 110

Conread position: 161-557
Cow position: chrX:34792482-34792091 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 286
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 53, 229

Conread position: 162-542
Cow position: chrX:25208017-25207644 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 261
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 160

Conread position: 163-541
Cow position: chrX:27227955-27228345 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 38, 15

Conread position: 180-315
Cow position: chrX:10366373-10366241 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 180-451
Cow position: chrX:20584166-20584460 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 210
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 183-514
Cow position: chrX:29680409-29680070 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 18, 262

Conread position: 184-487
Cow position: chrX:9365822-9365508 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 283

Conread position: 184-512
Cow position: chrX:39415518-39415178 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 218
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 84

Conread position: 192-539
Cow position: chrX:34313889-34314235 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 22

Conread position: 192-558
Cow position: chrX:41870933-41871290 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 258
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 76

Conread position: 197-458
Cow position: chrX:37986100-37986364 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 115, 70

Conread position: 197-486
Cow position: chrX:11085190-11084894 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 43, 107

Conread position: 197-542
Cow position: chrX:21986425-21986084 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 119, 170

Conread position: 197-568
Cow position: chrX:616395-615996 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 274
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 121, 0

Conread position: 197-601
Cow position: chrX:18204596-18204185 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 270
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 254

Conread position: 198-558
Cow position: chrX:40685463-40685096 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 269

Conread position: 198-563
Cow position: chrX:5919364-5919725 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 248
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 118, 68

Conread position: 205-560
Cow position: chrX:34505172-34504818 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 260
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 114, 63

Conread position: 210-559
Cow position: chrX:26881688-26881328 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 257

Conread position: 214-548
Cow position: chrX:46291023-46291364 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 222
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 105, 14

Conread position: 214-559
Cow position: chrX:24331662-24332012 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 229

Conread position: 215-487
Cow position: chrX:29194119-29194400 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 64

Conread position: 216-563
Cow position: chrX:42927933-42927591 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 246

Conread position: 221-579
Cow position: chrX:29229901-29230260 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 89

Conread position: 234-444
Cow position: chrX:11851765-11851554 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 151, 87

Conread position: 234-563
Cow position: chrX:12095870-12095532 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 9, 234

Conread position: 236-563
Cow position: chrX:47345240-47345566 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 94, 201

Conread position: 238-542
Cow position: chrX:1466069-1466380 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 227

Conread position: 238-561
Cow position: chrX:33654933-33654607 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 193

Conread position: 239-559
Cow position: chrX:29050156-29050476 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 170

Conread position: 250-555
Cow position: chrX:22115397-22115084 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 13, 214

Conread position: 269-560
Cow position: chrX:5134414-5134712 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 209
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 82

Conread position: 276-563
Cow position: chrX:35985764-35986053 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 107

Conread position: 278-550
Cow position: chrX:20957196-20957464 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 122, 48

Conread position: 282-542
Cow position: chrX:22393034-22392771 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 174

Conread position: 299-563
Cow position: chrX:39290339-39290593 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 26

Conread position: 304-559
Cow position: chrX:28940219-28940478 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 174

Conread position: 314-561
Cow position: chrX:40532050-40531786 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 318-550
Cow position: chrX:16836289-16836068 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 84, 69

Conread position: 319-544
Cow position: chrX:27668960-27668743 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 79, 136

Conread position: 326-561
Cow position: chrX:2935962-2936189 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 74, 129

Conread position: 326-564
Cow position: chrX:6599777-6599535 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 67, 144

Conread position: 331-562
Cow position: chrX:38301819-38302052 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 49

Conread position: 332-559
Cow position: chrX:29467767-29467549 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 68, 116

Conread position: 337-539
Cow position: chrX:47079643-47079841 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 118

Conread position: 337-561
Cow position: chrX:31479987-31480205 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 207, 60

Conread position: 339-559
Cow position: chrX:34508562-34508794 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 176

Conread position: 351-559
Cow position: chrX:8326934-8327138 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 107

Conread position: 356-563
Cow position: chrX:34991399-34991604 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 99

Conread position: 378-589
Cow position: chrX:31983528-31983312 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 81

Conread position: 397-542
Cow position: chrX:13785144-13784995 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 0

Show alignments to all cow chromosomes.