Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003L14.3 |
| Conread position: | 133-666 |
| Cow position: | chr13:39930663-39931196 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 23 |
| Conread position: | 133-762 |
| Cow position: | chr13:22124860-22125490 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 380 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 27 |
| Conread position: | 133-762 |
| Cow position: | chr13:24162586-24163216 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 375 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 171, 177 |
| Conread position: | 135-573 |
| Cow position: | chr13:56292254-56291825 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 286 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 136-705 |
| Cow position: | chr13:56292337-56291775 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 361 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 39, 31 |
| Conread position: | 136-776 |
| Cow position: | chr13:56292427-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 14 |
| Conread position: | 137-780 |
| Cow position: | chr13:39984003-39984647 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 389 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 138-731 |
| Cow position: | chr13:39930584-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 18 |
| Conread position: | 138-762 |
| Cow position: | chr13:22125033-22125658 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 358 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 140-523 |
| Cow position: | chr13:39984510-39984893 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 33, 22 |
| Conread position: | 140-540 |
| Cow position: | chr13:39984426-39984826 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 141-668 |
| Cow position: | chr13:24163098-24163626 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 277, 310 |
| Conread position: | 141-678 |
| Cow position: | chr13:22125372-22125910 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 300, 285 |
| Conread position: | 141-733 |
| Cow position: | chr13:22124784-22125377 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 345 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 318, 324 |
| Conread position: | 141-733 |
| Cow position: | chr13:24162510-24163103 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 318, 324 |
| Conread position: | 141-736 |
| Cow position: | chr13:56292674-56292083 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 364 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 99 |
| Conread position: | 141-780 |
| Cow position: | chr13:39984259-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 645 |
| Alignm identity: | 384 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 144-735 |
| Cow position: | chr13:56292834-56292241 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 356 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 114, 66 |
| Conread position: | 178-741 |
| Cow position: | chr13:39984212-39984776 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 343 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 370, 397 |
| Conread position: | 179-780 |
| Cow position: | chr13:39984129-39984731 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 361 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 179-780 |
| Cow position: | chr13:56292468-56291871 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 369 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 137, 162 |
| Conread position: | 180-669 |
| Cow position: | chr13:56333778-56334277 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 300 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 168, 135 |
| Conread position: | 185-745 |
| Cow position: | chr13:24163058-24163620 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 327 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 119, 125 |
| Conread position: | 222-733 |
| Cow position: | chr13:22124697-22125209 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 304 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 222-733 |
| Cow position: | chr13:24162423-24162935 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 273-780 |
| Cow position: | chr13:39983971-39984479 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 317 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 309-745 |
| Cow position: | chr13:29183798-29183364 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 269 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 156, 104 |
| Conread position: | 354-776 |
| Cow position: | chr13:56333532-56333955 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 252 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 79, 45 |
Show alignments to all cow chromosomes.