Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8003L14.3
        

               Conread position:
               133-408
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               133-410
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               216, 198
               

               Conread position:
               133-457
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               133-490
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 17
               

               Conread position:
               133-661
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 109
               

               Conread position:
               133-713
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               358
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               134-745
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               367
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               176, 169
               

               Conread position:
               135-780
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 205
               

               Conread position:
               136-536
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               136-540
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 20
               

               Conread position:
               137-530
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               32, 23
               

               Conread position:
               137-545
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               137-741
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               366
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               137-741
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               137-745
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               380
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               27, 13
               

               Conread position:
               137-745
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 13
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 199
               

               Conread position:
               138-493
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               138-540
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               29, 18
               

               Conread position:
               138-660
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               138-735
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               138-742
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               138-743
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               138-743
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               138-748
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               138-755
               

               Cow position:
               
               

               Alignm length:
               624
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               138-774
               

               Cow position:
               
               

               Alignm length:
               644
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               138-778
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               138-779
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 19
               

               Conread position:
               140-653
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               140-709
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               140-743
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               363
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               141-547
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               125, 101
               

               Conread position:
               141-741
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               367
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               141-742
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               366
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               142-776
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               390
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               22, 14
               

               Conread position:
               145-661
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               328
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               145-768
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               363
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 279
               

               Conread position:
               149-414
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               171-745
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 63
               

               Conread position:
               171-745
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               338
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               375, 501
               

               Conread position:
               171-780
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 169
               

               Conread position:
               176-741
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               339
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               5, 390
               

               Conread position:
               179-655
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               303
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               179-730
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               340
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               131, 127
               

               Conread position:
               179-743
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               334
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               154, 161
               

               Conread position:
               179-780
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               180-480
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               160, 151
               

               Conread position:
               180-660
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               366, 384
               

               Conread position:
               180-735
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               130, 124
               

               Conread position:
               180-740
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               343
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               170, 88
               

               Conread position:
               180-741
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               335
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               180-742
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               77, 82
               

               Conread position:
               180-743
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               359
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               75, 61
               

               Conread position:
               180-744
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 124
               

               Conread position:
               180-744
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               239, 271
               

               Conread position:
               180-745
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               346
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               175, 148
               

               Conread position:
               180-780
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               358
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               144, 150
               

               Conread position:
               181-776
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               357
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               30, 20
               

               Conread position:
               187-697
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               152, 144
               

               Conread position:
               187-743
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               308, 329
               

               Conread position:
               187-768
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               349
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               188-741
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               329
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               235, 227
               

               Conread position:
               190-740
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               337
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               315, 48
               

               Conread position:
               192-658
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               74, 67
               

               Conread position:
               194-743
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               338
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               201-741
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               341
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               109, 103
               

               Conread position:
               264-745
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               276-743
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               27, 33
               

               Conread position:
               282-711
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               299-768
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               301
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 36
               

               Conread position:
               309-780
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 18
               

               Conread position:
               339-780
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               348-769
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 62
               

               Conread position:
               351-745
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               415-779
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               234
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               9, 85
               
Show alignments to all cow chromosomes.