Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8003L14.3
        

               Conread position:
               133-494
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               119, 109
               

               Conread position:
               133-500
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               207, 47
               

               Conread position:
               133-535
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               133-741
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               378
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               133-741
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 19
               

               Conread position:
               133-743
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               133-745
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 25
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               653
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 277
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               406
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               402
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               656
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               655
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               133-780
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 17
               

               Conread position:
               134-498
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               134-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               397
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               135-738
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 12
               

               Conread position:
               135-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 10
               

               Conread position:
               135-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 23
               

               Conread position:
               137-447
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 29
               

               Conread position:
               137-618
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               137-707
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               137-739
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 60
               

               Conread position:
               137-741
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               137-745
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               648
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 11
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               652
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 116
               

               Conread position:
               137-780
               

               Cow position:
               
               

               Alignm length:
               654
               

               Alignm identity:
               399
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               31, 19
               

               Conread position:
               138-530
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 19
               

               Conread position:
               138-531
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               252
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 27
               

               Conread position:
               138-651
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               319
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               20, 34
               

               Conread position:
               138-668
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 202
               

               Conread position:
               138-741
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               138-741
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 12
               

               Conread position:
               138-741
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               138-741
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               138-745
               

               Cow position:
               
               

               Alignm length:
               615
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               138-780
               

               Cow position:
               
               

               Alignm length:
               650
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               138-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               138-780
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               141-745
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               141-776
               

               Cow position:
               
               

               Alignm length:
               643
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 185
               

               Conread position:
               145-642
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               313
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               171-627
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 85
               

               Conread position:
               171-776
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 160
               

               Conread position:
               176-707
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               333
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               178-539
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               229
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               162, 58
               

               Conread position:
               179-455
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               160, 152
               

               Conread position:
               179-540
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               179-563
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               362, 0
               

               Conread position:
               179-741
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               180-660
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               293
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               188-780
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               367
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               63, 68
               

               Conread position:
               191-741
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 149
               

               Conread position:
               192-726
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               349, 372
               

               Conread position:
               195-741
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               327
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               197-780
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 218
               

               Conread position:
               198-780
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               200-780
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 41
               

               Conread position:
               252-780
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               97, 25
               

               Conread position:
               261-745
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               150, 163
               

               Conread position:
               273-737
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               271, 62
               

               Conread position:
               274-743
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               267, 316
               

               Conread position:
               275-711
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               275-742
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 13
               

               Conread position:
               340-780
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               212, 80
               

               Conread position:
               352-780
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               196, 238
               
Show alignments to all cow chromosomes.