Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8003L14.3 |
| Conread position: | 133-485 |
| Cow position: | chr2:48689524-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 23 |
| Conread position: | 133-733 |
| Cow position: | chr2:5875081-5874480 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 370 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 115, 124 |
| Conread position: | 133-741 |
| Cow position: | chr2:78754195-78754798 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 109 |
| Conread position: | 133-741 |
| Cow position: | chr2:78754613-78755206 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 33 |
| Conread position: | 133-741 |
| Cow position: | chr2:78754849-78755457 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 198 |
| Conread position: | 133-776 |
| Cow position: | chr2:78755352-78755993 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 133-780 |
| Cow position: | chr2:78755603-78756250 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 74 |
| Conread position: | 134-741 |
| Cow position: | chr2:78755686-78756295 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 135-780 |
| Cow position: | chr2:78755103-78755745 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 234 |
| Conread position: | 135-780 |
| Cow position: | chr2:78755271-78755913 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 136-780 |
| Cow position: | chr2:78754448-78755077 (view UCSC Genome Browser custom track) |
| Alignm length: | 649 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 32 |
| Conread position: | 137-509 |
| Cow position: | chr2:5874489-5874117 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 177, 189 |
| Conread position: | 137-530 |
| Cow position: | chr2:82800051-82800444 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 27, 13 |
| Conread position: | 137-669 |
| Cow position: | chr2:5874657-5874124 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 322 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 129, 112 |
| Conread position: | 137-776 |
| Cow position: | chr2:82799631-82800271 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 137-780 |
| Cow position: | chr2:78754937-78755579 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 98 |
| Conread position: | 137-780 |
| Cow position: | chr2:82799547-82800191 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 397 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 137-780 |
| Cow position: | chr2:86465455-86466099 (view UCSC Genome Browser custom track) |
| Alignm length: | 653 |
| Alignm identity: | 392 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 138-745 |
| Cow position: | chr2:5874740-5874131 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 371 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 138-780 |
| Cow position: | chr2:82799716-82800359 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 34 |
| Conread position: | 138-780 |
| Cow position: | chr2:82799800-82800443 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 139-624 |
| Cow position: | chr2:78755943-78756426 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 26 |
| Conread position: | 139-741 |
| Cow position: | chr2:78755525-78756126 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 8 |
| Conread position: | 140-741 |
| Cow position: | chr2:78754286-78754870 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 141-736 |
| Cow position: | chr2:5874905-5874309 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 367 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 111, 115 |
| Conread position: | 145-745 |
| Cow position: | chr2:82799470-82800073 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 375 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 24, 13 |
| Conread position: | 179-780 |
| Cow position: | chr2:78754811-78755412 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 152 |
| Conread position: | 184-780 |
| Cow position: | chr2:5874946-5874349 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 201-677 |
| Cow position: | chr2:48689540-48689064 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 203-776 |
| Cow position: | chr2:78754100-78754669 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 356 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 217, 33 |
| Conread position: | 204-768 |
| Cow position: | chr2:5875178-5874613 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 330 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 212, 221 |
| Conread position: | 211-735 |
| Cow position: | chr2:82799453-82799978 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 222, 194 |
| Conread position: | 360-780 |
| Cow position: | chr2:78754170-78754589 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 60, 74 |
| Conread position: | 587-780 |
| Cow position: | chr2:82799494-82799687 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.