Cow genome map

Conread name: Ss1.1-Pig4-TMW8003L14.3

Conread position: 1-716
Cow position:
Alignm length: 720
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 409, 115

Conread position: 132-705
Cow position:
Alignm length: 581
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 20

Conread position: 133-457
Cow position:
Alignm length: 327
Alignm identity: 219
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 40, 23

Conread position: 133-490
Cow position:
Alignm length: 360
Alignm identity: 224
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 187, 203

Conread position: 133-522
Cow position:
Alignm length: 394
Alignm identity: 251
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 19

Conread position: 133-530
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 19

Conread position: 133-540
Cow position:
Alignm length: 412
Alignm identity: 264
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 129, 109

Conread position: 133-626
Cow position:
Alignm length: 498
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 23

Conread position: 133-659
Cow position:
Alignm length: 533
Alignm identity: 330
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 129, 122

Conread position: 133-741
Cow position:
Alignm length: 614
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 138

Conread position: 133-776
Cow position:
Alignm length: 651
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 18

Conread position: 133-780
Cow position:
Alignm length: 651
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 19

Conread position: 133-780
Cow position:
Alignm length: 654
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 133-780
Cow position:
Alignm length: 654
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 135-414
Cow position:
Alignm length: 280
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 135-780
Cow position:
Alignm length: 650
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 22

Conread position: 136-780
Cow position:
Alignm length: 655
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 37

Conread position: 137-374
Cow position:
Alignm length: 239
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 202, 191

Conread position: 137-622
Cow position:
Alignm length: 492
Alignm identity: 310
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 27, 19

Conread position: 137-713
Cow position:
Alignm length: 583
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 13

Conread position: 137-713
Cow position:
Alignm length: 582
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 137-737
Cow position:
Alignm length: 606
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 298

Conread position: 137-741
Cow position:
Alignm length: 611
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 299

Conread position: 137-780
Cow position:
Alignm length: 647
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 15

Conread position: 137-780
Cow position:
Alignm length: 649
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 23

Conread position: 137-780
Cow position:
Alignm length: 652
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 137-780
Cow position:
Alignm length: 649
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 15

Conread position: 137-780
Cow position:
Alignm length: 651
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 137-780
Cow position:
Alignm length: 653
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 14

Conread position: 138-522
Cow position:
Alignm length: 390
Alignm identity: 254
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 36, 29

Conread position: 138-614
Cow position:
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 410, 437

Conread position: 138-660
Cow position:
Alignm length: 529
Alignm identity: 332
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 29, 18

Conread position: 138-692
Cow position:
Alignm length: 561
Alignm identity: 347
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 35, 22

Conread position: 138-707
Cow position:
Alignm length: 574
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 22

Conread position: 138-741
Cow position:
Alignm length: 613
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 14

Conread position: 138-741
Cow position:
Alignm length: 607
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 12

Conread position: 138-741
Cow position:
Alignm length: 610
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 138-780
Cow position:
Alignm length: 653
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 42

Conread position: 138-780
Cow position:
Alignm length: 648
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 139-741
Cow position:
Alignm length: 608
Alignm identity: 357
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 103, 125

Conread position: 140-745
Cow position:
Alignm length: 615
Alignm identity: 368
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 33, 19

Conread position: 141-469
Cow position:
Alignm length: 330
Alignm identity: 199
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 15

Conread position: 141-663
Cow position:
Alignm length: 527
Alignm identity: 320
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 31

Conread position: 141-735
Cow position:
Alignm length: 615
Alignm identity: 354
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 32, 9

Conread position: 141-741
Cow position:
Alignm length: 609
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 15

Conread position: 141-780
Cow position:
Alignm length: 650
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 154-780
Cow position:
Alignm length: 638
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 163-780
Cow position:
Alignm length: 640
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 148

Conread position: 171-741
Cow position:
Alignm length: 578
Alignm identity: 351
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 86, 73

Conread position: 177-741
Cow position:
Alignm length: 570
Alignm identity: 333
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 127, 132

Conread position: 177-741
Cow position:
Alignm length: 574
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 151

Conread position: 179-490
Cow position:
Alignm length: 314
Alignm identity: 194
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 9

Conread position: 179-741
Cow position:
Alignm length: 568
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 234

Conread position: 179-741
Cow position:
Alignm length: 566
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 234

Conread position: 179-780
Cow position:
Alignm length: 604
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 479

Conread position: 180-655
Cow position:
Alignm length: 481
Alignm identity: 294
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 84

Conread position: 180-741
Cow position:
Alignm length: 569
Alignm identity: 352
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 117, 129

Conread position: 180-741
Cow position:
Alignm length: 568
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 81

Conread position: 180-741
Cow position:
Alignm length: 569
Alignm identity: 347
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 123, 129

Conread position: 180-741
Cow position:
Alignm length: 566
Alignm identity: 339
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 84

Conread position: 180-780
Cow position:
Alignm length: 603
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 368, 567

Conread position: 181-741
Cow position:
Alignm length: 565
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 65

Conread position: 183-743
Cow position:
Alignm length: 570
Alignm identity: 335
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 65

Conread position: 187-741
Cow position:
Alignm length: 563
Alignm identity: 336
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 74, 54

Conread position: 189-535
Cow position:
Alignm length: 350
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 66

Conread position: 189-780
Cow position:
Alignm length: 597
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 47

Conread position: 198-747
Cow position:
Alignm length: 552
Alignm identity: 336
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 218, 226

Conread position: 204-659
Cow position:
Alignm length: 462
Alignm identity: 286
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 122, 140

Conread position: 204-741
Cow position:
Alignm length: 542
Alignm identity: 328
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 140

Conread position: 227-755
Cow position:
Alignm length: 532
Alignm identity: 310
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 321, 99

Conread position: 372-741
Cow position:
Alignm length: 371
Alignm identity: 220
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 176, 0

Conread position: 420-780
Cow position:
Alignm length: 365
Alignm identity: 228
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 126, 144

Show alignments to all cow chromosomes.